Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0450:0451
Extra
PDB:
ATOM 1 O3' C A 449 43.713 147.778 52.120 1.00 44.72 O
ATOM 2 P A A 450 44.107 148.916 51.067 1.00 47.08 P
ATOM 3 OP1 A A 450 43.361 150.122 51.480 1.00 46.73 O
ATOM 4 OP2 A A 450 43.959 148.385 49.682 1.00 44.83 O
ATOM 5 O5' A A 450 45.658 149.148 51.326 1.00 50.51 O
ATOM 6 C5' A A 450 46.480 149.823 50.358 1.00 53.33 C
ATOM 7 C4' A A 450 47.929 149.707 50.753 1.00 55.65 C
ATOM 8 O4' A A 450 48.176 150.471 51.960 1.00 57.73 O
ATOM 9 C3' A A 450 48.365 148.290 51.075 1.00 55.71 C
ATOM 10 O3' A A 450 48.760 147.652 49.862 1.00 57.67 O
ATOM 11 C2' A A 450 49.526 148.511 52.036 1.00 57.42 C
ATOM 12 O2' A A 450 50.717 148.833 51.347 1.00 56.88 O
ATOM 13 C1' A A 450 49.058 149.753 52.804 1.00 58.56 C
ATOM 14 N9 A A 450 48.364 149.522 54.074 1.00 59.63 N
ATOM 15 C8 A A 450 47.005 149.509 54.290 1.00 60.87 C
ATOM 16 N7 A A 450 46.669 149.374 55.551 1.00 61.60 N
ATOM 17 C5 A A 450 47.886 149.274 56.209 1.00 61.57 C
ATOM 18 C6 A A 450 48.217 149.154 57.573 1.00 61.54 C
ATOM 19 N6 A A 450 47.313 149.151 58.557 1.00 61.47 N
ATOM 20 N1 A A 450 49.525 149.061 57.896 1.00 60.84 N
ATOM 21 C2 A A 450 50.432 149.112 56.909 1.00 61.55 C
ATOM 22 N3 A A 450 50.247 149.251 55.594 1.00 60.60 N
ATOM 23 C4 A A 450 48.938 149.329 55.307 1.00 60.57 C
ATOM 24 P A A 451 48.541 146.070 49.669 1.00 59.44 P
ATOM 25 OP1 A A 451 48.949 145.764 48.265 1.00 56.86 O
ATOM 26 OP2 A A 451 47.174 145.687 50.132 1.00 58.83 O
ATOM 27 O5' A A 451 49.617 145.430 50.658 1.00 54.01 O
TER
ATOM 1 O3' A B 450 48.760 147.652 49.862 1.00 57.67 O
ATOM 2 P A B 451 48.541 146.070 49.669 1.00 59.44 P
ATOM 3 OP1 A B 451 48.949 145.764 48.265 1.00 56.86 O
ATOM 4 OP2 A B 451 47.174 145.687 50.132 1.00 58.83 O
ATOM 5 O5' A B 451 49.617 145.430 50.658 1.00 54.01 O
ATOM 6 C5' A B 451 51.024 145.641 50.443 1.00 44.04 C
ATOM 7 C4' A B 451 51.769 144.339 50.571 1.00 38.82 C
ATOM 8 O4' A B 451 51.749 143.910 51.959 1.00 38.95 O
ATOM 9 C3' A B 451 51.208 143.170 49.768 1.00 36.32 C
ATOM 10 O3' A B 451 52.284 142.300 49.472 1.00 37.26 O
ATOM 11 C2' A B 451 50.344 142.469 50.807 1.00 36.06 C
ATOM 12 O2' A B 451 50.067 141.117 50.512 1.00 35.78 O
ATOM 13 C1' A B 451 51.255 142.592 52.026 1.00 36.32 C
ATOM 14 N9 A B 451 50.624 142.368 53.325 1.00 32.92 N
ATOM 15 C8 A B 451 49.718 143.148 53.998 1.00 32.53 C
ATOM 16 N7 A B 451 49.305 142.624 55.124 1.00 31.29 N
ATOM 17 C5 A B 451 49.997 141.424 55.205 1.00 29.86 C
ATOM 18 C6 A B 451 49.995 140.396 56.156 1.00 28.90 C
ATOM 19 N6 A B 451 49.235 140.401 57.253 1.00 28.92 N
ATOM 20 N1 A B 451 50.809 139.342 55.940 1.00 29.55 N
ATOM 21 C2 A B 451 51.566 139.331 54.836 1.00 28.41 C
ATOM 22 N3 A B 451 51.647 140.233 53.866 1.00 28.98 N
ATOM 23 C4 A B 451 50.826 141.265 54.113 1.00 29.76 C
