Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1193:A2012
Extra
PDB:
ATOM 1 O3' A A1192 53.368 121.840 123.230 1.00 33.47 O
ATOM 2 P U A1193 53.036 122.420 121.772 1.00 32.36 P
ATOM 3 OP1 U A1193 52.225 121.464 121.014 1.00 31.06 O
ATOM 4 OP2 U A1193 54.175 123.096 121.126 1.00 31.97 O
ATOM 5 O5' U A1193 52.037 123.577 122.144 1.00 34.33 O
ATOM 6 C5' U A1193 52.419 124.634 123.012 1.00 35.16 C
ATOM 7 C4' U A1193 51.333 125.660 122.997 1.00 36.11 C
ATOM 8 O4' U A1193 51.017 125.991 121.613 1.00 37.77 O
ATOM 9 C3' U A1193 50.028 125.155 123.580 1.00 36.37 C
ATOM 10 O3' U A1193 49.330 126.300 124.018 1.00 37.51 O
ATOM 11 C2' U A1193 49.314 124.585 122.362 1.00 37.11 C
ATOM 12 O2' U A1193 47.926 124.513 122.566 1.00 36.48 O
ATOM 13 C1' U A1193 49.668 125.650 121.330 1.00 38.74 C
ATOM 14 N1 U A1193 49.569 125.299 119.904 1.00 39.03 N
ATOM 15 C2 U A1193 48.645 125.980 119.133 1.00 39.47 C
ATOM 16 O2 U A1193 47.886 126.833 119.592 1.00 39.22 O
ATOM 17 N3 U A1193 48.642 125.638 117.805 1.00 38.43 N
ATOM 18 C4 U A1193 49.436 124.720 117.185 1.00 38.14 C
ATOM 19 O4 U A1193 49.288 124.514 115.987 1.00 37.84 O
ATOM 20 C5 U A1193 50.354 124.052 118.041 1.00 39.01 C
ATOM 21 C6 U A1193 50.384 124.350 119.343 1.00 38.88 C
ATOM 22 P G A1194 48.899 126.425 125.543 1.00 40.07 P
ATOM 23 OP1 G A1194 48.228 127.743 125.729 1.00 38.23 O
ATOM 24 OP2 G A1194 50.066 126.049 126.389 1.00 38.26 O
ATOM 25 O5' G A1194 47.762 125.332 125.678 1.00 37.20 O
TER
ATOM 1 O3' C B2011 44.677 128.393 116.298 1.00 28.64 O
ATOM 2 P C B2012 45.430 126.989 116.176 1.00 28.10 P
ATOM 3 OP1 C B2012 46.787 127.189 116.652 1.00 29.11 O
ATOM 4 OP2 C B2012 45.190 126.414 114.838 1.00 23.85 O
ATOM 5 O5' C B2012 44.709 126.077 117.244 1.00 26.60 O
ATOM 6 C5' C B2012 44.778 126.383 118.624 1.00 29.93 C
ATOM 7 C4' C B2012 44.018 125.353 119.389 1.00 32.49 C
ATOM 8 O4' C B2012 42.644 125.330 118.941 1.00 34.54 O
ATOM 9 C3' C B2012 44.538 123.957 119.139 1.00 33.02 C
ATOM 10 O3' C B2012 45.622 123.703 120.018 1.00 31.62 O
ATOM 11 C2' C B2012 43.319 123.088 119.392 1.00 35.17 C
ATOM 12 O2' C B2012 43.197 122.770 120.763 1.00 37.82 O
ATOM 13 C1' C B2012 42.177 124.003 118.939 1.00 34.82 C
ATOM 14 N1 C B2012 41.641 123.689 117.610 1.00 34.21 N
ATOM 15 C2 C B2012 40.652 122.726 117.528 1.00 34.65 C
ATOM 16 O2 C B2012 40.289 122.179 118.561 1.00 36.14 O
ATOM 17 N3 C B2012 40.117 122.414 116.331 1.00 34.77 N
ATOM 18 C4 C B2012 40.549 123.035 115.234 1.00 35.95 C
ATOM 19 N4 C B2012 39.990 122.699 114.078 1.00 34.48 N
ATOM 20 C5 C B2012 41.577 124.032 115.284 1.00 35.58 C
ATOM 21 C6 C B2012 42.090 124.321 116.483 1.00 34.61 C
