Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12880:12881
Extra
PDB:
ATOM 1 O3' A A2879 19.234 36.336 8.524 1.00 63.08 O
ATOM 2 P G A2880 19.511 36.439 10.086 1.00 60.49 P
ATOM 3 OP1 G A2880 19.292 37.837 10.498 1.00 60.77 O
ATOM 4 OP2 G A2880 20.807 35.836 10.337 1.00 60.03 O
ATOM 5 O5' G A2880 18.367 35.519 10.668 1.00 60.22 O
ATOM 6 C5' G A2880 18.260 35.264 12.043 1.00 59.70 C
ATOM 7 C4' G A2880 17.925 33.842 12.272 1.00 59.30 C
ATOM 8 O4' G A2880 18.519 33.037 11.246 1.00 59.35 O
ATOM 9 C3' G A2880 18.458 33.291 13.538 1.00 58.65 C
ATOM 10 O3' G A2880 17.604 33.577 14.604 1.00 58.51 O
ATOM 11 C2' G A2880 18.653 31.816 13.258 1.00 58.34 C
ATOM 12 O2' G A2880 17.449 31.105 13.446 1.00 58.31 O
ATOM 13 C1' G A2880 18.985 31.829 11.778 1.00 58.79 C
ATOM 14 N9 G A2880 20.426 31.773 11.556 1.00 58.63 N
ATOM 15 C8 G A2880 21.211 32.866 11.344 1.00 58.85 C
ATOM 16 N7 G A2880 22.439 32.540 11.134 1.00 58.65 N
ATOM 17 C5 G A2880 22.470 31.160 11.251 1.00 58.27 C
ATOM 18 C6 G A2880 23.539 30.248 11.180 1.00 57.93 C
ATOM 19 O6 G A2880 24.741 30.459 11.008 1.00 57.87 O
ATOM 20 N1 G A2880 23.122 28.948 11.348 1.00 57.63 N
ATOM 21 C2 G A2880 21.860 28.551 11.586 1.00 57.65 C
ATOM 22 N2 G A2880 21.703 27.238 11.706 1.00 57.34 N
ATOM 23 N3 G A2880 20.865 29.378 11.674 1.00 57.95 N
ATOM 24 C4 G A2880 21.234 30.660 11.503 1.00 58.25 C
ATOM 25 P A A2881 17.973 34.814 15.529 1.00 55.14 P
ATOM 26 OP1 A A2881 16.936 35.858 15.327 1.00 55.66 O
ATOM 27 OP2 A A2881 19.390 35.143 15.226 1.00 55.09 O
ATOM 28 O5' A A2881 17.858 34.178 16.985 1.00 54.53 O
TER
ATOM 1 O3' G B2880 17.604 33.577 14.604 1.00 58.51 O
ATOM 2 P A B2881 17.973 34.814 15.529 1.00 55.14 P
ATOM 3 OP1 A B2881 16.936 35.858 15.327 1.00 55.66 O
ATOM 4 OP2 A B2881 19.390 35.143 15.226 1.00 55.09 O
ATOM 5 O5' A B2881 17.858 34.178 16.985 1.00 54.53 O
ATOM 6 C5' A B2881 16.707 33.438 17.313 1.00 54.43 C
ATOM 7 C4' A B2881 16.923 32.497 18.462 1.00 53.80 C
ATOM 8 O4' A B2881 17.606 31.311 18.037 1.00 53.52 O
ATOM 9 C3' A B2881 17.755 32.982 19.621 1.00 53.44 C
ATOM 10 O3' A B2881 17.071 33.921 20.419 1.00 53.56 O
ATOM 11 C2' A B2881 18.035 31.678 20.345 1.00 52.86 C
ATOM 12 O2' A B2881 16.929 31.310 21.132 1.00 52.72 O
ATOM 13 C1' A B2881 18.140 30.690 19.183 1.00 52.94 C
ATOM 14 N9 A B2881 19.522 30.308 18.910 1.00 52.72 N
ATOM 15 C8 A B2881 20.414 30.861 18.051 1.00 52.97 C
ATOM 16 N7 A B2881 21.538 30.248 18.073 1.00 52.65 N
ATOM 17 C5 A B2881 21.354 29.237 18.995 1.00 52.17 C
ATOM 18 C6 A B2881 22.199 28.235 19.471 1.00 51.68 C
ATOM 19 N6 A B2881 23.438 28.054 19.037 1.00 51.59 N
ATOM 20 N1 A B2881 21.695 27.404 20.391 1.00 51.30 N
ATOM 21 C2 A B2881 20.422 27.564 20.798 1.00 51.40 C
ATOM 22 N3 A B2881 19.539 28.482 20.440 1.00 51.84 N
ATOM 23 C4 A B2881 20.105 29.275 19.523 1.00 52.20 C
