Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2079:A2105
Extra
PDB:
ATOM 1 O3' C A2078 109.355 110.998 32.338 1.00 66.78 O
ATOM 2 P U A2079 110.792 111.023 31.630 1.00 68.37 P
ATOM 3 OP1 U A2079 111.537 112.132 32.253 1.00 68.26 O
ATOM 4 OP2 U A2079 110.600 111.003 30.149 1.00 68.55 O
ATOM 5 O5' U A2079 111.498 109.656 32.052 1.00 67.19 O
ATOM 6 C5' U A2079 112.653 109.179 31.331 1.00 68.58 C
ATOM 7 C4' U A2079 113.351 108.100 32.108 1.00 69.45 C
ATOM 8 O4' U A2079 113.858 108.663 33.341 1.00 68.45 O
ATOM 9 C3' U A2079 112.485 106.905 32.490 1.00 71.20 C
ATOM 10 O3' U A2079 113.286 105.727 32.444 1.00 75.07 O
ATOM 11 C2' U A2079 112.167 107.176 33.955 1.00 70.84 C
ATOM 12 O2' U A2079 111.922 106.000 34.701 1.00 71.38 O
ATOM 13 C1' U A2079 113.461 107.842 34.408 1.00 69.37 C
ATOM 14 N1 U A2079 113.382 108.628 35.648 1.00 69.14 N
ATOM 15 C2 U A2079 113.812 108.013 36.816 1.00 69.34 C
ATOM 16 O2 U A2079 114.127 106.837 36.867 1.00 70.15 O
ATOM 17 N3 U A2079 113.831 108.820 37.921 1.00 68.95 N
ATOM 18 C4 U A2079 113.436 110.133 37.985 1.00 68.94 C
ATOM 19 O4 U A2079 113.675 110.780 39.005 1.00 70.54 O
ATOM 20 C5 U A2079 112.930 110.665 36.759 1.00 67.95 C
ATOM 21 C6 U A2079 112.929 109.917 35.660 1.00 68.47 C
ATOM 22 P G A2080 113.703 105.085 31.029 1.00 76.66 P
ATOM 23 OP1 G A2080 112.676 105.524 30.051 1.00 75.15 O
ATOM 24 OP2 G A2080 113.891 103.604 31.282 1.00 75.62 O
ATOM 25 O5' G A2080 115.121 105.790 30.729 1.00 79.56 O
TER
ATOM 1 O3' A B2104 116.817 108.073 39.570 1.00 76.16 O
ATOM 2 P C B2105 116.074 106.944 40.451 1.00 76.47 P
ATOM 3 OP1 C B2105 116.927 105.712 40.541 1.00 75.93 O
ATOM 4 OP2 C B2105 114.703 106.827 39.892 1.00 74.88 O
ATOM 5 O5' C B2105 115.962 107.644 41.893 1.00 74.76 O
ATOM 6 C5' C B2105 116.877 107.314 42.983 1.00 71.49 C
ATOM 7 C4' C B2105 117.333 108.561 43.749 1.00 68.47 C
ATOM 8 O4' C B2105 118.080 109.438 42.874 1.00 67.09 O
ATOM 9 C3' C B2105 116.325 109.521 44.380 1.00 67.00 C
ATOM 10 O3' C B2105 115.790 109.080 45.617 1.00 66.35 O
ATOM 11 C2' C B2105 117.193 110.738 44.661 1.00 66.18 C
ATOM 12 O2' C B2105 118.001 110.649 45.818 1.00 67.55 O
ATOM 13 C1' C B2105 118.095 110.742 43.435 1.00 65.83 C
ATOM 14 N1 C B2105 117.582 111.695 42.459 1.00 65.07 N
ATOM 15 C2 C B2105 117.772 113.066 42.704 1.00 64.75 C
ATOM 16 O2 C B2105 118.320 113.421 43.764 1.00 62.68 O
ATOM 17 N3 C B2105 117.342 113.960 41.793 1.00 64.84 N
ATOM 18 C4 C B2105 116.730 113.536 40.685 1.00 65.68 C
ATOM 19 N4 C B2105 116.340 114.454 39.800 1.00 65.21 N
ATOM 20 C5 C B2105 116.495 112.148 40.431 1.00 65.60 C
ATOM 21 C6 C B2105 116.935 111.274 41.334 1.00 65.28 C