ATOM 22 P A B2013 46.569 122.436 119.776 1.00 31.74 P
ATOM 23 OP1 A B2013 47.521 122.429 120.899 1.00 28.81 O
ATOM 24 OP2 A B2013 47.064 122.475 118.397 1.00 28.09 O
ATOM 25 O5' A B2013 45.585 121.196 119.887 1.00 31.16 O
TER
ATOM 2 P U A1193 53.036 122.420 121.772 1.00 32.36 P
ATOM 3 OP1 U A1193 52.225 121.464 121.014 1.00 31.06 O
ATOM 4 OP2 U A1193 54.175 123.096 121.126 1.00 31.97 O
ATOM 5 O5' U A1193 52.037 123.577 122.144 1.00 34.33 O
ATOM 6 C5' U A1193 52.419 124.634 123.012 1.00 35.16 C
ATOM 7 C4' U A1193 51.333 125.660 122.997 1.00 36.11 C
ATOM 8 O4' U A1193 51.017 125.991 121.613 1.00 37.77 O
ATOM 9 C3' U A1193 50.028 125.155 123.580 1.00 36.37 C
ATOM 10 O3' U A1193 49.330 126.300 124.018 1.00 37.51 O
ATOM 11 C2' U A1193 49.314 124.585 122.362 1.00 37.11 C
ATOM 12 O2' U A1193 47.926 124.513 122.566 1.00 36.48 O
ATOM 13 C1' U A1193 49.668 125.650 121.330 1.00 38.74 C
ATOM 14 N1 U A1193 49.569 125.299 119.904 1.00 39.03 N
ATOM 15 C2 U A1193 48.645 125.980 119.133 1.00 39.47 C
ATOM 16 O2 U A1193 47.886 126.833 119.592 1.00 39.22 O
ATOM 17 N3 U A1193 48.642 125.638 117.805 1.00 38.43 N
ATOM 18 C4 U A1193 49.436 124.720 117.185 1.00 38.14 C
ATOM 19 O4 U A1193 49.288 124.514 115.987 1.00 37.84 O
ATOM 20 C5 U A1193 50.354 124.052 118.041 1.00 39.01 C
ATOM 21 C6 U A1193 50.384 124.350 119.343 1.00 38.88 C
ATOM 22 P G A1194 48.899 126.425 125.543 1.00 40.07 P
ATOM 23 OP1 G A1194 48.228 127.743 125.729 1.00 38.23 O
ATOM 24 OP2 G A1194 50.066 126.049 126.389 1.00 38.26 O
ATOM 25 O5' G A1194 47.762 125.332 125.678 1.00 37.20 O
TER
ATOM 1 O3' C B2011 44.677 128.393 116.298 1.00 28.64 O
ATOM 2 P C B2012 45.430 126.989 116.176 1.00 28.10 P
ATOM 3 OP1 C B2012 46.787 127.189 116.652 1.00 29.11 O
ATOM 4 OP2 C B2012 45.190 126.414 114.838 1.00 23.85 O
ATOM 5 O5' C B2012 44.709 126.077 117.244 1.00 26.60 O
ATOM 6 C5' C B2012 44.778 126.383 118.624 1.00 29.93 C
ATOM 7 C4' C B2012 44.018 125.353 119.389 1.00 32.49 C
ATOM 8 O4' C B2012 42.644 125.330 118.941 1.00 34.54 O
ATOM 9 C3' C B2012 44.538 123.957 119.139 1.00 33.02 C
ATOM 10 O3' C B2012 45.622 123.703 120.018 1.00 31.62 O
ATOM 11 C2' C B2012 43.319 123.088 119.392 1.00 35.17 C
ATOM 12 O2' C B2012 43.197 122.770 120.763 1.00 37.82 O
ATOM 13 C1' C B2012 42.177 124.003 118.939 1.00 34.82 C
ATOM 14 N1 C B2012 41.641 123.689 117.610 1.00 34.21 N
ATOM 15 C2 C B2012 40.652 122.726 117.528 1.00 34.65 C
ATOM 16 O2 C B2012 40.289 122.179 118.561 1.00 36.14 O
ATOM 17 N3 C B2012 40.117 122.414 116.331 1.00 34.77 N
ATOM 18 C4 C B2012 40.549 123.035 115.234 1.00 35.95 C
ATOM 19 N4 C B2012 39.990 122.699 114.078 1.00 34.48 N
ATOM 20 C5 C B2012 41.577 124.032 115.284 1.00 35.58 C
