Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0450:0451
Extra
PDB:
ATOM 1 O3' C A 449 43.817 147.771 52.087 1.00 45.90 O
ATOM 2 P A A 450 44.259 148.853 50.998 1.00 50.87 P
ATOM 3 OP1 A A 450 43.491 150.085 51.312 1.00 52.07 O
ATOM 4 OP2 A A 450 44.155 148.233 49.646 1.00 48.80 O
ATOM 5 O5' A A 450 45.798 149.106 51.306 1.00 52.57 O
ATOM 6 C5' A A 450 46.624 149.854 50.398 1.00 57.78 C
ATOM 7 C4' A A 450 48.070 149.745 50.813 1.00 61.24 C
ATOM 8 O4' A A 450 48.291 150.497 52.032 1.00 62.98 O
ATOM 9 C3' A A 450 48.512 148.328 51.128 1.00 62.63 C
ATOM 10 O3' A A 450 48.920 147.670 49.929 1.00 63.72 O
ATOM 11 C2' A A 450 49.653 148.549 52.112 1.00 64.63 C
ATOM 12 O2' A A 450 50.861 148.883 51.454 1.00 65.86 O
ATOM 13 C1' A A 450 49.153 149.772 52.890 1.00 65.20 C
ATOM 14 N9 A A 450 48.413 149.496 54.125 1.00 67.09 N
ATOM 15 C8 A A 450 47.047 149.439 54.277 1.00 68.22 C
ATOM 16 N7 A A 450 46.656 149.266 55.515 1.00 68.30 N
ATOM 17 C5 A A 450 47.842 149.189 56.228 1.00 68.85 C
ATOM 18 C6 A A 450 48.107 149.046 57.600 1.00 69.35 C
ATOM 19 N6 A A 450 47.155 149.006 58.535 1.00 68.82 N
ATOM 20 N1 A A 450 49.401 148.972 57.985 1.00 69.39 N
ATOM 21 C2 A A 450 50.354 149.072 57.048 1.00 69.70 C
ATOM 22 N3 A A 450 50.230 149.243 55.730 1.00 69.00 N
ATOM 23 C4 A A 450 48.934 149.294 55.380 1.00 68.26 C
ATOM 24 P A A 451 48.637 146.096 49.734 1.00 65.40 P
ATOM 25 OP1 A A 451 48.963 145.777 48.316 1.00 64.16 O
ATOM 26 OP2 A A 451 47.292 145.759 50.269 1.00 65.70 O
ATOM 27 O5' A A 451 49.719 145.398 50.673 1.00 60.88 O
TER
ATOM 1 O3' A B 450 48.920 147.670 49.929 1.00 63.72 O
ATOM 2 P A B 451 48.637 146.096 49.734 1.00 65.40 P
ATOM 3 OP1 A B 451 48.963 145.777 48.316 1.00 64.16 O
ATOM 4 OP2 A B 451 47.292 145.759 50.269 1.00 65.70 O
ATOM 5 O5' A B 451 49.719 145.398 50.673 1.00 60.88 O
ATOM 6 C5' A B 451 51.123 145.613 50.461 1.00 52.96 C
ATOM 7 C4' A B 451 51.870 144.315 50.607 1.00 49.06 C
ATOM 8 O4' A B 451 51.834 143.877 51.993 1.00 48.67 O
ATOM 9 C3' A B 451 51.330 143.145 49.795 1.00 46.42 C
ATOM 10 O3' A B 451 52.423 142.303 49.516 1.00 46.00 O
ATOM 11 C2' A B 451 50.480 142.407 50.815 1.00 45.87 C
ATOM 12 O2' A B 451 50.294 141.050 50.477 1.00 45.21 O
ATOM 13 C1' A B 451 51.371 142.546 52.047 1.00 45.80 C
ATOM 14 N9 A B 451 50.726 142.313 53.338 1.00 42.89 N
ATOM 15 C8 A B 451 49.841 143.117 54.007 1.00 43.21 C
ATOM 16 N7 A B 451 49.420 142.611 55.140 1.00 42.06 N
ATOM 17 C5 A B 451 50.074 141.393 55.220 1.00 39.68 C
ATOM 18 C6 A B 451 50.044 140.380 56.173 1.00 38.96 C
ATOM 19 N6 A B 451 49.281 140.420 57.264 1.00 39.56 N
ATOM 20 N1 A B 451 50.828 139.304 55.967 1.00 38.07 N
ATOM 21 C2 A B 451 51.578 139.261 54.862 1.00 36.80 C
ATOM 22 N3 A B 451 51.681 140.148 53.885 1.00 37.45 N
ATOM 23 C4 A B 451 50.893 141.204 54.126 1.00 39.52 C
