Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A2079:A2105
Extra
PDB:
ATOM 1 O3' C A2078 109.266 110.865 31.822 1.00 41.47 O
ATOM 2 P U A2079 110.717 110.913 31.140 1.00 44.42 P
ATOM 3 OP1 U A2079 111.434 112.046 31.766 1.00 44.54 O
ATOM 4 OP2 U A2079 110.542 110.879 29.664 1.00 41.90 O
ATOM 5 O5' U A2079 111.444 109.567 31.570 1.00 42.32 O
ATOM 6 C5' U A2079 112.584 109.101 30.837 1.00 44.44 C
ATOM 7 C4' U A2079 113.197 107.926 31.537 1.00 45.87 C
ATOM 8 O4' U A2079 113.749 108.373 32.801 1.00 46.18 O
ATOM 9 C3' U A2079 112.240 106.785 31.870 1.00 48.03 C
ATOM 10 O3' U A2079 112.966 105.562 31.856 1.00 53.01 O
ATOM 11 C2' U A2079 111.865 107.091 33.316 1.00 48.09 C
ATOM 12 O2' U A2079 111.474 105.951 34.059 1.00 49.77 O
ATOM 13 C1' U A2079 113.199 107.600 33.840 1.00 45.84 C
ATOM 14 N1 U A2079 113.165 108.390 35.075 1.00 44.60 N
ATOM 15 C2 U A2079 113.656 107.782 36.207 1.00 45.08 C
ATOM 16 O2 U A2079 114.026 106.615 36.228 1.00 46.57 O
ATOM 17 N3 U A2079 113.694 108.576 37.321 1.00 44.61 N
ATOM 18 C4 U A2079 113.278 109.878 37.418 1.00 44.43 C
ATOM 19 O4 U A2079 113.534 110.508 38.440 1.00 45.86 O
ATOM 20 C5 U A2079 112.725 110.422 36.212 1.00 43.81 C
ATOM 21 C6 U A2079 112.694 109.679 35.109 1.00 43.47 C
ATOM 22 P G A2080 113.393 104.896 30.457 1.00 55.41 P
ATOM 23 OP1 G A2080 112.368 105.317 29.450 1.00 52.37 O
ATOM 24 OP2 G A2080 113.605 103.446 30.721 1.00 54.59 O
ATOM 25 O5' G A2080 114.830 105.554 30.167 1.00 57.21 O
TER
ATOM 1 O3' A B2104 116.527 107.911 39.070 1.00 55.00 O
ATOM 2 P C B2105 115.770 106.818 39.975 1.00 55.59 P
ATOM 3 OP1 C B2105 116.615 105.593 40.063 1.00 53.68 O
ATOM 4 OP2 C B2105 114.375 106.704 39.483 1.00 54.00 O
ATOM 5 O5' C B2105 115.715 107.529 41.403 1.00 54.32 O
ATOM 6 C5' C B2105 116.560 107.088 42.487 1.00 52.79 C
ATOM 7 C4' C B2105 117.097 108.268 43.269 1.00 52.05 C
ATOM 8 O4' C B2105 117.783 109.177 42.364 1.00 51.08 O
ATOM 9 C3' C B2105 116.087 109.197 43.916 1.00 52.55 C
ATOM 10 O3' C B2105 115.504 108.701 45.107 1.00 52.53 O
ATOM 11 C2' C B2105 116.928 110.439 44.182 1.00 51.48 C
ATOM 12 O2' C B2105 117.780 110.339 45.303 1.00 52.16 O
ATOM 13 C1' C B2105 117.780 110.487 42.919 1.00 49.82 C
ATOM 14 N1 C B2105 117.250 111.447 41.935 1.00 47.70 N
ATOM 15 C2 C B2105 117.349 112.824 42.220 1.00 47.78 C
ATOM 16 O2 C B2105 117.802 113.183 43.323 1.00 45.96 O
ATOM 17 N3 C B2105 116.941 113.723 41.291 1.00 47.74 N
ATOM 18 C4 C B2105 116.429 113.298 40.131 1.00 47.33 C
ATOM 19 N4 C B2105 116.073 114.219 39.234 1.00 46.47 N
ATOM 20 C5 C B2105 116.269 111.908 39.839 1.00 47.38 C
ATOM 21 C6 C B2105 116.691 111.027 40.759 1.00 47.61 C
