Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0519:0520
Extra
PDB:
ATOM 1 O3' C A 518 17.053 136.311 103.540 1.00 50.56 O
ATOM 2 P G A 519 16.736 137.340 104.734 1.00 51.04 P
ATOM 3 OP1 G A 519 16.499 136.524 105.948 1.00 51.26 O
ATOM 4 OP2 G A 519 15.718 138.323 104.296 1.00 49.45 O
ATOM 5 O5' G A 519 18.102 138.121 104.955 1.00 52.52 O
ATOM 6 C5' G A 519 19.322 137.414 105.240 1.00 50.87 C
ATOM 7 C4' G A 519 20.499 138.333 105.053 1.00 50.99 C
ATOM 8 O4' G A 519 20.530 138.809 103.679 1.00 50.86 O
ATOM 9 C3' G A 519 20.443 139.605 105.877 1.00 50.30 C
ATOM 10 O3' G A 519 20.900 139.364 107.200 1.00 49.56 O
ATOM 11 C2' G A 519 21.347 140.538 105.085 1.00 51.74 C
ATOM 12 O2' G A 519 22.718 140.271 105.284 1.00 54.16 O
ATOM 13 C1' G A 519 20.985 140.151 103.652 1.00 51.15 C
ATOM 14 N9 G A 519 19.930 140.990 103.097 1.00 52.77 N
ATOM 15 C8 G A 519 18.581 140.728 103.051 1.00 53.05 C
ATOM 16 N7 G A 519 17.894 141.683 102.486 1.00 54.26 N
ATOM 17 C5 G A 519 18.846 142.632 102.141 1.00 54.86 C
ATOM 18 C6 G A 519 18.703 143.887 101.502 1.00 56.45 C
ATOM 19 O6 G A 519 17.675 144.431 101.095 1.00 60.32 O
ATOM 20 N1 G A 519 19.928 144.526 101.348 1.00 56.70 N
ATOM 21 C2 G A 519 21.137 144.018 101.749 1.00 55.94 C
ATOM 22 N2 G A 519 22.216 144.774 101.494 1.00 55.64 N
ATOM 23 N3 G A 519 21.282 142.852 102.350 1.00 55.38 N
ATOM 24 C4 G A 519 20.105 142.218 102.512 1.00 54.14 C
ATOM 25 P A A 520 20.740 140.503 108.324 1.00 47.99 P
ATOM 26 OP1 A A 520 20.516 139.811 109.622 1.00 46.02 O
ATOM 27 OP2 A A 520 19.759 141.496 107.842 1.00 48.93 O
ATOM 28 O5' A A 520 22.170 141.198 108.355 1.00 46.03 O
TER
ATOM 1 O3' G B 519 20.900 139.364 107.200 1.00 49.56 O
ATOM 2 P A B 520 20.740 140.503 108.324 1.00 47.99 P
ATOM 3 OP1 A B 520 20.516 139.811 109.622 1.00 46.02 O
ATOM 4 OP2 A B 520 19.759 141.496 107.842 1.00 48.93 O
ATOM 5 O5' A B 520 22.170 141.198 108.355 1.00 46.03 O
ATOM 6 C5' A B 520 23.368 140.403 108.371 1.00 42.08 C
ATOM 7 C4' A B 520 24.526 141.224 108.860 1.00 40.68 C
ATOM 8 O4' A B 520 24.686 142.365 107.993 1.00 39.14 O
ATOM 9 C3' A B 520 24.343 141.844 110.232 1.00 40.92 C
ATOM 10 O3' A B 520 24.724 140.897 111.210 1.00 42.15 O
ATOM 11 C2' A B 520 25.321 143.013 110.197 1.00 40.73 C
ATOM 12 O2' A B 520 26.648 142.619 110.472 1.00 41.90 O
ATOM 13 C1' A B 520 25.250 143.430 108.727 1.00 40.42 C
ATOM 14 N9 A B 520 24.498 144.641 108.421 1.00 42.70 N
ATOM 15 C8 A B 520 23.173 144.753 108.102 1.00 41.97 C
ATOM 16 N7 A B 520 22.809 145.967 107.782 1.00 44.32 N
ATOM 17 C5 A B 520 23.969 146.710 107.917 1.00 44.23 C
ATOM 18 C6 A B 520 24.250 148.062 107.700 1.00 45.21 C
ATOM 19 N6 A B 520 23.354 148.939 107.249 1.00 46.72 N
ATOM 20 N1 A B 520 25.506 148.488 107.948 1.00 45.34 N
ATOM 21 C2 A B 520 26.414 147.602 108.367 1.00 44.58 C
ATOM 22 N3 A B 520 26.276 146.300 108.586 1.00 45.01 N
ATOM 23 C4 A B 520 25.012 145.911 108.340 1.00 44.77 C
