Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A46:A47
Extra
PDB:
ATOM 1 O3' A A 45 7.667 53.988 19.292 1.00 25.75 O
ATOM 2 P A A 46 6.080 54.078 19.107 1.00 26.29 P
ATOM 3 OP1 A A 46 5.582 52.702 19.320 1.00 28.02 O
ATOM 4 OP2 A A 46 5.820 54.772 17.841 1.00 26.61 O
ATOM 5 O5' A A 46 5.577 54.982 20.313 1.00 25.13 O
ATOM 6 C5' A A 46 5.834 54.665 21.676 1.00 25.08 C
ATOM 7 C4' A A 46 5.504 55.853 22.552 1.00 25.54 C
ATOM 8 O4' A A 46 6.353 56.974 22.195 1.00 26.30 O
ATOM 9 C3' A A 46 4.099 56.404 22.367 1.00 23.27 C
ATOM 10 O3' A A 46 3.152 55.675 23.111 1.00 30.33 O
ATOM 11 C2' A A 46 4.241 57.850 22.818 1.00 26.07 C
ATOM 12 O2' A A 46 4.320 57.914 24.236 1.00 27.77 O
ATOM 13 C1' A A 46 5.614 58.182 22.235 1.00 25.93 C
ATOM 14 N9 A A 46 5.473 58.694 20.858 1.00 26.51 N
ATOM 15 C8 A A 46 5.611 57.997 19.683 1.00 26.23 C
ATOM 16 N7 A A 46 5.395 58.729 18.608 1.00 24.72 N
ATOM 17 C5 A A 46 5.104 59.988 19.103 1.00 26.62 C
ATOM 18 C6 A A 46 4.796 61.207 18.465 1.00 27.31 C
ATOM 19 N6 A A 46 4.726 61.354 17.133 1.00 27.72 N
ATOM 20 N1 A A 46 4.554 62.271 19.252 1.00 26.54 N
ATOM 21 C2 A A 46 4.624 62.123 20.579 1.00 26.89 C
ATOM 22 N3 A A 46 4.910 61.037 21.289 1.00 28.31 N
ATOM 23 C4 A A 46 5.146 59.984 20.487 1.00 26.59 C
ATOM 24 P A A 47 1.796 55.182 22.427 1.00 28.67 P
ATOM 25 OP1 A A 47 1.234 54.264 23.435 1.00 30.79 O
ATOM 26 OP2 A A 47 2.027 54.682 21.048 1.00 28.19 O
ATOM 27 O5' A A 47 0.985 56.542 22.344 1.00 28.52 O
TER
ATOM 1 O3' A B 46 3.152 55.675 23.111 1.00 30.33 O
ATOM 2 P A B 47 1.796 55.182 22.427 1.00 28.67 P
ATOM 3 OP1 A B 47 1.234 54.264 23.435 1.00 30.79 O
ATOM 4 OP2 A B 47 2.027 54.682 21.048 1.00 28.19 O
ATOM 5 O5' A B 47 0.985 56.542 22.344 1.00 28.52 O
ATOM 6 C5' A B 47 -0.350 56.488 21.867 1.00 31.10 C
ATOM 7 C4' A B 47 -1.288 57.101 22.870 1.00 30.34 C
ATOM 8 O4' A B 47 -0.936 58.485 23.112 1.00 34.42 O
ATOM 9 C3' A B 47 -2.744 57.154 22.454 1.00 32.44 C
ATOM 10 O3' A B 47 -3.376 55.909 22.672 1.00 34.11 O
ATOM 11 C2' A B 47 -3.294 58.287 23.312 1.00 35.72 C
ATOM 12 O2' A B 47 -3.547 57.835 24.636 1.00 33.75 O
ATOM 13 C1' A B 47 -2.102 59.245 23.348 1.00 35.57 C
ATOM 14 N9 A B 47 -2.186 60.273 22.296 1.00 34.38 N
ATOM 15 C8 A B 47 -1.600 60.262 21.055 1.00 33.33 C
ATOM 16 N7 A B 47 -1.863 61.331 20.342 1.00 34.93 N