ATOM 24 P A B2882 17.855 35.133 21.109 1.00 52.73 P
ATOM 25 OP1 A B2882 17.168 36.387 20.725 1.00 53.29 O
ATOM 26 OP2 A B2882 19.274 34.970 20.780 1.00 52.55 O
ATOM 27 O5' A B2882 17.632 34.845 22.623 1.00 52.26 O
TER
ATOM 2 P G A2880 19.511 36.439 10.086 1.00 60.49 P
ATOM 3 OP1 G A2880 19.292 37.837 10.498 1.00 60.77 O
ATOM 4 OP2 G A2880 20.807 35.836 10.337 1.00 60.03 O
ATOM 5 O5' G A2880 18.367 35.519 10.668 1.00 60.22 O
ATOM 6 C5' G A2880 18.260 35.264 12.043 1.00 59.70 C
ATOM 7 C4' G A2880 17.925 33.842 12.272 1.00 59.30 C
ATOM 8 O4' G A2880 18.519 33.037 11.246 1.00 59.35 O
ATOM 9 C3' G A2880 18.458 33.291 13.538 1.00 58.65 C
ATOM 10 O3' G A2880 17.604 33.577 14.604 1.00 58.51 O
ATOM 11 C2' G A2880 18.653 31.816 13.258 1.00 58.34 C
ATOM 12 O2' G A2880 17.449 31.105 13.446 1.00 58.31 O
ATOM 13 C1' G A2880 18.985 31.829 11.778 1.00 58.79 C
ATOM 14 N9 G A2880 20.426 31.773 11.556 1.00 58.63 N
ATOM 15 C8 G A2880 21.211 32.866 11.344 1.00 58.85 C
ATOM 16 N7 G A2880 22.439 32.540 11.134 1.00 58.65 N
ATOM 17 C5 G A2880 22.470 31.160 11.251 1.00 58.27 C
ATOM 18 C6 G A2880 23.539 30.248 11.180 1.00 57.93 C
ATOM 19 O6 G A2880 24.741 30.459 11.008 1.00 57.87 O
ATOM 20 N1 G A2880 23.122 28.948 11.348 1.00 57.63 N
ATOM 21 C2 G A2880 21.860 28.551 11.586 1.00 57.65 C
ATOM 22 N2 G A2880 21.703 27.238 11.706 1.00 57.34 N
ATOM 23 N3 G A2880 20.865 29.378 11.674 1.00 57.95 N
ATOM 24 C4 G A2880 21.234 30.660 11.503 1.00 58.25 C
ATOM 25 P A A2881 17.973 34.814 15.529 1.00 55.14 P
ATOM 26 OP1 A A2881 16.936 35.858 15.327 1.00 55.66 O
ATOM 27 OP2 A A2881 19.390 35.143 15.226 1.00 55.09 O
ATOM 28 O5' A A2881 17.858 34.178 16.985 1.00 54.53 O
TER
ATOM 1 O3' G B2880 17.604 33.577 14.604 1.00 58.51 O
ATOM 2 P A B2881 17.973 34.814 15.529 1.00 55.14 P
ATOM 3 OP1 A B2881 16.936 35.858 15.327 1.00 55.66 O
ATOM 4 OP2 A B2881 19.390 35.143 15.226 1.00 55.09 O
ATOM 5 O5' A B2881 17.858 34.178 16.985 1.00 54.53 O
ATOM 6 C5' A B2881 16.707 33.438 17.313 1.00 54.43 C
ATOM 7 C4' A B2881 16.923 32.497 18.462 1.00 53.80 C
ATOM 8 O4' A B2881 17.606 31.311 18.037 1.00 53.52 O
ATOM 9 C3' A B2881 17.755 32.982 19.621 1.00 53.44 C
ATOM 10 O3' A B2881 17.071 33.921 20.419 1.00 53.56 O
ATOM 11 C2' A B2881 18.035 31.678 20.345 1.00 52.86 C
ATOM 12 O2' A B2881 16.929 31.310 21.132 1.00 52.72 O
ATOM 13 C1' A B2881 18.140 30.690 19.183 1.00 52.94 C
ATOM 14 N9 A B2881 19.522 30.308 18.910 1.00 52.72 N
ATOM 15 C8 A B2881 20.414 30.861 18.051 1.00 52.97 C
ATOM 16 N7 A B2881 21.538 30.248 18.073 1.00 52.65 N
ATOM 17 C5 A B2881 21.354 29.237 18.995 1.00 52.17 C
ATOM 18 C6 A B2881 22.199 28.235 19.471 1.00 51.68 C
ATOM 19 N6 A B2881 23.438 28.054 19.037 1.00 51.59 N
ATOM 20 N1 A B2881 21.695 27.404 20.391 1.00 51.30 N
ATOM 21 C2 A B2881 20.422 27.564 20.798 1.00 51.40 C