ATOM 24 P U B 521 23.736 140.546 112.415 1.00 43.16 P
ATOM 25 OP1 U B 521 22.385 140.314 111.851 1.00 43.63 O
ATOM 26 OP2 U B 521 23.938 141.585 113.454 1.00 40.99 O
ATOM 27 O5' U B 521 24.301 139.163 112.967 1.00 43.02 O
TER
ATOM 2 P G A 519 16.736 137.340 104.734 1.00 51.04 P
ATOM 3 OP1 G A 519 16.499 136.524 105.948 1.00 51.26 O
ATOM 4 OP2 G A 519 15.718 138.323 104.296 1.00 49.45 O
ATOM 5 O5' G A 519 18.102 138.121 104.955 1.00 52.52 O
ATOM 6 C5' G A 519 19.322 137.414 105.240 1.00 50.87 C
ATOM 7 C4' G A 519 20.499 138.333 105.053 1.00 50.99 C
ATOM 8 O4' G A 519 20.530 138.809 103.679 1.00 50.86 O
ATOM 9 C3' G A 519 20.443 139.605 105.877 1.00 50.30 C
ATOM 10 O3' G A 519 20.900 139.364 107.200 1.00 49.56 O
ATOM 11 C2' G A 519 21.347 140.538 105.085 1.00 51.74 C
ATOM 12 O2' G A 519 22.718 140.271 105.284 1.00 54.16 O
ATOM 13 C1' G A 519 20.985 140.151 103.652 1.00 51.15 C
ATOM 14 N9 G A 519 19.930 140.990 103.097 1.00 52.77 N
ATOM 15 C8 G A 519 18.581 140.728 103.051 1.00 53.05 C
ATOM 16 N7 G A 519 17.894 141.683 102.486 1.00 54.26 N
ATOM 17 C5 G A 519 18.846 142.632 102.141 1.00 54.86 C
ATOM 18 C6 G A 519 18.703 143.887 101.502 1.00 56.45 C
ATOM 19 O6 G A 519 17.675 144.431 101.095 1.00 60.32 O
ATOM 20 N1 G A 519 19.928 144.526 101.348 1.00 56.70 N
ATOM 21 C2 G A 519 21.137 144.018 101.749 1.00 55.94 C
ATOM 22 N2 G A 519 22.216 144.774 101.494 1.00 55.64 N
ATOM 23 N3 G A 519 21.282 142.852 102.350 1.00 55.38 N
ATOM 24 C4 G A 519 20.105 142.218 102.512 1.00 54.14 C
ATOM 25 P A A 520 20.740 140.503 108.324 1.00 47.99 P
ATOM 26 OP1 A A 520 20.516 139.811 109.622 1.00 46.02 O
ATOM 27 OP2 A A 520 19.759 141.496 107.842 1.00 48.93 O
ATOM 28 O5' A A 520 22.170 141.198 108.355 1.00 46.03 O
TER
ATOM 1 O3' G B 519 20.900 139.364 107.200 1.00 49.56 O
ATOM 2 P A B 520 20.740 140.503 108.324 1.00 47.99 P
ATOM 3 OP1 A B 520 20.516 139.811 109.622 1.00 46.02 O
ATOM 4 OP2 A B 520 19.759 141.496 107.842 1.00 48.93 O
ATOM 5 O5' A B 520 22.170 141.198 108.355 1.00 46.03 O
ATOM 6 C5' A B 520 23.368 140.403 108.371 1.00 42.08 C
ATOM 7 C4' A B 520 24.526 141.224 108.860 1.00 40.68 C
ATOM 8 O4' A B 520 24.686 142.365 107.993 1.00 39.14 O
ATOM 9 C3' A B 520 24.343 141.844 110.232 1.00 40.92 C
ATOM 10 O3' A B 520 24.724 140.897 111.210 1.00 42.15 O
ATOM 11 C2' A B 520 25.321 143.013 110.197 1.00 40.73 C
ATOM 12 O2' A B 520 26.648 142.619 110.472 1.00 41.90 O
ATOM 13 C1' A B 520 25.250 143.430 108.727 1.00 40.42 C
ATOM 14 N9 A B 520 24.498 144.641 108.421 1.00 42.70 N
ATOM 15 C8 A B 520 23.173 144.753 108.102 1.00 41.97 C
ATOM 16 N7 A B 520 22.809 145.967 107.782 1.00 44.32 N
ATOM 17 C5 A B 520 23.969 146.710 107.917 1.00 44.23 C
ATOM 18 C6 A B 520 24.250 148.062 107.700 1.00 45.21 C
ATOM 19 N6 A B 520 23.354 148.939 107.249 1.00 46.72 N
ATOM 20 N1 A B 520 25.506 148.488 107.948 1.00 45.34 N
ATOM 21 C2 A B 520 26.414 147.602 108.367 1.00 44.58 C
ATOM 22 N3 A B 520 26.276 146.300 108.586 1.00 45.01 N
