ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MMS:C43:C46

Extra

PDB:
ATOM 1 O3' G A 42 10.687 -8.168 -17.410 1.00 48.03 O
ATOM 2 P U A 43 10.214 -7.545 -18.808 1.00 48.86 P
ATOM 3 OP1 U A 43 10.225 -8.631 -19.820 1.00 62.99 O
ATOM 4 OP2 U A 43 11.019 -6.314 -19.033 1.00 51.40 O
ATOM 5 O5' U A 43 8.700 -7.137 -18.549 1.00 35.14 O
ATOM 6 C5' U A 43 7.726 -8.151 -18.319 1.00 39.65 C
ATOM 7 C4' U A 43 6.342 -7.561 -18.289 1.00 45.60 C
ATOM 8 O4' U A 43 6.086 -6.907 -17.022 1.00 47.84 O
ATOM 9 C3' U A 43 6.030 -6.503 -19.328 1.00 46.03 C
ATOM 10 O3' U A 43 5.775 -7.078 -20.601 1.00 56.79 O
ATOM 11 C2' U A 43 4.829 -5.786 -18.713 1.00 44.04 C
ATOM 12 O2' U A 43 3.588 -6.431 -18.943 1.00 37.76 O
ATOM 13 C1' U A 43 5.168 -5.844 -17.219 1.00 44.47 C
ATOM 14 N1 U A 43 5.770 -4.589 -16.742 1.00 26.87 N
ATOM 15 C2 U A 43 4.909 -3.585 -16.329 1.00 22.09 C
ATOM 16 O2 U A 43 3.691 -3.719 -16.288 1.00 25.93 O
ATOM 17 N3 U A 43 5.519 -2.419 -15.962 1.00 13.38 N
ATOM 18 C4 U A 43 6.869 -2.159 -15.947 1.00 36.16 C
ATOM 19 O4 U A 43 7.263 -1.036 -15.621 1.00 36.16 O
ATOM 20 C5 U A 43 7.696 -3.256 -16.357 1.00 27.39 C
ATOM 21 C6 U A 43 7.131 -4.404 -16.729 1.00 19.00 C
ATOM 22 P A A 44 6.404 -6.394 -21.913 1.00 56.22 P
ATOM 23 OP1 A A 44 6.257 -7.345 -23.045 1.00 62.45 O
ATOM 24 OP2 A A 44 7.761 -5.866 -21.571 1.00 36.24 O
ATOM 25 O5' A A 44 5.420 -5.169 -22.156 1.00 37.34 O
TER

ATOM 1 O3' A B 45 2.158 0.858 -16.224 1.00 40.13 O
ATOM 2 P C B 46 2.770 0.451 -14.795 1.00 34.58 P
ATOM 3 OP1 C B 46 3.010 1.716 -14.062 1.00 42.37 O
ATOM 4 OP2 C B 46 3.901 -0.488 -15.013 1.00 24.95 O
ATOM 5 O5' C B 46 1.558 -0.333 -14.115 1.00 33.44 O
ATOM 6 C5' C B 46 1.711 -1.664 -13.564 1.00 27.30 C
ATOM 7 C4' C B 46 0.347 -2.298 -13.386 1.00 34.16 C
ATOM 8 O4' C B 46 -0.067 -2.943 -14.625 1.00 37.39 O
ATOM 9 C3' C B 46 0.219 -3.406 -12.354 1.00 33.88 C
ATOM 10 O3' C B 46 0.093 -2.924 -11.025 1.00 36.37 O
ATOM 11 C2' C B 46 -1.041 -4.120 -12.816 1.00 36.19 C
ATOM 12 O2' C B 46 -2.214 -3.415 -12.457 1.00 31.86 O
ATOM 13 C1' C B 46 -0.865 -4.089 -14.334 1.00 35.36 C
ATOM 14 N1 C B 46 -0.146 -5.311 -14.780 1.00 29.78 N
ATOM 15 C2 C B 46 -0.859 -6.537 -14.895 1.00 31.29 C
ATOM 16 O2 C B 46 -2.097 -6.552 -14.732 1.00 30.74 O
ATOM 17 N3 C B 46 -0.175 -7.667 -15.188 1.00 27.52 N
ATOM 18 C4 C B 46 1.146 -7.616 -15.390 1.00 35.55 C
ATOM 19 N4 C B 46 1.788 -8.764 -15.640 1.00 38.53 N
ATOM 20 C5 C B 46 1.874 -6.389 -15.338 1.00 27.77 C
ATOM 21 C6 C B 46 1.197 -5.275 -15.036 1.00 24.47 C
ATOM 22 P A B 47 1.072 -3.493 -9.886 1.00 38.47 P
ATOM 23 OP1 A B 47 0.484 -3.068 -8.588 1.00 56.40 O
ATOM 24 OP2 A B 47 2.477 -3.131 -10.212 1.00 22.01 O
ATOM 25 O5' A B 47 0.959 -5.079 -10.023 1.00 40.54 O
TER

Atoms:
C4: (6.869,-2.159,-15.947)
N3: (5.519,-2.419,-15.962)
OP1: (10.225,-8.631,-19.820)
OP2: (11.019,-6.314,-19.033)
C2: (4.909,-3.585,-16.329)
C1': (5.168,-5.844,-17.219)
C3': (6.030,-6.503,-19.328)
O5': (8.700,-7.137,-18.549)
O4': (6.086,-6.907,-17.022)
C5': (7.726,-8.151,-18.319)
P: (10.214,-7.545,-18.808)
C4': (6.342,-7.561,-18.289)
C2': (4.829,-5.786,-18.713)
O2': (3.588,-6.431,-18.943)
N1: (5.770,-4.589,-16.742)
O4: (7.263,-1.036,-15.621)
O2: (3.691,-3.719,-16.288)
C6: (7.131,-4.404,-16.729)
C5: (7.696,-3.256,-16.357)
O3': (5.775,-7.078,-20.601)
C2: (-0.859,-6.537,-14.895)
OP1: (3.010,1.716,-14.062)
OP2: (3.901,-0.488,-15.013)
C4: (1.146,-7.616,-15.390)
O5': (1.558,-0.333,-14.115)
C3': (0.219,-3.406,-12.354)
C1': (-0.865,-4.089,-14.334)
O4': (-0.067,-2.943,-14.625)
C5': (1.711,-1.664,-13.564)
P: (2.770,0.451,-14.795)
O2: (-2.097,-6.552,-14.732)
C4': (0.347,-2.298,-13.386)
C2': (-1.041,-4.120,-12.816)
O2': (-2.214,-3.415,-12.457)
N1: (-0.146,-5.311,-14.780)
N3: (-0.175,-7.667,-15.188)
N4: (1.788,-8.764,-15.640)
C6: (1.197,-5.275,-15.036)
C5: (1.874,-6.389,-15.338)
O3': (0.093,-2.924,-11.025)
Image (generated by PyMOL):
PyMOL image
show in jmol