Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0519:0520
Extra
PDB:
ATOM 1 O3' C A 518 16.955 136.245 103.512 1.00 43.79 O
ATOM 2 P G A 519 16.717 137.317 104.680 1.00 43.05 P
ATOM 3 OP1 G A 519 16.494 136.551 105.930 1.00 43.93 O
ATOM 4 OP2 G A 519 15.709 138.311 104.231 1.00 40.27 O
ATOM 5 O5' G A 519 18.111 138.069 104.821 1.00 44.56 O
ATOM 6 C5' G A 519 19.310 137.364 105.192 1.00 43.54 C
ATOM 7 C4' G A 519 20.511 138.243 104.955 1.00 43.91 C
ATOM 8 O4' G A 519 20.486 138.693 103.572 1.00 45.78 O
ATOM 9 C3' G A 519 20.526 139.533 105.753 1.00 43.84 C
ATOM 10 O3' G A 519 21.038 139.337 107.067 1.00 42.87 O
ATOM 11 C2' G A 519 21.402 140.433 104.892 1.00 46.14 C
ATOM 12 O2' G A 519 22.783 140.159 105.009 1.00 47.10 O
ATOM 13 C1' G A 519 20.943 140.032 103.492 1.00 46.65 C
ATOM 14 N9 G A 519 19.850 140.867 103.002 1.00 48.89 N
ATOM 15 C8 G A 519 18.506 140.578 103.006 1.00 49.29 C
ATOM 16 N7 G A 519 17.776 141.534 102.501 1.00 49.22 N
ATOM 17 C5 G A 519 18.692 142.512 102.144 1.00 50.83 C
ATOM 18 C6 G A 519 18.493 143.775 101.551 1.00 51.95 C
ATOM 19 O6 G A 519 17.435 144.301 101.211 1.00 55.97 O
ATOM 20 N1 G A 519 19.694 144.448 101.361 1.00 52.67 N
ATOM 21 C2 G A 519 20.932 143.965 101.700 1.00 53.43 C
ATOM 22 N2 G A 519 21.977 144.766 101.433 1.00 54.77 N
ATOM 23 N3 G A 519 21.133 142.784 102.257 1.00 52.86 N
ATOM 24 C4 G A 519 19.976 142.115 102.447 1.00 51.20 C
ATOM 25 P A A 520 20.777 140.451 108.202 1.00 41.74 P
ATOM 26 OP1 A A 520 20.443 139.741 109.464 1.00 39.76 O
ATOM 27 OP2 A A 520 19.819 141.432 107.642 1.00 42.19 O
ATOM 28 O5' A A 520 22.197 141.156 108.377 1.00 39.39 O
TER
ATOM 1 O3' G B 519 21.038 139.337 107.067 1.00 42.87 O
ATOM 2 P A B 520 20.777 140.451 108.202 1.00 41.74 P
ATOM 3 OP1 A B 520 20.443 139.741 109.464 1.00 39.76 O
ATOM 4 OP2 A B 520 19.819 141.432 107.642 1.00 42.19 O
ATOM 5 O5' A B 520 22.197 141.156 108.377 1.00 39.39 O
ATOM 6 C5' A B 520 23.403 140.364 108.393 1.00 37.21 C
ATOM 7 C4' A B 520 24.573 141.177 108.888 1.00 35.30 C
ATOM 8 O4' A B 520 24.840 142.257 107.971 1.00 35.51 O
ATOM 9 C3' A B 520 24.396 141.841 110.238 1.00 34.94 C
ATOM 10 O3' A B 520 24.779 140.926 111.249 1.00 35.60 O
ATOM 11 C2' A B 520 25.385 142.996 110.169 1.00 35.39 C
ATOM 12 O2' A B 520 26.698 142.573 110.443 1.00 35.53 O
ATOM 13 C1' A B 520 25.316 143.375 108.690 1.00 36.04 C
ATOM 14 N9 A B 520 24.466 144.511 108.356 1.00 39.10 N
ATOM 15 C8 A B 520 23.137 144.499 108.010 1.00 40.46 C
ATOM 16 N7 A B 520 22.672 145.673 107.665 1.00 41.68 N
ATOM 17 C5 A B 520 23.762 146.518 107.811 1.00 41.72 C
ATOM 18 C6 A B 520 23.931 147.887 107.571 1.00 41.78 C
ATOM 19 N6 A B 520 22.970 148.674 107.080 1.00 43.04 N
ATOM 20 N1 A B 520 25.140 148.426 107.837 1.00 41.74 N
ATOM 21 C2 A B 520 26.112 147.628 108.292 1.00 41.97 C
ATOM 22 N3 A B 520 26.084 146.321 108.533 1.00 42.72 N
ATOM 23 C4 A B 520 24.865 145.819 108.268 1.00 41.80 C
