ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01217:01218

Extra

PDB:
ATOM 1 O3' C A1216 12.768 104.053 112.940 1.00 42.27 O
ATOM 2 P G A1217 12.849 103.856 111.353 1.00 42.08 P
ATOM 3 OP1 G A1217 12.665 105.211 110.780 1.00 40.74 O
ATOM 4 OP2 G A1217 11.962 102.738 110.931 1.00 40.20 O
ATOM 5 O5' G A1217 14.351 103.404 111.088 1.00 44.22 O
ATOM 6 C5' G A1217 15.451 104.321 111.261 1.00 42.53 C
ATOM 7 C4' G A1217 16.746 103.618 110.954 1.00 42.95 C
ATOM 8 O4' G A1217 16.941 102.540 111.906 1.00 43.79 O
ATOM 9 C3' G A1217 16.765 102.946 109.591 1.00 42.53 C
ATOM 10 O3' G A1217 17.162 103.885 108.597 1.00 41.37 O
ATOM 11 C2' G A1217 17.760 101.809 109.790 1.00 43.00 C
ATOM 12 O2' G A1217 19.099 102.247 109.686 1.00 43.94 O
ATOM 13 C1' G A1217 17.472 101.406 111.242 1.00 43.40 C
ATOM 14 N9 G A1217 16.521 100.313 111.412 1.00 44.16 N
ATOM 15 C8 G A1217 15.151 100.408 111.424 1.00 45.00 C
ATOM 16 N7 G A1217 14.559 99.263 111.622 1.00 44.65 N
ATOM 17 C5 G A1217 15.599 98.357 111.745 1.00 44.71 C
ATOM 18 C6 G A1217 15.571 96.964 111.978 1.00 46.19 C
ATOM 19 O6 G A1217 14.586 96.232 112.137 1.00 50.76 O
ATOM 20 N1 G A1217 16.854 96.427 112.027 1.00 44.74 N
ATOM 21 C2 G A1217 18.017 97.146 111.881 1.00 44.17 C
ATOM 22 N2 G A1217 19.160 96.455 111.970 1.00 41.81 N
ATOM 23 N3 G A1217 18.054 98.450 111.668 1.00 45.22 N
ATOM 24 C4 G A1217 16.818 98.987 111.611 1.00 45.09 C
ATOM 25 P A A1218 16.550 103.794 107.115 1.00 44.72 P
ATOM 26 OP1 A A1218 16.742 105.126 106.484 1.00 41.80 O
ATOM 27 OP2 A A1218 15.186 103.187 107.157 1.00 44.51 O
ATOM 28 O5' A A1218 17.511 102.762 106.376 1.00 42.99 O
TER

ATOM 1 O3' G B1217 17.162 103.885 108.597 1.00 41.37 O
ATOM 2 P A B1218 16.550 103.794 107.115 1.00 44.72 P
ATOM 3 OP1 A B1218 16.742 105.126 106.484 1.00 41.80 O
ATOM 4 OP2 A B1218 15.186 103.187 107.157 1.00 44.51 O
ATOM 5 O5' A B1218 17.511 102.762 106.376 1.00 42.99 O
ATOM 6 C5' A B1218 17.112 102.147 105.144 1.00 41.35 C
ATOM 7 C4' A B1218 18.283 102.045 104.200 1.00 39.99 C
ATOM 8 O4' A B1218 19.327 101.230 104.785 1.00 39.62 O
ATOM 9 C3' A B1218 17.947 101.358 102.894 1.00 40.35 C
ATOM 10 O3' A B1218 17.429 102.316 101.989 1.00 39.72 O
ATOM 11 C2' A B1218 19.296 100.821 102.458 1.00 40.37 C
ATOM 12 O2' A B1218 20.093 101.861 101.939 1.00 44.39 O
ATOM 13 C1' A B1218 19.886 100.386 103.799 1.00 38.77 C
ATOM 14 N9 A B1218 19.565 99.011 104.172 1.00 38.29 N
ATOM 15 C8 A B1218 18.509 98.593 104.941 1.00 39.37 C
ATOM 16 N7 A B1218 18.478 97.299 105.141 1.00 39.07 N
ATOM 17 C5 A B1218 19.580 96.829 104.451 1.00 36.46 C
ATOM 18 C6 A B1218 20.091 95.542 104.269 1.00 36.89 C
ATOM 19 N6 A B1218 19.543 94.448 104.801 1.00 35.86 N
ATOM 20 N1 A B1218 21.202 95.409 103.514 1.00 39.39 N
ATOM 21 C2 A B1218 21.755 96.512 102.987 1.00 39.27 C
ATOM 22 N3 A B1218 21.367 97.780 103.090 1.00 38.15 N
ATOM 23 C4 A B1218 20.259 97.872 103.843 1.00 38.26 C
ATOM 24 P G B1219 16.190 101.940 101.046 1.00 39.89 P
ATOM 25 OP1 G B1219 15.545 103.221 100.673 1.00 39.96 O
ATOM 26 OP2 G B1219 15.384 100.866 101.682 1.00 41.49 O
ATOM 27 O5' G B1219 16.881 101.319 99.757 1.00 39.43 O
TER

Atoms:
OP1: (12.665,105.211,110.780)
OP2: (11.962,102.738,110.931)
C3': (16.765,102.946,109.591)
C1': (17.472,101.406,111.242)
C5': (15.451,104.321,111.261)
O6: (14.586,96.232,112.137)
O4': (16.941,102.540,111.906)
C8: (15.151,100.408,111.424)
C2: (18.017,97.146,111.881)
C6: (15.571,96.964,111.978)
C5: (15.599,98.357,111.745)
C4: (16.818,98.987,111.611)
P: (12.849,103.856,111.353)
C4': (16.746,103.618,110.954)
C2': (17.760,101.809,109.790)
O2': (19.099,102.247,109.686)
N1: (16.854,96.427,112.027)
N2: (19.160,96.455,111.970)
N3: (18.054,98.450,111.668)
N7: (14.559,99.263,111.622)
N9: (16.521,100.313,111.412)
O5': (14.351,103.404,111.088)
O3': (17.162,103.885,108.597)
OP1: (16.742,105.126,106.484)
OP2: (15.186,103.187,107.157)
C3': (17.947,101.358,102.894)
C1': (19.886,100.386,103.799)
C5': (17.112,102.147,105.144)
O4': (19.327,101.230,104.785)
C8: (18.509,98.593,104.941)
O2': (20.093,101.861,101.939)
C6: (20.091,95.542,104.269)
C5: (19.580,96.829,104.451)
C4: (20.259,97.872,103.843)
P: (16.550,103.794,107.115)
C4': (18.283,102.045,104.200)
C2': (19.296,100.821,102.458)
C2: (21.755,96.512,102.987)
N1: (21.202,95.409,103.514)
N3: (21.367,97.780,103.090)
N6: (19.543,94.448,104.801)
N7: (18.478,97.299,105.141)
N9: (19.565,99.011,104.172)
O5': (17.511,102.762,106.376)
O3': (17.429,102.316,101.989)
Image (generated by PyMOL):
PyMOL image
show in jmol