ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01217:01218

Extra

PDB:
ATOM 1 O3' C A1216 12.899 104.112 112.869 1.00 39.94 O
ATOM 2 P G A1217 12.950 103.904 111.280 1.00 38.27 P
ATOM 3 OP1 G A1217 12.761 105.243 110.678 1.00 36.60 O
ATOM 4 OP2 G A1217 12.055 102.779 110.895 1.00 35.12 O
ATOM 5 O5' G A1217 14.447 103.461 110.996 1.00 40.30 O
ATOM 6 C5' G A1217 15.538 104.387 111.148 1.00 39.82 C
ATOM 7 C4' G A1217 16.837 103.680 110.878 1.00 38.71 C
ATOM 8 O4' G A1217 16.994 102.616 111.846 1.00 39.28 O
ATOM 9 C3' G A1217 16.868 102.987 109.528 1.00 39.52 C
ATOM 10 O3' G A1217 17.291 103.901 108.526 1.00 39.09 O
ATOM 11 C2' G A1217 17.837 101.837 109.759 1.00 40.07 C
ATOM 12 O2' G A1217 19.188 102.239 109.687 1.00 41.81 O
ATOM 13 C1' G A1217 17.512 101.463 111.208 1.00 40.93 C
ATOM 14 N9 G A1217 16.533 100.393 111.362 1.00 41.34 N
ATOM 15 C8 G A1217 15.164 100.515 111.370 1.00 41.61 C
ATOM 16 N7 G A1217 14.552 99.381 111.565 1.00 42.09 N
ATOM 17 C5 G A1217 15.577 98.455 111.688 1.00 41.44 C
ATOM 18 C6 G A1217 15.528 97.061 111.923 1.00 42.99 C
ATOM 19 O6 G A1217 14.535 96.341 112.088 1.00 45.39 O
ATOM 20 N1 G A1217 16.805 96.506 111.970 1.00 42.22 N
ATOM 21 C2 G A1217 17.977 97.209 111.821 1.00 40.66 C
ATOM 22 N2 G A1217 19.117 96.503 111.908 1.00 37.25 N
ATOM 23 N3 G A1217 18.031 98.510 111.606 1.00 40.77 N
ATOM 24 C4 G A1217 16.804 99.064 111.553 1.00 40.65 C
ATOM 25 P A A1218 16.648 103.830 107.060 1.00 40.83 P
ATOM 26 OP1 A A1218 16.797 105.167 106.436 1.00 37.34 O
ATOM 27 OP2 A A1218 15.303 103.198 107.133 1.00 41.33 O
ATOM 28 O5' A A1218 17.601 102.811 106.305 1.00 39.53 O
TER

ATOM 1 O3' G B1217 17.291 103.901 108.526 1.00 39.09 O
ATOM 2 P A B1218 16.648 103.830 107.060 1.00 40.83 P
ATOM 3 OP1 A B1218 16.797 105.167 106.436 1.00 37.34 O
ATOM 4 OP2 A B1218 15.303 103.198 107.133 1.00 41.33 O
ATOM 5 O5' A B1218 17.601 102.811 106.305 1.00 39.53 O
ATOM 6 C5' A B1218 17.185 102.199 105.089 1.00 36.98 C
ATOM 7 C4' A B1218 18.351 102.080 104.149 1.00 36.78 C
ATOM 8 O4' A B1218 19.377 101.245 104.735 1.00 35.98 O
ATOM 9 C3' A B1218 18.008 101.404 102.841 1.00 37.38 C
ATOM 10 O3' A B1218 17.488 102.369 101.947 1.00 36.42 O
ATOM 11 C2' A B1218 19.351 100.856 102.402 1.00 37.92 C
ATOM 12 O2' A B1218 20.164 101.886 101.883 1.00 42.26 O
ATOM 13 C1' A B1218 19.930 100.404 103.742 1.00 36.34 C
ATOM 14 N9 A B1218 19.595 99.029 104.101 1.00 35.91 N
ATOM 15 C8 A B1218 18.544 98.607 104.877 1.00 37.26 C
ATOM 16 N7 A B1218 18.516 97.313 105.072 1.00 37.58 N
ATOM 17 C5 A B1218 19.614 96.849 104.369 1.00 36.64 C
ATOM 18 C6 A B1218 20.137 95.564 104.187 1.00 36.18 C
ATOM 19 N6 A B1218 19.610 94.468 104.734 1.00 35.62 N
ATOM 20 N1 A B1218 21.238 95.439 103.419 1.00 37.73 N
ATOM 21 C2 A B1218 21.774 96.543 102.881 1.00 38.14 C
ATOM 22 N3 A B1218 21.379 97.809 102.987 1.00 37.47 N
ATOM 23 C4 A B1218 20.281 97.894 103.753 1.00 36.84 C
ATOM 24 P G B1219 16.253 101.994 101.006 1.00 34.48 P
ATOM 25 OP1 G B1219 15.584 103.261 100.626 1.00 36.48 O
ATOM 26 OP2 G B1219 15.474 100.922 101.675 1.00 36.01 O
ATOM 27 O5' G B1219 16.954 101.390 99.717 1.00 33.40 O
TER

Atoms:
OP1: (12.761,105.243,110.678)
OP2: (12.055,102.779,110.895)
C3': (16.868,102.987,109.528)
C1': (17.512,101.463,111.208)
C5': (15.538,104.387,111.148)
O6: (14.535,96.341,112.088)
O4': (16.994,102.616,111.846)
C8: (15.164,100.515,111.370)
C2: (17.977,97.209,111.821)
C6: (15.528,97.061,111.923)
C5: (15.577,98.455,111.688)
C4: (16.804,99.064,111.553)
P: (12.950,103.904,111.280)
C4': (16.837,103.680,110.878)
C2': (17.837,101.837,109.759)
O2': (19.188,102.239,109.687)
N1: (16.805,96.506,111.970)
N2: (19.117,96.503,111.908)
N3: (18.031,98.510,111.606)
N7: (14.552,99.381,111.565)
N9: (16.533,100.393,111.362)
O5': (14.447,103.461,110.996)
O3': (17.291,103.901,108.526)
OP1: (16.797,105.167,106.436)
OP2: (15.303,103.198,107.133)
C3': (18.008,101.404,102.841)
C1': (19.930,100.404,103.742)
C5': (17.185,102.199,105.089)
O4': (19.377,101.245,104.735)
C8: (18.544,98.607,104.877)
O2': (20.164,101.886,101.883)
C6: (20.137,95.564,104.187)
C5: (19.614,96.849,104.369)
C4: (20.281,97.894,103.753)
P: (16.648,103.830,107.060)
C4': (18.351,102.080,104.149)
C2': (19.351,100.856,102.402)
C2: (21.774,96.543,102.881)
N1: (21.238,95.439,103.419)
N3: (21.379,97.809,102.987)
N6: (19.610,94.468,104.734)
N7: (18.516,97.313,105.072)
N9: (19.595,99.029,104.101)
O5': (17.601,102.811,106.305)
O3': (17.488,102.369,101.947)
Image (generated by PyMOL):
PyMOL image
show in jmol