ATOM 24 P U B 521 23.694 140.383 112.289 1.00 36.91 P
ATOM 25 OP1 U B 521 22.479 140.004 111.541 1.00 37.60 O
ATOM 26 OP2 U B 521 23.605 141.395 113.368 1.00 38.29 O
ATOM 27 O5' U B 521 24.359 139.062 112.876 1.00 35.04 O
TER
ATOM 2 P G A 519 16.717 137.317 104.680 1.00 43.05 P
ATOM 3 OP1 G A 519 16.494 136.551 105.930 1.00 43.93 O
ATOM 4 OP2 G A 519 15.709 138.311 104.231 1.00 40.27 O
ATOM 5 O5' G A 519 18.111 138.069 104.821 1.00 44.56 O
ATOM 6 C5' G A 519 19.310 137.364 105.192 1.00 43.54 C
ATOM 7 C4' G A 519 20.511 138.243 104.955 1.00 43.91 C
ATOM 8 O4' G A 519 20.486 138.693 103.572 1.00 45.78 O
ATOM 9 C3' G A 519 20.526 139.533 105.753 1.00 43.84 C
ATOM 10 O3' G A 519 21.038 139.337 107.067 1.00 42.87 O
ATOM 11 C2' G A 519 21.402 140.433 104.892 1.00 46.14 C
ATOM 12 O2' G A 519 22.783 140.159 105.009 1.00 47.10 O
ATOM 13 C1' G A 519 20.943 140.032 103.492 1.00 46.65 C
ATOM 14 N9 G A 519 19.850 140.867 103.002 1.00 48.89 N
ATOM 15 C8 G A 519 18.506 140.578 103.006 1.00 49.29 C
ATOM 16 N7 G A 519 17.776 141.534 102.501 1.00 49.22 N
ATOM 17 C5 G A 519 18.692 142.512 102.144 1.00 50.83 C
ATOM 18 C6 G A 519 18.493 143.775 101.551 1.00 51.95 C
ATOM 19 O6 G A 519 17.435 144.301 101.211 1.00 55.97 O
ATOM 20 N1 G A 519 19.694 144.448 101.361 1.00 52.67 N
ATOM 21 C2 G A 519 20.932 143.965 101.700 1.00 53.43 C
ATOM 22 N2 G A 519 21.977 144.766 101.433 1.00 54.77 N
ATOM 23 N3 G A 519 21.133 142.784 102.257 1.00 52.86 N
ATOM 24 C4 G A 519 19.976 142.115 102.447 1.00 51.20 C
ATOM 25 P A A 520 20.777 140.451 108.202 1.00 41.74 P
ATOM 26 OP1 A A 520 20.443 139.741 109.464 1.00 39.76 O
ATOM 27 OP2 A A 520 19.819 141.432 107.642 1.00 42.19 O
ATOM 28 O5' A A 520 22.197 141.156 108.377 1.00 39.39 O
TER
ATOM 1 O3' G B 519 21.038 139.337 107.067 1.00 42.87 O
ATOM 2 P A B 520 20.777 140.451 108.202 1.00 41.74 P
ATOM 3 OP1 A B 520 20.443 139.741 109.464 1.00 39.76 O
ATOM 4 OP2 A B 520 19.819 141.432 107.642 1.00 42.19 O
ATOM 5 O5' A B 520 22.197 141.156 108.377 1.00 39.39 O
ATOM 6 C5' A B 520 23.403 140.364 108.393 1.00 37.21 C
ATOM 7 C4' A B 520 24.573 141.177 108.888 1.00 35.30 C
ATOM 8 O4' A B 520 24.840 142.257 107.971 1.00 35.51 O
ATOM 9 C3' A B 520 24.396 141.841 110.238 1.00 34.94 C
ATOM 10 O3' A B 520 24.779 140.926 111.249 1.00 35.60 O
ATOM 11 C2' A B 520 25.385 142.996 110.169 1.00 35.39 C
ATOM 12 O2' A B 520 26.698 142.573 110.443 1.00 35.53 O
ATOM 13 C1' A B 520 25.316 143.375 108.690 1.00 36.04 C
ATOM 14 N9 A B 520 24.466 144.511 108.356 1.00 39.10 N
ATOM 15 C8 A B 520 23.137 144.499 108.010 1.00 40.46 C
ATOM 16 N7 A B 520 22.672 145.673 107.665 1.00 41.68 N
ATOM 17 C5 A B 520 23.762 146.518 107.811 1.00 41.72 C
ATOM 18 C6 A B 520 23.931 147.887 107.571 1.00 41.78 C
ATOM 19 N6 A B 520 22.970 148.674 107.080 1.00 43.04 N
ATOM 20 N1 A B 520 25.140 148.426 107.837 1.00 41.74 N
ATOM 21 C2 A B 520 26.112 147.628 108.292 1.00 41.97 C
ATOM 22 N3 A B 520 26.084 146.321 108.533 1.00 42.72 N