ATOM 22 P A B2106 114.289 109.482 46.024 1.00 64.85 P
ATOM 23 OP1 A B2106 114.042 108.964 47.391 1.00 65.16 O
ATOM 24 OP2 A B2106 113.411 109.049 44.903 1.00 65.07 O
ATOM 25 O5' A B2106 114.317 111.066 46.121 1.00 62.27 O
TER
ATOM 2 P U A2079 110.792 111.023 31.630 1.00 68.37 P
ATOM 3 OP1 U A2079 111.537 112.132 32.253 1.00 68.26 O
ATOM 4 OP2 U A2079 110.600 111.003 30.149 1.00 68.55 O
ATOM 5 O5' U A2079 111.498 109.656 32.052 1.00 67.19 O
ATOM 6 C5' U A2079 112.653 109.179 31.331 1.00 68.58 C
ATOM 7 C4' U A2079 113.351 108.100 32.108 1.00 69.45 C
ATOM 8 O4' U A2079 113.858 108.663 33.341 1.00 68.45 O
ATOM 9 C3' U A2079 112.485 106.905 32.490 1.00 71.20 C
ATOM 10 O3' U A2079 113.286 105.727 32.444 1.00 75.07 O
ATOM 11 C2' U A2079 112.167 107.176 33.955 1.00 70.84 C
ATOM 12 O2' U A2079 111.922 106.000 34.701 1.00 71.38 O
ATOM 13 C1' U A2079 113.461 107.842 34.408 1.00 69.37 C
ATOM 14 N1 U A2079 113.382 108.628 35.648 1.00 69.14 N
ATOM 15 C2 U A2079 113.812 108.013 36.816 1.00 69.34 C
ATOM 16 O2 U A2079 114.127 106.837 36.867 1.00 70.15 O
ATOM 17 N3 U A2079 113.831 108.820 37.921 1.00 68.95 N
ATOM 18 C4 U A2079 113.436 110.133 37.985 1.00 68.94 C
ATOM 19 O4 U A2079 113.675 110.780 39.005 1.00 70.54 O
ATOM 20 C5 U A2079 112.930 110.665 36.759 1.00 67.95 C
ATOM 21 C6 U A2079 112.929 109.917 35.660 1.00 68.47 C
ATOM 22 P G A2080 113.703 105.085 31.029 1.00 76.66 P
ATOM 23 OP1 G A2080 112.676 105.524 30.051 1.00 75.15 O
ATOM 24 OP2 G A2080 113.891 103.604 31.282 1.00 75.62 O
ATOM 25 O5' G A2080 115.121 105.790 30.729 1.00 79.56 O
TER
ATOM 1 O3' A B2104 116.817 108.073 39.570 1.00 76.16 O
ATOM 2 P C B2105 116.074 106.944 40.451 1.00 76.47 P
ATOM 3 OP1 C B2105 116.927 105.712 40.541 1.00 75.93 O
ATOM 4 OP2 C B2105 114.703 106.827 39.892 1.00 74.88 O
ATOM 5 O5' C B2105 115.962 107.644 41.893 1.00 74.76 O
ATOM 6 C5' C B2105 116.877 107.314 42.983 1.00 71.49 C
ATOM 7 C4' C B2105 117.333 108.561 43.749 1.00 68.47 C
ATOM 8 O4' C B2105 118.080 109.438 42.874 1.00 67.09 O
ATOM 9 C3' C B2105 116.325 109.521 44.380 1.00 67.00 C
ATOM 10 O3' C B2105 115.790 109.080 45.617 1.00 66.35 O
ATOM 11 C2' C B2105 117.193 110.738 44.661 1.00 66.18 C
ATOM 12 O2' C B2105 118.001 110.649 45.818 1.00 67.55 O
ATOM 13 C1' C B2105 118.095 110.742 43.435 1.00 65.83 C
ATOM 14 N1 C B2105 117.582 111.695 42.459 1.00 65.07 N
ATOM 15 C2 C B2105 117.772 113.066 42.704 1.00 64.75 C
ATOM 16 O2 C B2105 118.320 113.421 43.764 1.00 62.68 O
ATOM 17 N3 C B2105 117.342 113.960 41.793 1.00 64.84 N
ATOM 18 C4 C B2105 116.730 113.536 40.685 1.00 65.68 C
ATOM 19 N4 C B2105 116.340 114.454 39.800 1.00 65.21 N
ATOM 20 C5 C B2105 116.495 112.148 40.431 1.00 65.60 C
