Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0519:0520
Extra
PDB:
ATOM 1 O3' C A 518 16.978 135.658 103.681 1.00 40.20 O
ATOM 2 P G A 519 16.707 136.728 104.851 1.00 42.93 P
ATOM 3 OP1 G A 519 16.489 135.943 106.092 1.00 43.87 O
ATOM 4 OP2 G A 519 15.680 137.702 104.402 1.00 38.41 O
ATOM 5 O5' G A 519 18.085 137.515 105.004 1.00 43.37 O
ATOM 6 C5' G A 519 19.325 136.814 105.235 1.00 41.77 C
ATOM 7 C4' G A 519 20.498 137.749 105.040 1.00 41.39 C
ATOM 8 O4' G A 519 20.527 138.232 103.668 1.00 40.65 O
ATOM 9 C3' G A 519 20.476 139.020 105.873 1.00 39.79 C
ATOM 10 O3' G A 519 20.968 138.767 107.180 1.00 38.57 O
ATOM 11 C2' G A 519 21.394 139.938 105.078 1.00 41.32 C
ATOM 12 O2' G A 519 22.766 139.664 105.292 1.00 43.11 O
ATOM 13 C1' G A 519 21.022 139.562 103.643 1.00 39.82 C
ATOM 14 N9 G A 519 19.984 140.433 103.104 1.00 41.29 N
ATOM 15 C8 G A 519 18.629 140.204 103.086 1.00 42.45 C
ATOM 16 N7 G A 519 17.951 141.187 102.560 1.00 44.63 N
ATOM 17 C5 G A 519 18.917 142.118 102.204 1.00 44.04 C
ATOM 18 C6 G A 519 18.785 143.393 101.597 1.00 45.27 C
ATOM 19 O6 G A 519 17.756 143.973 101.238 1.00 48.47 O
ATOM 20 N1 G A 519 20.021 144.003 101.415 1.00 44.98 N
ATOM 21 C2 G A 519 21.229 143.456 101.765 1.00 44.38 C
ATOM 22 N2 G A 519 22.317 144.193 101.498 1.00 43.70 N
ATOM 23 N3 G A 519 21.364 142.270 102.336 1.00 44.92 N
ATOM 24 C4 G A 519 20.176 141.663 102.526 1.00 43.16 C
ATOM 25 P A A 520 20.755 139.853 108.348 1.00 37.27 P
ATOM 26 OP1 A A 520 20.482 139.062 109.574 1.00 38.02 O
ATOM 27 OP2 A A 520 19.783 140.870 107.909 1.00 36.30 O
ATOM 28 O5' A A 520 22.185 140.543 108.492 1.00 38.01 O
TER
ATOM 1 O3' G B 519 20.968 138.767 107.180 1.00 38.57 O
ATOM 2 P A B 520 20.755 139.853 108.348 1.00 37.27 P
ATOM 3 OP1 A B 520 20.482 139.062 109.574 1.00 38.02 O
ATOM 4 OP2 A B 520 19.783 140.870 107.909 1.00 36.30 O
ATOM 5 O5' A B 520 22.185 140.543 108.492 1.00 38.01 O
ATOM 6 C5' A B 520 23.380 139.742 108.640 1.00 35.02 C
ATOM 7 C4' A B 520 24.538 140.596 109.101 1.00 34.04 C
ATOM 8 O4' A B 520 24.732 141.677 108.161 1.00 33.97 O
ATOM 9 C3' A B 520 24.365 141.306 110.434 1.00 33.28 C
ATOM 10 O3' A B 520 24.762 140.434 111.482 1.00 32.64 O
ATOM 11 C2' A B 520 25.368 142.452 110.325 1.00 34.26 C
ATOM 12 O2' A B 520 26.689 142.055 110.627 1.00 35.42 O
ATOM 13 C1' A B 520 25.309 142.780 108.833 1.00 32.86 C
ATOM 14 N9 A B 520 24.559 143.976 108.475 1.00 33.20 N
ATOM 15 C8 A B 520 23.243 144.060 108.120 1.00 33.18 C
ATOM 16 N7 A B 520 22.861 145.267 107.788 1.00 35.53 N
ATOM 17 C5 A B 520 24.002 146.033 107.947 1.00 35.28 C
ATOM 18 C6 A B 520 24.257 147.390 107.738 1.00 35.42 C
ATOM 19 N6 A B 520 23.344 148.249 107.284 1.00 37.67 N
ATOM 20 N1 A B 520 25.499 147.842 108.003 1.00 35.30 N
ATOM 21 C2 A B 520 26.418 146.974 108.437 1.00 35.03 C
ATOM 22 N3 A B 520 26.303 145.670 108.658 1.00 35.47 N
ATOM 23 C4 A B 520 25.053 145.255 108.391 1.00 35.12 C