ATOM 21 C6 C B2012 42.090 124.321 116.483 1.00 34.61 C
ATOM 22 P A B2013 46.569 122.436 119.776 1.00 31.74 P
ATOM 23 OP1 A B2013 47.521 122.429 120.899 1.00 28.81 O
ATOM 24 OP2 A B2013 47.064 122.475 118.397 1.00 28.09 O
ATOM 25 O5' A B2013 45.585 121.196 119.887 1.00 31.16 O
TER
Atoms:
C4: (49.436,124.720,117.185)
N3: (48.642,125.638,117.805)
OP1: (52.225,121.464,121.014)
OP2: (54.175,123.096,121.126)
C2: (48.645,125.980,119.133)
C1': (49.668,125.650,121.330)
C3': (50.028,125.155,123.580)
O5': (52.037,123.577,122.144)
O4': (51.017,125.991,121.613)
C5': (52.419,124.634,123.012)
P: (53.036,122.420,121.772)
C4': (51.333,125.660,122.997)
C2': (49.314,124.585,122.362)
O2': (47.926,124.513,122.566)
N1: (49.569,125.299,119.904)
O4: (49.288,124.514,115.987)
O2: (47.886,126.833,119.592)
C6: (50.384,124.350,119.343)
C5: (50.354,124.052,118.041)
O3': (49.330,126.300,124.018)
N3: (48.642,125.638,117.805)
OP1: (52.225,121.464,121.014)
OP2: (54.175,123.096,121.126)
C2: (48.645,125.980,119.133)
C1': (49.668,125.650,121.330)
C3': (50.028,125.155,123.580)
O5': (52.037,123.577,122.144)
O4': (51.017,125.991,121.613)
C5': (52.419,124.634,123.012)
P: (53.036,122.420,121.772)
C4': (51.333,125.660,122.997)
C2': (49.314,124.585,122.362)
O2': (47.926,124.513,122.566)
N1: (49.569,125.299,119.904)
O4: (49.288,124.514,115.987)
O2: (47.886,126.833,119.592)
C6: (50.384,124.350,119.343)
C5: (50.354,124.052,118.041)
O3': (49.330,126.300,124.018)
C2: (40.652,122.726,117.528)
OP1: (46.787,127.189,116.652)
OP2: (45.190,126.414,114.838)
C4: (40.549,123.035,115.234)
O5': (44.709,126.077,117.244)
C3': (44.538,123.957,119.139)
C1': (42.177,124.003,118.939)
O4': (42.644,125.330,118.941)
C5': (44.778,126.383,118.624)
P: (45.430,126.989,116.176)
O2: (40.289,122.179,118.561)
C4': (44.018,125.353,119.389)
C2': (43.319,123.088,119.392)
O2': (43.197,122.770,120.763)
N1: (41.641,123.689,117.610)
N3: (40.117,122.414,116.331)
N4: (39.990,122.699,114.078)
C6: (42.090,124.321,116.483)
C5: (41.577,124.032,115.284)
O3': (45.622,123.703,120.018)
OP1: (46.787,127.189,116.652)
OP2: (45.190,126.414,114.838)
C4: (40.549,123.035,115.234)
O5': (44.709,126.077,117.244)
C3': (44.538,123.957,119.139)
C1': (42.177,124.003,118.939)
O4': (42.644,125.330,118.941)
C5': (44.778,126.383,118.624)
P: (45.430,126.989,116.176)
O2: (40.289,122.179,118.561)
C4': (44.018,125.353,119.389)
C2': (43.319,123.088,119.392)
O2': (43.197,122.770,120.763)
N1: (41.641,123.689,117.610)
N3: (40.117,122.414,116.331)
N4: (39.990,122.699,114.078)
C6: (42.090,124.321,116.483)
C5: (41.577,124.032,115.284)
O3': (45.622,123.703,120.018)
Image (generated by PyMOL):