ATOM 24 P G B 452 52.760 142.088 47.960 1.00 41.18 P
ATOM 25 OP1 G B 452 53.079 143.435 47.428 1.00 41.02 O
ATOM 26 OP2 G B 452 51.779 141.233 47.247 1.00 40.87 O
ATOM 27 O5' G B 452 54.099 141.237 48.128 1.00 37.41 O
TER
ATOM 2 P A A 450 44.107 148.916 51.067 1.00 47.08 P
ATOM 3 OP1 A A 450 43.361 150.122 51.480 1.00 46.73 O
ATOM 4 OP2 A A 450 43.959 148.385 49.682 1.00 44.83 O
ATOM 5 O5' A A 450 45.658 149.148 51.326 1.00 50.51 O
ATOM 6 C5' A A 450 46.480 149.823 50.358 1.00 53.33 C
ATOM 7 C4' A A 450 47.929 149.707 50.753 1.00 55.65 C
ATOM 8 O4' A A 450 48.176 150.471 51.960 1.00 57.73 O
ATOM 9 C3' A A 450 48.365 148.290 51.075 1.00 55.71 C
ATOM 10 O3' A A 450 48.760 147.652 49.862 1.00 57.67 O
ATOM 11 C2' A A 450 49.526 148.511 52.036 1.00 57.42 C
ATOM 12 O2' A A 450 50.717 148.833 51.347 1.00 56.88 O
ATOM 13 C1' A A 450 49.058 149.753 52.804 1.00 58.56 C
ATOM 14 N9 A A 450 48.364 149.522 54.074 1.00 59.63 N
ATOM 15 C8 A A 450 47.005 149.509 54.290 1.00 60.87 C
ATOM 16 N7 A A 450 46.669 149.374 55.551 1.00 61.60 N
ATOM 17 C5 A A 450 47.886 149.274 56.209 1.00 61.57 C
ATOM 18 C6 A A 450 48.217 149.154 57.573 1.00 61.54 C
ATOM 19 N6 A A 450 47.313 149.151 58.557 1.00 61.47 N
ATOM 20 N1 A A 450 49.525 149.061 57.896 1.00 60.84 N
ATOM 21 C2 A A 450 50.432 149.112 56.909 1.00 61.55 C
ATOM 22 N3 A A 450 50.247 149.251 55.594 1.00 60.60 N
ATOM 23 C4 A A 450 48.938 149.329 55.307 1.00 60.57 C
ATOM 24 P A A 451 48.541 146.070 49.669 1.00 59.44 P
ATOM 25 OP1 A A 451 48.949 145.764 48.265 1.00 56.86 O
ATOM 26 OP2 A A 451 47.174 145.687 50.132 1.00 58.83 O
ATOM 27 O5' A A 451 49.617 145.430 50.658 1.00 54.01 O
TER
ATOM 1 O3' A B 450 48.760 147.652 49.862 1.00 57.67 O
ATOM 2 P A B 451 48.541 146.070 49.669 1.00 59.44 P
ATOM 3 OP1 A B 451 48.949 145.764 48.265 1.00 56.86 O
ATOM 4 OP2 A B 451 47.174 145.687 50.132 1.00 58.83 O
ATOM 5 O5' A B 451 49.617 145.430 50.658 1.00 54.01 O
ATOM 6 C5' A B 451 51.024 145.641 50.443 1.00 44.04 C
ATOM 7 C4' A B 451 51.769 144.339 50.571 1.00 38.82 C
ATOM 8 O4' A B 451 51.749 143.910 51.959 1.00 38.95 O
ATOM 9 C3' A B 451 51.208 143.170 49.768 1.00 36.32 C
ATOM 10 O3' A B 451 52.284 142.300 49.472 1.00 37.26 O
ATOM 11 C2' A B 451 50.344 142.469 50.807 1.00 36.06 C
ATOM 12 O2' A B 451 50.067 141.117 50.512 1.00 35.78 O
ATOM 13 C1' A B 451 51.255 142.592 52.026 1.00 36.32 C
ATOM 14 N9 A B 451 50.624 142.368 53.325 1.00 32.92 N
ATOM 15 C8 A B 451 49.718 143.148 53.998 1.00 32.53 C
ATOM 16 N7 A B 451 49.305 142.624 55.124 1.00 31.29 N
ATOM 17 C5 A B 451 49.997 141.424 55.205 1.00 29.86 C
ATOM 18 C6 A B 451 49.995 140.396 56.156 1.00 28.90 C
ATOM 19 N6 A B 451 49.235 140.401 57.253 1.00 28.92 N
ATOM 20 N1 A B 451 50.809 139.342 55.940 1.00 29.55 N
ATOM 21 C2 A B 451 51.566 139.331 54.836 1.00 28.41 C