ATOM 24 P U B 521 23.696 139.928 112.566 1.00 31.72 P
ATOM 25 OP1 U B 521 22.430 139.557 111.902 1.00 34.44 O
ATOM 26 OP2 U B 521 23.689 140.928 113.650 1.00 30.85 O
ATOM 27 O5' U B 521 24.342 138.574 113.096 1.00 33.26 O
TER
ATOM 2 P G A 519 16.707 136.728 104.851 1.00 42.93 P
ATOM 3 OP1 G A 519 16.489 135.943 106.092 1.00 43.87 O
ATOM 4 OP2 G A 519 15.680 137.702 104.402 1.00 38.41 O
ATOM 5 O5' G A 519 18.085 137.515 105.004 1.00 43.37 O
ATOM 6 C5' G A 519 19.325 136.814 105.235 1.00 41.77 C
ATOM 7 C4' G A 519 20.498 137.749 105.040 1.00 41.39 C
ATOM 8 O4' G A 519 20.527 138.232 103.668 1.00 40.65 O
ATOM 9 C3' G A 519 20.476 139.020 105.873 1.00 39.79 C
ATOM 10 O3' G A 519 20.968 138.767 107.180 1.00 38.57 O
ATOM 11 C2' G A 519 21.394 139.938 105.078 1.00 41.32 C
ATOM 12 O2' G A 519 22.766 139.664 105.292 1.00 43.11 O
ATOM 13 C1' G A 519 21.022 139.562 103.643 1.00 39.82 C
ATOM 14 N9 G A 519 19.984 140.433 103.104 1.00 41.29 N
ATOM 15 C8 G A 519 18.629 140.204 103.086 1.00 42.45 C
ATOM 16 N7 G A 519 17.951 141.187 102.560 1.00 44.63 N
ATOM 17 C5 G A 519 18.917 142.118 102.204 1.00 44.04 C
ATOM 18 C6 G A 519 18.785 143.393 101.597 1.00 45.27 C
ATOM 19 O6 G A 519 17.756 143.973 101.238 1.00 48.47 O
ATOM 20 N1 G A 519 20.021 144.003 101.415 1.00 44.98 N
ATOM 21 C2 G A 519 21.229 143.456 101.765 1.00 44.38 C
ATOM 22 N2 G A 519 22.317 144.193 101.498 1.00 43.70 N
ATOM 23 N3 G A 519 21.364 142.270 102.336 1.00 44.92 N
ATOM 24 C4 G A 519 20.176 141.663 102.526 1.00 43.16 C
ATOM 25 P A A 520 20.755 139.853 108.348 1.00 37.27 P
ATOM 26 OP1 A A 520 20.482 139.062 109.574 1.00 38.02 O
ATOM 27 OP2 A A 520 19.783 140.870 107.909 1.00 36.30 O
ATOM 28 O5' A A 520 22.185 140.543 108.492 1.00 38.01 O
TER
ATOM 1 O3' G B 519 20.968 138.767 107.180 1.00 38.57 O
ATOM 2 P A B 520 20.755 139.853 108.348 1.00 37.27 P
ATOM 3 OP1 A B 520 20.482 139.062 109.574 1.00 38.02 O
ATOM 4 OP2 A B 520 19.783 140.870 107.909 1.00 36.30 O
ATOM 5 O5' A B 520 22.185 140.543 108.492 1.00 38.01 O
ATOM 6 C5' A B 520 23.380 139.742 108.640 1.00 35.02 C
ATOM 7 C4' A B 520 24.538 140.596 109.101 1.00 34.04 C
ATOM 8 O4' A B 520 24.732 141.677 108.161 1.00 33.97 O
ATOM 9 C3' A B 520 24.365 141.306 110.434 1.00 33.28 C
ATOM 10 O3' A B 520 24.762 140.434 111.482 1.00 32.64 O
ATOM 11 C2' A B 520 25.368 142.452 110.325 1.00 34.26 C
ATOM 12 O2' A B 520 26.689 142.055 110.627 1.00 35.42 O
ATOM 13 C1' A B 520 25.309 142.780 108.833 1.00 32.86 C
ATOM 14 N9 A B 520 24.559 143.976 108.475 1.00 33.20 N
ATOM 15 C8 A B 520 23.243 144.060 108.120 1.00 33.18 C
ATOM 16 N7 A B 520 22.861 145.267 107.788 1.00 35.53 N
ATOM 17 C5 A B 520 24.002 146.033 107.947 1.00 35.28 C
ATOM 18 C6 A B 520 24.257 147.390 107.738 1.00 35.42 C
ATOM 19 N6 A B 520 23.344 148.249 107.284 1.00 37.67 N
ATOM 20 N1 A B 520 25.499 147.842 108.003 1.00 35.30 N
ATOM 21 C2 A B 520 26.418 146.974 108.437 1.00 35.03 C
ATOM 22 N3 A B 520 26.303 145.670 108.658 1.00 35.47 N