ATOM 23 C4 A B 520 25.012 145.911 108.340 1.00 44.77 C
ATOM 24 P U B 521 23.736 140.546 112.415 1.00 43.16 P
ATOM 25 OP1 U B 521 22.385 140.314 111.851 1.00 43.63 O
ATOM 26 OP2 U B 521 23.938 141.585 113.454 1.00 40.99 O
ATOM 27 O5' U B 521 24.301 139.163 112.967 1.00 43.02 O
TER
Atoms:
OP1: (16.499,136.524,105.948)
OP2: (15.718,138.323,104.296)
C3': (20.443,139.605,105.877)
C1': (20.985,140.151,103.652)
C5': (19.322,137.414,105.240)
O6: (17.675,144.431,101.095)
O4': (20.530,138.809,103.679)
C8: (18.581,140.728,103.051)
C2: (21.137,144.018,101.749)
C6: (18.703,143.887,101.502)
C5: (18.846,142.632,102.141)
C4: (20.105,142.218,102.512)
P: (16.736,137.340,104.734)
C4': (20.499,138.333,105.053)
C2': (21.347,140.538,105.085)
O2': (22.718,140.271,105.284)
N1: (19.928,144.526,101.348)
N2: (22.216,144.774,101.494)
N3: (21.282,142.852,102.350)
N7: (17.894,141.683,102.486)
N9: (19.930,140.990,103.097)
O5': (18.102,138.121,104.955)
O3': (20.900,139.364,107.200)
OP2: (15.718,138.323,104.296)
C3': (20.443,139.605,105.877)
C1': (20.985,140.151,103.652)
C5': (19.322,137.414,105.240)
O6: (17.675,144.431,101.095)
O4': (20.530,138.809,103.679)
C8: (18.581,140.728,103.051)
C2: (21.137,144.018,101.749)
C6: (18.703,143.887,101.502)
C5: (18.846,142.632,102.141)
C4: (20.105,142.218,102.512)
P: (16.736,137.340,104.734)
C4': (20.499,138.333,105.053)
C2': (21.347,140.538,105.085)
O2': (22.718,140.271,105.284)
N1: (19.928,144.526,101.348)
N2: (22.216,144.774,101.494)
N3: (21.282,142.852,102.350)
N7: (17.894,141.683,102.486)
N9: (19.930,140.990,103.097)
O5': (18.102,138.121,104.955)
O3': (20.900,139.364,107.200)
OP1: (20.516,139.811,109.622)
OP2: (19.759,141.496,107.842)
C3': (24.343,141.844,110.232)
C1': (25.250,143.430,108.727)
C5': (23.368,140.403,108.371)
O4': (24.686,142.365,107.993)
C8: (23.173,144.753,108.102)
O2': (26.648,142.619,110.472)
C6: (24.250,148.062,107.700)
C5: (23.969,146.710,107.917)
C4: (25.012,145.911,108.340)
P: (20.740,140.503,108.324)
C4': (24.526,141.224,108.860)
C2': (25.321,143.013,110.197)
C2: (26.414,147.602,108.367)
N1: (25.506,148.488,107.948)
N3: (26.276,146.300,108.586)
N6: (23.354,148.939,107.249)
N7: (22.809,145.967,107.782)
N9: (24.498,144.641,108.421)
O5': (22.170,141.198,108.355)
O3': (24.724,140.897,111.210)
OP2: (19.759,141.496,107.842)
C3': (24.343,141.844,110.232)
C1': (25.250,143.430,108.727)
C5': (23.368,140.403,108.371)
O4': (24.686,142.365,107.993)
C8: (23.173,144.753,108.102)
O2': (26.648,142.619,110.472)
C6: (24.250,148.062,107.700)
C5: (23.969,146.710,107.917)
C4: (25.012,145.911,108.340)
P: (20.740,140.503,108.324)
C4': (24.526,141.224,108.860)
C2': (25.321,143.013,110.197)
C2: (26.414,147.602,108.367)
N1: (25.506,148.488,107.948)
N3: (26.276,146.300,108.586)
N6: (23.354,148.939,107.249)
N7: (22.809,145.967,107.782)
N9: (24.498,144.641,108.421)
O5': (22.170,141.198,108.355)
O3': (24.724,140.897,111.210)
Image (generated by PyMOL):