ATOM 22 N3 A B 451 51.647 140.233 53.866 1.00 28.98 N
ATOM 23 C4 A B 451 50.826 141.265 54.113 1.00 29.76 C
ATOM 24 P G B 452 52.760 142.088 47.960 1.00 41.18 P
ATOM 25 OP1 G B 452 53.079 143.435 47.428 1.00 41.02 O
ATOM 26 OP2 G B 452 51.779 141.233 47.247 1.00 40.87 O
ATOM 27 O5' G B 452 54.099 141.237 48.128 1.00 37.41 O
TER
Atoms:
OP1: (43.361,150.122,51.480)
OP2: (43.959,148.385,49.682)
C3': (48.365,148.290,51.075)
C1': (49.058,149.753,52.804)
C5': (46.480,149.823,50.358)
O4': (48.176,150.471,51.960)
C8: (47.005,149.509,54.290)
O2': (50.717,148.833,51.347)
C6: (48.217,149.154,57.573)
C5: (47.886,149.274,56.209)
C4: (48.938,149.329,55.307)
P: (44.107,148.916,51.067)
C4': (47.929,149.707,50.753)
C2': (49.526,148.511,52.036)
C2: (50.432,149.112,56.909)
N1: (49.525,149.061,57.896)
N3: (50.247,149.251,55.594)
N6: (47.313,149.151,58.557)
N7: (46.669,149.374,55.551)
N9: (48.364,149.522,54.074)
O5': (45.658,149.148,51.326)
O3': (48.760,147.652,49.862)
OP2: (43.959,148.385,49.682)
C3': (48.365,148.290,51.075)
C1': (49.058,149.753,52.804)
C5': (46.480,149.823,50.358)
O4': (48.176,150.471,51.960)
C8: (47.005,149.509,54.290)
O2': (50.717,148.833,51.347)
C6: (48.217,149.154,57.573)
C5: (47.886,149.274,56.209)
C4: (48.938,149.329,55.307)
P: (44.107,148.916,51.067)
C4': (47.929,149.707,50.753)
C2': (49.526,148.511,52.036)
C2: (50.432,149.112,56.909)
N1: (49.525,149.061,57.896)
N3: (50.247,149.251,55.594)
N6: (47.313,149.151,58.557)
N7: (46.669,149.374,55.551)
N9: (48.364,149.522,54.074)
O5': (45.658,149.148,51.326)
O3': (48.760,147.652,49.862)
OP1: (48.949,145.764,48.265)
OP2: (47.174,145.687,50.132)
C3': (51.208,143.170,49.768)
C1': (51.255,142.592,52.026)
C5': (51.024,145.641,50.443)
O4': (51.749,143.910,51.959)
C8: (49.718,143.148,53.998)
O2': (50.067,141.117,50.512)
C6: (49.995,140.396,56.156)
C5: (49.997,141.424,55.205)
C4: (50.826,141.265,54.113)
P: (48.541,146.070,49.669)
C4': (51.769,144.339,50.571)
C2': (50.344,142.469,50.807)
C2: (51.566,139.331,54.836)
N1: (50.809,139.342,55.940)
N3: (51.647,140.233,53.866)
N6: (49.235,140.401,57.253)
N7: (49.305,142.624,55.124)
N9: (50.624,142.368,53.325)
O5': (49.617,145.430,50.658)
O3': (52.284,142.300,49.472)
OP2: (47.174,145.687,50.132)
C3': (51.208,143.170,49.768)
C1': (51.255,142.592,52.026)
C5': (51.024,145.641,50.443)
O4': (51.749,143.910,51.959)
C8: (49.718,143.148,53.998)
O2': (50.067,141.117,50.512)
C6: (49.995,140.396,56.156)
C5: (49.997,141.424,55.205)
C4: (50.826,141.265,54.113)
P: (48.541,146.070,49.669)
C4': (51.769,144.339,50.571)
C2': (50.344,142.469,50.807)
C2: (51.566,139.331,54.836)
N1: (50.809,139.342,55.940)
N3: (51.647,140.233,53.866)
N6: (49.235,140.401,57.253)
N7: (49.305,142.624,55.124)
N9: (50.624,142.368,53.325)
O5': (49.617,145.430,50.658)
O3': (52.284,142.300,49.472)
Image (generated by PyMOL):