ATOM 23 C4 A B 520 24.865 145.819 108.268 1.00 41.80 C
ATOM 24 P U B 521 23.694 140.383 112.289 1.00 36.91 P
ATOM 25 OP1 U B 521 22.479 140.004 111.541 1.00 37.60 O
ATOM 26 OP2 U B 521 23.605 141.395 113.368 1.00 38.29 O
ATOM 27 O5' U B 521 24.359 139.062 112.876 1.00 35.04 O
TER
Atoms:
OP1: (16.494,136.551,105.930)
OP2: (15.709,138.311,104.231)
C3': (20.526,139.533,105.753)
C1': (20.943,140.032,103.492)
C5': (19.310,137.364,105.192)
O6: (17.435,144.301,101.211)
O4': (20.486,138.693,103.572)
C8: (18.506,140.578,103.006)
C2: (20.932,143.965,101.700)
C6: (18.493,143.775,101.551)
C5: (18.692,142.512,102.144)
C4: (19.976,142.115,102.447)
P: (16.717,137.317,104.680)
C4': (20.511,138.243,104.955)
C2': (21.402,140.433,104.892)
O2': (22.783,140.159,105.009)
N1: (19.694,144.448,101.361)
N2: (21.977,144.766,101.433)
N3: (21.133,142.784,102.257)
N7: (17.776,141.534,102.501)
N9: (19.850,140.867,103.002)
O5': (18.111,138.069,104.821)
O3': (21.038,139.337,107.067)
OP2: (15.709,138.311,104.231)
C3': (20.526,139.533,105.753)
C1': (20.943,140.032,103.492)
C5': (19.310,137.364,105.192)
O6: (17.435,144.301,101.211)
O4': (20.486,138.693,103.572)
C8: (18.506,140.578,103.006)
C2: (20.932,143.965,101.700)
C6: (18.493,143.775,101.551)
C5: (18.692,142.512,102.144)
C4: (19.976,142.115,102.447)
P: (16.717,137.317,104.680)
C4': (20.511,138.243,104.955)
C2': (21.402,140.433,104.892)
O2': (22.783,140.159,105.009)
N1: (19.694,144.448,101.361)
N2: (21.977,144.766,101.433)
N3: (21.133,142.784,102.257)
N7: (17.776,141.534,102.501)
N9: (19.850,140.867,103.002)
O5': (18.111,138.069,104.821)
O3': (21.038,139.337,107.067)
OP1: (20.443,139.741,109.464)
OP2: (19.819,141.432,107.642)
C3': (24.396,141.841,110.238)
C1': (25.316,143.375,108.690)
C5': (23.403,140.364,108.393)
O4': (24.840,142.257,107.971)
C8: (23.137,144.499,108.010)
O2': (26.698,142.573,110.443)
C6: (23.931,147.887,107.571)
C5: (23.762,146.518,107.811)
C4: (24.865,145.819,108.268)
P: (20.777,140.451,108.202)
C4': (24.573,141.177,108.888)
C2': (25.385,142.996,110.169)
C2: (26.112,147.628,108.292)
N1: (25.140,148.426,107.837)
N3: (26.084,146.321,108.533)
N6: (22.970,148.674,107.080)
N7: (22.672,145.673,107.665)
N9: (24.466,144.511,108.356)
O5': (22.197,141.156,108.377)
O3': (24.779,140.926,111.249)
OP2: (19.819,141.432,107.642)
C3': (24.396,141.841,110.238)
C1': (25.316,143.375,108.690)
C5': (23.403,140.364,108.393)
O4': (24.840,142.257,107.971)
C8: (23.137,144.499,108.010)
O2': (26.698,142.573,110.443)
C6: (23.931,147.887,107.571)
C5: (23.762,146.518,107.811)
C4: (24.865,145.819,108.268)
P: (20.777,140.451,108.202)
C4': (24.573,141.177,108.888)
C2': (25.385,142.996,110.169)
C2: (26.112,147.628,108.292)
N1: (25.140,148.426,107.837)
N3: (26.084,146.321,108.533)
N6: (22.970,148.674,107.080)
N7: (22.672,145.673,107.665)
N9: (24.466,144.511,108.356)
O5': (22.197,141.156,108.377)
O3': (24.779,140.926,111.249)
Image (generated by PyMOL):