ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CME:0519:0520

Extra

PDB:
ATOM 1 O3' C A 518 16.821 134.576 103.029 1.00 44.51 O
ATOM 2 P G A 519 16.598 135.541 104.292 1.00 47.99 P
ATOM 3 OP1 G A 519 16.538 134.648 105.480 1.00 47.52 O
ATOM 4 OP2 G A 519 15.483 136.488 104.025 1.00 46.38 O
ATOM 5 O5' G A 519 17.952 136.377 104.387 1.00 48.74 O
ATOM 6 C5' G A 519 19.205 135.719 104.679 1.00 47.37 C
ATOM 7 C4' G A 519 20.347 136.697 104.568 1.00 46.16 C
ATOM 8 O4' G A 519 20.447 137.176 103.202 1.00 47.16 O
ATOM 9 C3' G A 519 20.193 137.965 105.380 1.00 44.36 C
ATOM 10 O3' G A 519 20.549 137.765 106.736 1.00 43.25 O
ATOM 11 C2' G A 519 21.126 138.922 104.656 1.00 46.51 C
ATOM 12 O2' G A 519 22.489 138.715 104.968 1.00 45.75 O
ATOM 13 C1' G A 519 20.868 138.532 103.201 1.00 48.14 C
ATOM 14 N9 G A 519 19.805 139.346 102.622 1.00 50.33 N
ATOM 15 C8 G A 519 18.466 139.053 102.573 1.00 50.35 C
ATOM 16 N7 G A 519 17.754 140.009 102.046 1.00 52.52 N
ATOM 17 C5 G A 519 18.681 140.989 101.719 1.00 52.69 C
ATOM 18 C6 G A 519 18.499 142.270 101.128 1.00 53.93 C
ATOM 19 O6 G A 519 17.444 142.820 100.783 1.00 55.57 O
ATOM 20 N1 G A 519 19.710 142.927 100.953 1.00 54.88 N
ATOM 21 C2 G A 519 20.940 142.424 101.298 1.00 55.17 C
ATOM 22 N2 G A 519 22.001 143.201 101.009 1.00 55.28 N
ATOM 23 N3 G A 519 21.120 141.243 101.872 1.00 54.11 N
ATOM 24 C4 G A 519 19.954 140.585 102.049 1.00 51.96 C
ATOM 25 P A A 520 20.401 138.974 107.781 1.00 43.67 P
ATOM 26 OP1 A A 520 20.076 138.395 109.116 1.00 42.73 O
ATOM 27 OP2 A A 520 19.481 139.968 107.164 1.00 43.55 O
ATOM 28 O5' A A 520 21.870 139.585 107.857 1.00 39.93 O
TER

ATOM 1 O3' G B 519 20.549 137.765 106.736 1.00 43.25 O
ATOM 2 P A B 520 20.401 138.974 107.781 1.00 43.67 P
ATOM 3 OP1 A B 520 20.076 138.395 109.116 1.00 42.73 O
ATOM 4 OP2 A B 520 19.481 139.968 107.164 1.00 43.55 O
ATOM 5 O5' A B 520 21.870 139.585 107.857 1.00 39.93 O
ATOM 6 C5' A B 520 22.999 138.735 108.119 1.00 37.95 C
ATOM 7 C4' A B 520 24.139 139.538 108.686 1.00 37.49 C
ATOM 8 O4' A B 520 24.421 140.623 107.781 1.00 38.10 O
ATOM 9 C3' A B 520 23.883 140.216 110.023 1.00 37.24 C
ATOM 10 O3' A B 520 24.249 139.323 111.058 1.00 38.51 O
ATOM 11 C2' A B 520 24.868 141.375 110.004 1.00 36.24 C
ATOM 12 O2' A B 520 26.160 140.978 110.399 1.00 37.35 O
ATOM 13 C1' A B 520 24.905 141.727 108.516 1.00 36.50 C
ATOM 14 N9 A B 520 24.147 142.907 108.127 1.00 33.71 N
ATOM 15 C8 A B 520 22.851 142.981 107.703 1.00 32.25 C
ATOM 16 N7 A B 520 22.463 144.195 107.408 1.00 33.32 N
ATOM 17 C5 A B 520 23.582 144.974 107.662 1.00 32.86 C
ATOM 18 C6 A B 520 23.820 146.353 107.550 1.00 32.57 C
ATOM 19 N6 A B 520 22.899 147.235 107.147 1.00 33.22 N
ATOM 20 N1 A B 520 25.052 146.803 107.873 1.00 31.22 N
ATOM 21 C2 A B 520 25.970 145.924 108.285 1.00 30.45 C
ATOM 22 N3 A B 520 25.864 144.609 108.437 1.00 31.52 N
ATOM 23 C4 A B 520 24.628 144.192 108.104 1.00 33.40 C
ATOM 24 P U B 521 23.253 139.035 112.275 1.00 40.84 P
ATOM 25 OP1 U B 521 21.877 138.840 111.753 1.00 41.59 O
ATOM 26 OP2 U B 521 23.513 140.076 113.301 1.00 40.99 O
ATOM 27 O5' U B 521 23.753 137.620 112.805 1.00 40.23 O
TER

Atoms:
OP1: (16.538,134.648,105.480)
OP2: (15.483,136.488,104.025)
C3': (20.193,137.965,105.380)
C1': (20.868,138.532,103.201)
C5': (19.205,135.719,104.679)
O6: (17.444,142.820,100.783)
O4': (20.447,137.176,103.202)
C8: (18.466,139.053,102.573)
C2: (20.940,142.424,101.298)
C6: (18.499,142.270,101.128)
C5: (18.681,140.989,101.719)
C4: (19.954,140.585,102.049)
P: (16.598,135.541,104.292)
C4': (20.347,136.697,104.568)
C2': (21.126,138.922,104.656)
O2': (22.489,138.715,104.968)
N1: (19.710,142.927,100.953)
N2: (22.001,143.201,101.009)
N3: (21.120,141.243,101.872)
N7: (17.754,140.009,102.046)
N9: (19.805,139.346,102.622)
O5': (17.952,136.377,104.387)
O3': (20.549,137.765,106.736)
OP1: (20.076,138.395,109.116)
OP2: (19.481,139.968,107.164)
C3': (23.883,140.216,110.023)
C1': (24.905,141.727,108.516)
C5': (22.999,138.735,108.119)
O4': (24.421,140.623,107.781)
C8: (22.851,142.981,107.703)
O2': (26.160,140.978,110.399)
C6: (23.820,146.353,107.550)
C5: (23.582,144.974,107.662)
C4: (24.628,144.192,108.104)
P: (20.401,138.974,107.781)
C4': (24.139,139.538,108.686)
C2': (24.868,141.375,110.004)
C2: (25.970,145.924,108.285)
N1: (25.052,146.803,107.873)
N3: (25.864,144.609,108.437)
N6: (22.899,147.235,107.147)
N7: (22.463,144.195,107.408)
N9: (24.147,142.907,108.127)
O5': (21.870,139.585,107.857)
O3': (24.249,139.323,111.058)
Image (generated by PyMOL):
PyMOL image
show in jmol