ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01217:01218

Extra

PDB:
ATOM 1 O3' C A1216 12.863 103.037 113.103 1.00 42.22 O
ATOM 2 P G A1217 12.848 102.853 111.507 1.00 41.98 P
ATOM 3 OP1 G A1217 12.540 104.191 110.963 1.00 40.98 O
ATOM 4 OP2 G A1217 12.006 101.695 111.124 1.00 40.45 O
ATOM 5 O5' G A1217 14.354 102.481 111.141 1.00 43.83 O
ATOM 6 C5' G A1217 15.443 103.397 111.382 1.00 40.14 C
ATOM 7 C4' G A1217 16.759 102.715 111.090 1.00 40.20 C
ATOM 8 O4' G A1217 16.974 101.645 112.048 1.00 39.01 O
ATOM 9 C3' G A1217 16.812 102.044 109.726 1.00 40.87 C
ATOM 10 O3' G A1217 17.203 102.987 108.720 1.00 42.47 O
ATOM 11 C2' G A1217 17.819 100.915 109.940 1.00 40.30 C
ATOM 12 O2' G A1217 19.160 101.337 109.869 1.00 41.70 O
ATOM 13 C1' G A1217 17.527 100.511 111.390 1.00 40.15 C
ATOM 14 N9 G A1217 16.588 99.399 111.516 1.00 38.91 N
ATOM 15 C8 G A1217 15.216 99.472 111.470 1.00 39.27 C
ATOM 16 N7 G A1217 14.635 98.310 111.598 1.00 40.83 N
ATOM 17 C5 G A1217 15.682 97.414 111.744 1.00 40.21 C
ATOM 18 C6 G A1217 15.665 96.003 111.924 1.00 42.50 C
ATOM 19 O6 G A1217 14.688 95.241 111.977 1.00 46.11 O
ATOM 20 N1 G A1217 16.950 95.486 112.039 1.00 41.32 N
ATOM 21 C2 G A1217 18.105 96.223 111.976 1.00 40.43 C
ATOM 22 N2 G A1217 19.247 95.530 112.108 1.00 39.60 N
ATOM 23 N3 G A1217 18.138 97.540 111.800 1.00 40.24 N
ATOM 24 C4 G A1217 16.897 98.066 111.697 1.00 40.47 C
ATOM 25 P A A1218 16.549 102.914 107.250 1.00 40.62 P
ATOM 26 OP1 A A1218 16.672 104.259 106.636 1.00 44.73 O
ATOM 27 OP2 A A1218 15.215 102.275 107.330 1.00 45.29 O
ATOM 28 O5' A A1218 17.503 101.913 106.469 1.00 40.74 O
TER

ATOM 1 O3' G B1217 17.203 102.987 108.720 1.00 42.47 O
ATOM 2 P A B1218 16.549 102.914 107.250 1.00 40.62 P
ATOM 3 OP1 A B1218 16.672 104.259 106.636 1.00 44.73 O
ATOM 4 OP2 A B1218 15.215 102.275 107.330 1.00 45.29 O
ATOM 5 O5' A B1218 17.503 101.913 106.469 1.00 40.74 O
ATOM 6 C5' A B1218 17.072 101.306 105.253 1.00 39.43 C
ATOM 7 C4' A B1218 18.219 101.208 104.280 1.00 38.18 C
ATOM 8 O4' A B1218 19.261 100.355 104.823 1.00 36.80 O
ATOM 9 C3' A B1218 17.830 100.556 102.967 1.00 37.69 C
ATOM 10 O3' A B1218 17.294 101.545 102.098 1.00 38.27 O
ATOM 11 C2' A B1218 19.151 99.977 102.485 1.00 37.04 C
ATOM 12 O2' A B1218 19.986 100.964 101.921 1.00 37.47 O
ATOM 13 C1' A B1218 19.772 99.512 103.804 1.00 36.18 C
ATOM 14 N9 A B1218 19.450 98.128 104.161 1.00 37.00 N
ATOM 15 C8 A B1218 18.376 97.688 104.892 1.00 37.19 C
ATOM 16 N7 A B1218 18.358 96.391 105.077 1.00 38.96 N
ATOM 17 C5 A B1218 19.488 95.942 104.418 1.00 37.00 C
ATOM 18 C6 A B1218 20.027 94.660 104.240 1.00 39.17 C
ATOM 19 N6 A B1218 19.479 93.543 104.738 1.00 39.96 N
ATOM 20 N1 A B1218 21.169 94.554 103.525 1.00 40.19 N
ATOM 21 C2 A B1218 21.718 95.667 103.033 1.00 39.49 C
ATOM 22 N3 A B1218 21.307 96.929 103.135 1.00 38.99 N
ATOM 23 C4 A B1218 20.172 96.999 103.846 1.00 37.99 C
ATOM 24 P G B1219 16.076 101.185 101.115 1.00 37.46 P
ATOM 25 OP1 G B1219 15.438 102.480 100.754 1.00 38.91 O
ATOM 26 OP2 G B1219 15.261 100.105 101.732 1.00 40.67 O
ATOM 27 O5' G B1219 16.775 100.590 99.817 1.00 35.21 O
TER

Atoms:
OP1: (12.540,104.191,110.963)
OP2: (12.006,101.695,111.124)
C3': (16.812,102.044,109.726)
C1': (17.527,100.511,111.390)
C5': (15.443,103.397,111.382)
O6: (14.688,95.241,111.977)
O4': (16.974,101.645,112.048)
C8: (15.216,99.472,111.470)
C2: (18.105,96.223,111.976)
C6: (15.665,96.003,111.924)
C5: (15.682,97.414,111.744)
C4: (16.897,98.066,111.697)
P: (12.848,102.853,111.507)
C4': (16.759,102.715,111.090)
C2': (17.819,100.915,109.940)
O2': (19.160,101.337,109.869)
N1: (16.950,95.486,112.039)
N2: (19.247,95.530,112.108)
N3: (18.138,97.540,111.800)
N7: (14.635,98.310,111.598)
N9: (16.588,99.399,111.516)
O5': (14.354,102.481,111.141)
O3': (17.203,102.987,108.720)
OP1: (16.672,104.259,106.636)
OP2: (15.215,102.275,107.330)
C3': (17.830,100.556,102.967)
C1': (19.772,99.512,103.804)
C5': (17.072,101.306,105.253)
O4': (19.261,100.355,104.823)
C8: (18.376,97.688,104.892)
O2': (19.986,100.964,101.921)
C6: (20.027,94.660,104.240)
C5: (19.488,95.942,104.418)
C4: (20.172,96.999,103.846)
P: (16.549,102.914,107.250)
C4': (18.219,101.208,104.280)
C2': (19.151,99.977,102.485)
C2: (21.718,95.667,103.033)
N1: (21.169,94.554,103.525)
N3: (21.307,96.929,103.135)
N6: (19.479,93.543,104.738)
N7: (18.358,96.391,105.077)
N9: (19.450,98.128,104.161)
O5': (17.503,101.913,106.469)
O3': (17.294,101.545,102.098)
Image (generated by PyMOL):
PyMOL image
show in jmol