ATOM 23 C4 A B 520 25.053 145.255 108.391 1.00 35.12 C
ATOM 24 P U B 521 23.696 139.928 112.566 1.00 31.72 P
ATOM 25 OP1 U B 521 22.430 139.557 111.902 1.00 34.44 O
ATOM 26 OP2 U B 521 23.689 140.928 113.650 1.00 30.85 O
ATOM 27 O5' U B 521 24.342 138.574 113.096 1.00 33.26 O
TER
Atoms:
OP1: (16.489,135.943,106.092)
OP2: (15.680,137.702,104.402)
C3': (20.476,139.020,105.873)
C1': (21.022,139.562,103.643)
C5': (19.325,136.814,105.235)
O6: (17.756,143.973,101.238)
O4': (20.527,138.232,103.668)
C8: (18.629,140.204,103.086)
C2: (21.229,143.456,101.765)
C6: (18.785,143.393,101.597)
C5: (18.917,142.118,102.204)
C4: (20.176,141.663,102.526)
P: (16.707,136.728,104.851)
C4': (20.498,137.749,105.040)
C2': (21.394,139.938,105.078)
O2': (22.766,139.664,105.292)
N1: (20.021,144.003,101.415)
N2: (22.317,144.193,101.498)
N3: (21.364,142.270,102.336)
N7: (17.951,141.187,102.560)
N9: (19.984,140.433,103.104)
O5': (18.085,137.515,105.004)
O3': (20.968,138.767,107.180)
OP2: (15.680,137.702,104.402)
C3': (20.476,139.020,105.873)
C1': (21.022,139.562,103.643)
C5': (19.325,136.814,105.235)
O6: (17.756,143.973,101.238)
O4': (20.527,138.232,103.668)
C8: (18.629,140.204,103.086)
C2: (21.229,143.456,101.765)
C6: (18.785,143.393,101.597)
C5: (18.917,142.118,102.204)
C4: (20.176,141.663,102.526)
P: (16.707,136.728,104.851)
C4': (20.498,137.749,105.040)
C2': (21.394,139.938,105.078)
O2': (22.766,139.664,105.292)
N1: (20.021,144.003,101.415)
N2: (22.317,144.193,101.498)
N3: (21.364,142.270,102.336)
N7: (17.951,141.187,102.560)
N9: (19.984,140.433,103.104)
O5': (18.085,137.515,105.004)
O3': (20.968,138.767,107.180)
OP1: (20.482,139.062,109.574)
OP2: (19.783,140.870,107.909)
C3': (24.365,141.306,110.434)
C1': (25.309,142.780,108.833)
C5': (23.380,139.742,108.640)
O4': (24.732,141.677,108.161)
C8: (23.243,144.060,108.120)
O2': (26.689,142.055,110.627)
C6: (24.257,147.390,107.738)
C5: (24.002,146.033,107.947)
C4: (25.053,145.255,108.391)
P: (20.755,139.853,108.348)
C4': (24.538,140.596,109.101)
C2': (25.368,142.452,110.325)
C2: (26.418,146.974,108.437)
N1: (25.499,147.842,108.003)
N3: (26.303,145.670,108.658)
N6: (23.344,148.249,107.284)
N7: (22.861,145.267,107.788)
N9: (24.559,143.976,108.475)
O5': (22.185,140.543,108.492)
O3': (24.762,140.434,111.482)
OP2: (19.783,140.870,107.909)
C3': (24.365,141.306,110.434)
C1': (25.309,142.780,108.833)
C5': (23.380,139.742,108.640)
O4': (24.732,141.677,108.161)
C8: (23.243,144.060,108.120)
O2': (26.689,142.055,110.627)
C6: (24.257,147.390,107.738)
C5: (24.002,146.033,107.947)
C4: (25.053,145.255,108.391)
P: (20.755,139.853,108.348)
C4': (24.538,140.596,109.101)
C2': (25.368,142.452,110.325)
C2: (26.418,146.974,108.437)
N1: (25.499,147.842,108.003)
N3: (26.303,145.670,108.658)
N6: (23.344,148.249,107.284)
N7: (22.861,145.267,107.788)
N9: (24.559,143.976,108.475)
O5': (22.185,140.543,108.492)
O3': (24.762,140.434,111.482)
Image (generated by PyMOL):