ATOM 22 P A B2106 113.992 109.109 45.458 1.00 53.48 P
ATOM 23 OP1 A B2106 113.671 108.562 46.807 1.00 54.48 O
ATOM 24 OP2 A B2106 113.151 108.721 44.291 1.00 53.00 O
ATOM 25 O5' A B2106 114.035 110.703 45.548 1.00 50.05 O
TER
ATOM 2 P U A2079 110.717 110.913 31.140 1.00 44.42 P
ATOM 3 OP1 U A2079 111.434 112.046 31.766 1.00 44.54 O
ATOM 4 OP2 U A2079 110.542 110.879 29.664 1.00 41.90 O
ATOM 5 O5' U A2079 111.444 109.567 31.570 1.00 42.32 O
ATOM 6 C5' U A2079 112.584 109.101 30.837 1.00 44.44 C
ATOM 7 C4' U A2079 113.197 107.926 31.537 1.00 45.87 C
ATOM 8 O4' U A2079 113.749 108.373 32.801 1.00 46.18 O
ATOM 9 C3' U A2079 112.240 106.785 31.870 1.00 48.03 C
ATOM 10 O3' U A2079 112.966 105.562 31.856 1.00 53.01 O
ATOM 11 C2' U A2079 111.865 107.091 33.316 1.00 48.09 C
ATOM 12 O2' U A2079 111.474 105.951 34.059 1.00 49.77 O
ATOM 13 C1' U A2079 113.199 107.600 33.840 1.00 45.84 C
ATOM 14 N1 U A2079 113.165 108.390 35.075 1.00 44.60 N
ATOM 15 C2 U A2079 113.656 107.782 36.207 1.00 45.08 C
ATOM 16 O2 U A2079 114.026 106.615 36.228 1.00 46.57 O
ATOM 17 N3 U A2079 113.694 108.576 37.321 1.00 44.61 N
ATOM 18 C4 U A2079 113.278 109.878 37.418 1.00 44.43 C
ATOM 19 O4 U A2079 113.534 110.508 38.440 1.00 45.86 O
ATOM 20 C5 U A2079 112.725 110.422 36.212 1.00 43.81 C
ATOM 21 C6 U A2079 112.694 109.679 35.109 1.00 43.47 C
ATOM 22 P G A2080 113.393 104.896 30.457 1.00 55.41 P
ATOM 23 OP1 G A2080 112.368 105.317 29.450 1.00 52.37 O
ATOM 24 OP2 G A2080 113.605 103.446 30.721 1.00 54.59 O
ATOM 25 O5' G A2080 114.830 105.554 30.167 1.00 57.21 O
TER
ATOM 1 O3' A B2104 116.527 107.911 39.070 1.00 55.00 O
ATOM 2 P C B2105 115.770 106.818 39.975 1.00 55.59 P
ATOM 3 OP1 C B2105 116.615 105.593 40.063 1.00 53.68 O
ATOM 4 OP2 C B2105 114.375 106.704 39.483 1.00 54.00 O
ATOM 5 O5' C B2105 115.715 107.529 41.403 1.00 54.32 O
ATOM 6 C5' C B2105 116.560 107.088 42.487 1.00 52.79 C
ATOM 7 C4' C B2105 117.097 108.268 43.269 1.00 52.05 C
ATOM 8 O4' C B2105 117.783 109.177 42.364 1.00 51.08 O
ATOM 9 C3' C B2105 116.087 109.197 43.916 1.00 52.55 C
ATOM 10 O3' C B2105 115.504 108.701 45.107 1.00 52.53 O
ATOM 11 C2' C B2105 116.928 110.439 44.182 1.00 51.48 C
ATOM 12 O2' C B2105 117.780 110.339 45.303 1.00 52.16 O
ATOM 13 C1' C B2105 117.780 110.487 42.919 1.00 49.82 C
ATOM 14 N1 C B2105 117.250 111.447 41.935 1.00 47.70 N
ATOM 15 C2 C B2105 117.349 112.824 42.220 1.00 47.78 C
ATOM 16 O2 C B2105 117.802 113.183 43.323 1.00 45.96 O
ATOM 17 N3 C B2105 116.941 113.723 41.291 1.00 47.74 N
ATOM 18 C4 C B2105 116.429 113.298 40.131 1.00 47.33 C
ATOM 19 N4 C B2105 116.073 114.219 39.234 1.00 46.47 N
ATOM 20 C5 C B2105 116.269 111.908 39.839 1.00 47.38 C