ATOM 21 C6 C B2105 116.935 111.274 41.334 1.00 65.28 C
ATOM 22 P A B2106 114.289 109.482 46.024 1.00 64.85 P
ATOM 23 OP1 A B2106 114.042 108.964 47.391 1.00 65.16 O
ATOM 24 OP2 A B2106 113.411 109.049 44.903 1.00 65.07 O
ATOM 25 O5' A B2106 114.317 111.066 46.121 1.00 62.27 O
TER
Atoms:
C4: (113.436,110.133,37.985)
N3: (113.831,108.820,37.921)
OP1: (111.537,112.132,32.253)
OP2: (110.600,111.003,30.149)
C2: (113.812,108.013,36.816)
C1': (113.461,107.842,34.408)
C3': (112.485,106.905,32.490)
O5': (111.498,109.656,32.052)
O4': (113.858,108.663,33.341)
C5': (112.653,109.179,31.331)
P: (110.792,111.023,31.630)
C4': (113.351,108.100,32.108)
C2': (112.167,107.176,33.955)
O2': (111.922,106.000,34.701)
N1: (113.382,108.628,35.648)
O4: (113.675,110.780,39.005)
O2: (114.127,106.837,36.867)
C6: (112.929,109.917,35.660)
C5: (112.930,110.665,36.759)
O3': (113.286,105.727,32.444)
N3: (113.831,108.820,37.921)
OP1: (111.537,112.132,32.253)
OP2: (110.600,111.003,30.149)
C2: (113.812,108.013,36.816)
C1': (113.461,107.842,34.408)
C3': (112.485,106.905,32.490)
O5': (111.498,109.656,32.052)
O4': (113.858,108.663,33.341)
C5': (112.653,109.179,31.331)
P: (110.792,111.023,31.630)
C4': (113.351,108.100,32.108)
C2': (112.167,107.176,33.955)
O2': (111.922,106.000,34.701)
N1: (113.382,108.628,35.648)
O4: (113.675,110.780,39.005)
O2: (114.127,106.837,36.867)
C6: (112.929,109.917,35.660)
C5: (112.930,110.665,36.759)
O3': (113.286,105.727,32.444)
C2: (117.772,113.066,42.704)
OP1: (116.927,105.712,40.541)
OP2: (114.703,106.827,39.892)
C4: (116.730,113.536,40.685)
O5': (115.962,107.644,41.893)
C3': (116.325,109.521,44.380)
C1': (118.095,110.742,43.435)
O4': (118.080,109.438,42.874)
C5': (116.877,107.314,42.983)
P: (116.074,106.944,40.451)
O2: (118.320,113.421,43.764)
C4': (117.333,108.561,43.749)
C2': (117.193,110.738,44.661)
O2': (118.001,110.649,45.818)
N1: (117.582,111.695,42.459)
N3: (117.342,113.960,41.793)
N4: (116.340,114.454,39.800)
C6: (116.935,111.274,41.334)
C5: (116.495,112.148,40.431)
O3': (115.790,109.080,45.617)
OP1: (116.927,105.712,40.541)
OP2: (114.703,106.827,39.892)
C4: (116.730,113.536,40.685)
O5': (115.962,107.644,41.893)
C3': (116.325,109.521,44.380)
C1': (118.095,110.742,43.435)
O4': (118.080,109.438,42.874)
C5': (116.877,107.314,42.983)
P: (116.074,106.944,40.451)
O2: (118.320,113.421,43.764)
C4': (117.333,108.561,43.749)
C2': (117.193,110.738,44.661)
O2': (118.001,110.649,45.818)
N1: (117.582,111.695,42.459)
N3: (117.342,113.960,41.793)
N4: (116.340,114.454,39.800)
C6: (116.935,111.274,41.334)
C5: (116.495,112.148,40.431)
O3': (115.790,109.080,45.617)
Image (generated by PyMOL):