ATOM 17 C5 A B 47 -2.671 62.091 21.173 1.00 33.17 C
ATOM 18 C6 A B 47 -3.290 63.338 21.006 1.00 38.23 C
ATOM 19 N6 A B 47 -3.185 64.082 19.899 1.00 40.16 N
ATOM 20 N1 A B 47 -4.040 63.804 22.036 1.00 44.24 N
ATOM 21 C2 A B 47 -4.150 63.064 23.150 1.00 39.83 C
ATOM 22 N3 A B 47 -3.607 61.877 23.419 1.00 37.31 N
ATOM 23 C4 A B 47 -2.874 61.451 22.380 1.00 34.81 C
ATOM 24 P A B 48 -4.305 55.258 21.540 1.00 37.35 P
ATOM 25 OP1 A B 48 -4.638 53.910 22.054 1.00 36.03 O
ATOM 26 OP2 A B 48 -3.592 55.389 20.248 1.00 36.43 O
ATOM 27 O5' A B 48 -5.582 56.189 21.544 1.00 41.18 O
TER
ATOM 2 P A A 46 6.080 54.078 19.107 1.00 26.29 P
ATOM 3 OP1 A A 46 5.582 52.702 19.320 1.00 28.02 O
ATOM 4 OP2 A A 46 5.820 54.772 17.841 1.00 26.61 O
ATOM 5 O5' A A 46 5.577 54.982 20.313 1.00 25.13 O
ATOM 6 C5' A A 46 5.834 54.665 21.676 1.00 25.08 C
ATOM 7 C4' A A 46 5.504 55.853 22.552 1.00 25.54 C
ATOM 8 O4' A A 46 6.353 56.974 22.195 1.00 26.30 O
ATOM 9 C3' A A 46 4.099 56.404 22.367 1.00 23.27 C
ATOM 10 O3' A A 46 3.152 55.675 23.111 1.00 30.33 O
ATOM 11 C2' A A 46 4.241 57.850 22.818 1.00 26.07 C
ATOM 12 O2' A A 46 4.320 57.914 24.236 1.00 27.77 O
ATOM 13 C1' A A 46 5.614 58.182 22.235 1.00 25.93 C
ATOM 14 N9 A A 46 5.473 58.694 20.858 1.00 26.51 N
ATOM 15 C8 A A 46 5.611 57.997 19.683 1.00 26.23 C
ATOM 16 N7 A A 46 5.395 58.729 18.608 1.00 24.72 N
ATOM 17 C5 A A 46 5.104 59.988 19.103 1.00 26.62 C
ATOM 18 C6 A A 46 4.796 61.207 18.465 1.00 27.31 C
ATOM 19 N6 A A 46 4.726 61.354 17.133 1.00 27.72 N
ATOM 20 N1 A A 46 4.554 62.271 19.252 1.00 26.54 N
ATOM 21 C2 A A 46 4.624 62.123 20.579 1.00 26.89 C
ATOM 22 N3 A A 46 4.910 61.037 21.289 1.00 28.31 N
ATOM 23 C4 A A 46 5.146 59.984 20.487 1.00 26.59 C
ATOM 24 P A A 47 1.796 55.182 22.427 1.00 28.67 P
ATOM 25 OP1 A A 47 1.234 54.264 23.435 1.00 30.79 O
ATOM 26 OP2 A A 47 2.027 54.682 21.048 1.00 28.19 O
ATOM 27 O5' A A 47 0.985 56.542 22.344 1.00 28.52 O
TER
ATOM 1 O3' A B 46 3.152 55.675 23.111 1.00 30.33 O
ATOM 2 P A B 47 1.796 55.182 22.427 1.00 28.67 P
ATOM 3 OP1 A B 47 1.234 54.264 23.435 1.00 30.79 O
ATOM 4 OP2 A B 47 2.027 54.682 21.048 1.00 28.19 O
ATOM 5 O5' A B 47 0.985 56.542 22.344 1.00 28.52 O
ATOM 6 C5' A B 47 -0.350 56.488 21.867 1.00 31.10 C
ATOM 7 C4' A B 47 -1.288 57.101 22.870 1.00 30.34 C