ATOM 21 C6 C B2105 116.691 111.027 40.759 1.00 47.61 C
ATOM 22 P A B2106 113.992 109.109 45.458 1.00 53.48 P
ATOM 23 OP1 A B2106 113.671 108.562 46.807 1.00 54.48 O
ATOM 24 OP2 A B2106 113.151 108.721 44.291 1.00 53.00 O
ATOM 25 O5' A B2106 114.035 110.703 45.548 1.00 50.05 O
TER
Atoms:
C4: (113.278,109.878,37.418)
N3: (113.694,108.576,37.321)
OP1: (111.434,112.046,31.766)
OP2: (110.542,110.879,29.664)
C2: (113.656,107.782,36.207)
C1': (113.199,107.600,33.840)
C3': (112.240,106.785,31.870)
O5': (111.444,109.567,31.570)
O4': (113.749,108.373,32.801)
C5': (112.584,109.101,30.837)
P: (110.717,110.913,31.140)
C4': (113.197,107.926,31.537)
C2': (111.865,107.091,33.316)
O2': (111.474,105.951,34.059)
N1: (113.165,108.390,35.075)
O4: (113.534,110.508,38.440)
O2: (114.026,106.615,36.228)
C6: (112.694,109.679,35.109)
C5: (112.725,110.422,36.212)
O3': (112.966,105.562,31.856)
N3: (113.694,108.576,37.321)
OP1: (111.434,112.046,31.766)
OP2: (110.542,110.879,29.664)
C2: (113.656,107.782,36.207)
C1': (113.199,107.600,33.840)
C3': (112.240,106.785,31.870)
O5': (111.444,109.567,31.570)
O4': (113.749,108.373,32.801)
C5': (112.584,109.101,30.837)
P: (110.717,110.913,31.140)
C4': (113.197,107.926,31.537)
C2': (111.865,107.091,33.316)
O2': (111.474,105.951,34.059)
N1: (113.165,108.390,35.075)
O4: (113.534,110.508,38.440)
O2: (114.026,106.615,36.228)
C6: (112.694,109.679,35.109)
C5: (112.725,110.422,36.212)
O3': (112.966,105.562,31.856)
C2: (117.349,112.824,42.220)
OP1: (116.615,105.593,40.063)
OP2: (114.375,106.704,39.483)
C4: (116.429,113.298,40.131)
O5': (115.715,107.529,41.403)
C3': (116.087,109.197,43.916)
C1': (117.780,110.487,42.919)
O4': (117.783,109.177,42.364)
C5': (116.560,107.088,42.487)
P: (115.770,106.818,39.975)
O2: (117.802,113.183,43.323)
C4': (117.097,108.268,43.269)
C2': (116.928,110.439,44.182)
O2': (117.780,110.339,45.303)
N1: (117.250,111.447,41.935)
N3: (116.941,113.723,41.291)
N4: (116.073,114.219,39.234)
C6: (116.691,111.027,40.759)
C5: (116.269,111.908,39.839)
O3': (115.504,108.701,45.107)
OP1: (116.615,105.593,40.063)
OP2: (114.375,106.704,39.483)
C4: (116.429,113.298,40.131)
O5': (115.715,107.529,41.403)
C3': (116.087,109.197,43.916)
C1': (117.780,110.487,42.919)
O4': (117.783,109.177,42.364)
C5': (116.560,107.088,42.487)
P: (115.770,106.818,39.975)
O2: (117.802,113.183,43.323)
C4': (117.097,108.268,43.269)
C2': (116.928,110.439,44.182)
O2': (117.780,110.339,45.303)
N1: (117.250,111.447,41.935)
N3: (116.941,113.723,41.291)
N4: (116.073,114.219,39.234)
C6: (116.691,111.027,40.759)
C5: (116.269,111.908,39.839)
O3': (115.504,108.701,45.107)
Image (generated by PyMOL):