ATOM 24 P G B 452 52.878 142.064 48.012 1.00 46.93 P
ATOM 25 OP1 G B 452 53.276 143.391 47.493 1.00 46.73 O
ATOM 26 OP2 G B 452 51.810 141.297 47.325 1.00 46.45 O
ATOM 27 O5' G B 452 54.166 141.138 48.184 1.00 43.23 O
TER
ATOM 2 P A A 450 44.259 148.853 50.998 1.00 50.87 P
ATOM 3 OP1 A A 450 43.491 150.085 51.312 1.00 52.07 O
ATOM 4 OP2 A A 450 44.155 148.233 49.646 1.00 48.80 O
ATOM 5 O5' A A 450 45.798 149.106 51.306 1.00 52.57 O
ATOM 6 C5' A A 450 46.624 149.854 50.398 1.00 57.78 C
ATOM 7 C4' A A 450 48.070 149.745 50.813 1.00 61.24 C
ATOM 8 O4' A A 450 48.291 150.497 52.032 1.00 62.98 O
ATOM 9 C3' A A 450 48.512 148.328 51.128 1.00 62.63 C
ATOM 10 O3' A A 450 48.920 147.670 49.929 1.00 63.72 O
ATOM 11 C2' A A 450 49.653 148.549 52.112 1.00 64.63 C
ATOM 12 O2' A A 450 50.861 148.883 51.454 1.00 65.86 O
ATOM 13 C1' A A 450 49.153 149.772 52.890 1.00 65.20 C
ATOM 14 N9 A A 450 48.413 149.496 54.125 1.00 67.09 N
ATOM 15 C8 A A 450 47.047 149.439 54.277 1.00 68.22 C
ATOM 16 N7 A A 450 46.656 149.266 55.515 1.00 68.30 N
ATOM 17 C5 A A 450 47.842 149.189 56.228 1.00 68.85 C
ATOM 18 C6 A A 450 48.107 149.046 57.600 1.00 69.35 C
ATOM 19 N6 A A 450 47.155 149.006 58.535 1.00 68.82 N
ATOM 20 N1 A A 450 49.401 148.972 57.985 1.00 69.39 N
ATOM 21 C2 A A 450 50.354 149.072 57.048 1.00 69.70 C
ATOM 22 N3 A A 450 50.230 149.243 55.730 1.00 69.00 N
ATOM 23 C4 A A 450 48.934 149.294 55.380 1.00 68.26 C
ATOM 24 P A A 451 48.637 146.096 49.734 1.00 65.40 P
ATOM 25 OP1 A A 451 48.963 145.777 48.316 1.00 64.16 O
ATOM 26 OP2 A A 451 47.292 145.759 50.269 1.00 65.70 O
ATOM 27 O5' A A 451 49.719 145.398 50.673 1.00 60.88 O
TER
ATOM 1 O3' A B 450 48.920 147.670 49.929 1.00 63.72 O
ATOM 2 P A B 451 48.637 146.096 49.734 1.00 65.40 P
ATOM 3 OP1 A B 451 48.963 145.777 48.316 1.00 64.16 O
ATOM 4 OP2 A B 451 47.292 145.759 50.269 1.00 65.70 O
ATOM 5 O5' A B 451 49.719 145.398 50.673 1.00 60.88 O
ATOM 6 C5' A B 451 51.123 145.613 50.461 1.00 52.96 C
ATOM 7 C4' A B 451 51.870 144.315 50.607 1.00 49.06 C
ATOM 8 O4' A B 451 51.834 143.877 51.993 1.00 48.67 O
ATOM 9 C3' A B 451 51.330 143.145 49.795 1.00 46.42 C
ATOM 10 O3' A B 451 52.423 142.303 49.516 1.00 46.00 O
ATOM 11 C2' A B 451 50.480 142.407 50.815 1.00 45.87 C
ATOM 12 O2' A B 451 50.294 141.050 50.477 1.00 45.21 O
ATOM 13 C1' A B 451 51.371 142.546 52.047 1.00 45.80 C
ATOM 14 N9 A B 451 50.726 142.313 53.338 1.00 42.89 N
ATOM 15 C8 A B 451 49.841 143.117 54.007 1.00 43.21 C
ATOM 16 N7 A B 451 49.420 142.611 55.140 1.00 42.06 N
ATOM 17 C5 A B 451 50.074 141.393 55.220 1.00 39.68 C
ATOM 18 C6 A B 451 50.044 140.380 56.173 1.00 38.96 C
ATOM 19 N6 A B 451 49.281 140.420 57.264 1.00 39.56 N
ATOM 20 N1 A B 451 50.828 139.304 55.967 1.00 38.07 N
ATOM 21 C2 A B 451 51.578 139.261 54.862 1.00 36.80 C