ATOM 22 N3 A B2881 19.539 28.482 20.440 1.00 51.84 N
ATOM 23 C4 A B2881 20.105 29.275 19.523 1.00 52.20 C
ATOM 24 P A B2882 17.855 35.133 21.109 1.00 52.73 P
ATOM 25 OP1 A B2882 17.168 36.387 20.725 1.00 53.29 O
ATOM 26 OP2 A B2882 19.274 34.970 20.780 1.00 52.55 O
ATOM 27 O5' A B2882 17.632 34.845 22.623 1.00 52.26 O
TER
Atoms:
OP1: (19.292,37.837,10.498)
OP2: (20.807,35.836,10.337)
C3': (18.458,33.291,13.538)
C1': (18.985,31.829,11.778)
C5': (18.260,35.264,12.043)
O6: (24.741,30.459,11.008)
O4': (18.519,33.037,11.246)
C8: (21.211,32.866,11.344)
C2: (21.860,28.551,11.586)
C6: (23.539,30.248,11.180)
C5: (22.470,31.160,11.251)
C4: (21.234,30.660,11.503)
P: (19.511,36.439,10.086)
C4': (17.925,33.842,12.272)
C2': (18.653,31.816,13.258)
O2': (17.449,31.105,13.446)
N1: (23.122,28.948,11.348)
N2: (21.703,27.238,11.706)
N3: (20.865,29.378,11.674)
N7: (22.439,32.540,11.134)
N9: (20.426,31.773,11.556)
O5': (18.367,35.519,10.668)
O3': (17.604,33.577,14.604)
OP2: (20.807,35.836,10.337)
C3': (18.458,33.291,13.538)
C1': (18.985,31.829,11.778)
C5': (18.260,35.264,12.043)
O6: (24.741,30.459,11.008)
O4': (18.519,33.037,11.246)
C8: (21.211,32.866,11.344)
C2: (21.860,28.551,11.586)
C6: (23.539,30.248,11.180)
C5: (22.470,31.160,11.251)
C4: (21.234,30.660,11.503)
P: (19.511,36.439,10.086)
C4': (17.925,33.842,12.272)
C2': (18.653,31.816,13.258)
O2': (17.449,31.105,13.446)
N1: (23.122,28.948,11.348)
N2: (21.703,27.238,11.706)
N3: (20.865,29.378,11.674)
N7: (22.439,32.540,11.134)
N9: (20.426,31.773,11.556)
O5': (18.367,35.519,10.668)
O3': (17.604,33.577,14.604)
OP1: (16.936,35.858,15.327)
OP2: (19.390,35.143,15.226)
C3': (17.755,32.982,19.621)
C1': (18.140,30.690,19.183)
C5': (16.707,33.438,17.313)
O4': (17.606,31.311,18.037)
C8: (20.414,30.861,18.051)
O2': (16.929,31.310,21.132)
C6: (22.199,28.235,19.471)
C5: (21.354,29.237,18.995)
C4: (20.105,29.275,19.523)
P: (17.973,34.814,15.529)
C4': (16.923,32.497,18.462)
C2': (18.035,31.678,20.345)
C2: (20.422,27.564,20.798)
N1: (21.695,27.404,20.391)
N3: (19.539,28.482,20.440)
N6: (23.438,28.054,19.037)
N7: (21.538,30.248,18.073)
N9: (19.522,30.308,18.910)
O5': (17.858,34.178,16.985)
O3': (17.071,33.921,20.419)
OP2: (19.390,35.143,15.226)
C3': (17.755,32.982,19.621)
C1': (18.140,30.690,19.183)
C5': (16.707,33.438,17.313)
O4': (17.606,31.311,18.037)
C8: (20.414,30.861,18.051)
O2': (16.929,31.310,21.132)
C6: (22.199,28.235,19.471)
C5: (21.354,29.237,18.995)
C4: (20.105,29.275,19.523)
P: (17.973,34.814,15.529)
C4': (16.923,32.497,18.462)
C2': (18.035,31.678,20.345)
C2: (20.422,27.564,20.798)
N1: (21.695,27.404,20.391)
N3: (19.539,28.482,20.440)
N6: (23.438,28.054,19.037)
N7: (21.538,30.248,18.073)
N9: (19.522,30.308,18.910)
O5': (17.858,34.178,16.985)
O3': (17.071,33.921,20.419)
Image (generated by PyMOL):