ATOM 22 N3 A B 451 51.681 140.148 53.885 1.00 37.45 N
ATOM 23 C4 A B 451 50.893 141.204 54.126 1.00 39.52 C
ATOM 24 P G B 452 52.878 142.064 48.012 1.00 46.93 P
ATOM 25 OP1 G B 452 53.276 143.391 47.493 1.00 46.73 O
ATOM 26 OP2 G B 452 51.810 141.297 47.325 1.00 46.45 O
ATOM 27 O5' G B 452 54.166 141.138 48.184 1.00 43.23 O
TER
Atoms:
OP1: (43.491,150.085,51.312)
OP2: (44.155,148.233,49.646)
C3': (48.512,148.328,51.128)
C1': (49.153,149.772,52.890)
C5': (46.624,149.854,50.398)
O4': (48.291,150.497,52.032)
C8: (47.047,149.439,54.277)
O2': (50.861,148.883,51.454)
C6: (48.107,149.046,57.600)
C5: (47.842,149.189,56.228)
C4: (48.934,149.294,55.380)
P: (44.259,148.853,50.998)
C4': (48.070,149.745,50.813)
C2': (49.653,148.549,52.112)
C2: (50.354,149.072,57.048)
N1: (49.401,148.972,57.985)
N3: (50.230,149.243,55.730)
N6: (47.155,149.006,58.535)
N7: (46.656,149.266,55.515)
N9: (48.413,149.496,54.125)
O5': (45.798,149.106,51.306)
O3': (48.920,147.670,49.929)
OP2: (44.155,148.233,49.646)
C3': (48.512,148.328,51.128)
C1': (49.153,149.772,52.890)
C5': (46.624,149.854,50.398)
O4': (48.291,150.497,52.032)
C8: (47.047,149.439,54.277)
O2': (50.861,148.883,51.454)
C6: (48.107,149.046,57.600)
C5: (47.842,149.189,56.228)
C4: (48.934,149.294,55.380)
P: (44.259,148.853,50.998)
C4': (48.070,149.745,50.813)
C2': (49.653,148.549,52.112)
C2: (50.354,149.072,57.048)
N1: (49.401,148.972,57.985)
N3: (50.230,149.243,55.730)
N6: (47.155,149.006,58.535)
N7: (46.656,149.266,55.515)
N9: (48.413,149.496,54.125)
O5': (45.798,149.106,51.306)
O3': (48.920,147.670,49.929)
OP1: (48.963,145.777,48.316)
OP2: (47.292,145.759,50.269)
C3': (51.330,143.145,49.795)
C1': (51.371,142.546,52.047)
C5': (51.123,145.613,50.461)
O4': (51.834,143.877,51.993)
C8: (49.841,143.117,54.007)
O2': (50.294,141.050,50.477)
C6: (50.044,140.380,56.173)
C5: (50.074,141.393,55.220)
C4: (50.893,141.204,54.126)
P: (48.637,146.096,49.734)
C4': (51.870,144.315,50.607)
C2': (50.480,142.407,50.815)
C2: (51.578,139.261,54.862)
N1: (50.828,139.304,55.967)
N3: (51.681,140.148,53.885)
N6: (49.281,140.420,57.264)
N7: (49.420,142.611,55.140)
N9: (50.726,142.313,53.338)
O5': (49.719,145.398,50.673)
O3': (52.423,142.303,49.516)
OP2: (47.292,145.759,50.269)
C3': (51.330,143.145,49.795)
C1': (51.371,142.546,52.047)
C5': (51.123,145.613,50.461)
O4': (51.834,143.877,51.993)
C8: (49.841,143.117,54.007)
O2': (50.294,141.050,50.477)
C6: (50.044,140.380,56.173)
C5: (50.074,141.393,55.220)
C4: (50.893,141.204,54.126)
P: (48.637,146.096,49.734)
C4': (51.870,144.315,50.607)
C2': (50.480,142.407,50.815)
C2: (51.578,139.261,54.862)
N1: (50.828,139.304,55.967)
N3: (51.681,140.148,53.885)
N6: (49.281,140.420,57.264)
N7: (49.420,142.611,55.140)
N9: (50.726,142.313,53.338)
O5': (49.719,145.398,50.673)
O3': (52.423,142.303,49.516)
Image (generated by PyMOL):