ATOM 8 O4' A B 47 -0.936 58.485 23.112 1.00 34.42 O
ATOM 9 C3' A B 47 -2.744 57.154 22.454 1.00 32.44 C
ATOM 10 O3' A B 47 -3.376 55.909 22.672 1.00 34.11 O
ATOM 11 C2' A B 47 -3.294 58.287 23.312 1.00 35.72 C
ATOM 12 O2' A B 47 -3.547 57.835 24.636 1.00 33.75 O
ATOM 13 C1' A B 47 -2.102 59.245 23.348 1.00 35.57 C
ATOM 14 N9 A B 47 -2.186 60.273 22.296 1.00 34.38 N
ATOM 15 C8 A B 47 -1.600 60.262 21.055 1.00 33.33 C
ATOM 16 N7 A B 47 -1.863 61.331 20.342 1.00 34.93 N
ATOM 17 C5 A B 47 -2.671 62.091 21.173 1.00 33.17 C
ATOM 18 C6 A B 47 -3.290 63.338 21.006 1.00 38.23 C
ATOM 19 N6 A B 47 -3.185 64.082 19.899 1.00 40.16 N
ATOM 20 N1 A B 47 -4.040 63.804 22.036 1.00 44.24 N
ATOM 21 C2 A B 47 -4.150 63.064 23.150 1.00 39.83 C
ATOM 22 N3 A B 47 -3.607 61.877 23.419 1.00 37.31 N
ATOM 23 C4 A B 47 -2.874 61.451 22.380 1.00 34.81 C
ATOM 24 P A B 48 -4.305 55.258 21.540 1.00 37.35 P
ATOM 25 OP1 A B 48 -4.638 53.910 22.054 1.00 36.03 O
ATOM 26 OP2 A B 48 -3.592 55.389 20.248 1.00 36.43 O
ATOM 27 O5' A B 48 -5.582 56.189 21.544 1.00 41.18 O
TER
Atoms:
OP1: (5.582,52.702,19.320)
OP2: (5.820,54.772,17.841)
C3': (4.099,56.404,22.367)
C1': (5.614,58.182,22.235)
C5': (5.834,54.665,21.676)
O4': (6.353,56.974,22.195)
C8: (5.611,57.997,19.683)
O2': (4.320,57.914,24.236)
C6: (4.796,61.207,18.465)
C5: (5.104,59.988,19.103)
C4: (5.146,59.984,20.487)
P: (6.080,54.078,19.107)
C4': (5.504,55.853,22.552)
C2': (4.241,57.850,22.818)
C2: (4.624,62.123,20.579)
N1: (4.554,62.271,19.252)
N3: (4.910,61.037,21.289)
N6: (4.726,61.354,17.133)
N7: (5.395,58.729,18.608)
N9: (5.473,58.694,20.858)
O5': (5.577,54.982,20.313)
O3': (3.152,55.675,23.111)
OP2: (5.820,54.772,17.841)
C3': (4.099,56.404,22.367)
C1': (5.614,58.182,22.235)
C5': (5.834,54.665,21.676)
O4': (6.353,56.974,22.195)
C8: (5.611,57.997,19.683)
O2': (4.320,57.914,24.236)
C6: (4.796,61.207,18.465)
C5: (5.104,59.988,19.103)
C4: (5.146,59.984,20.487)
P: (6.080,54.078,19.107)
C4': (5.504,55.853,22.552)
C2': (4.241,57.850,22.818)
C2: (4.624,62.123,20.579)
N1: (4.554,62.271,19.252)
N3: (4.910,61.037,21.289)
N6: (4.726,61.354,17.133)
N7: (5.395,58.729,18.608)
N9: (5.473,58.694,20.858)
O5': (5.577,54.982,20.313)
O3': (3.152,55.675,23.111)
OP1: (1.234,54.264,23.435)
OP2: (2.027,54.682,21.048)
C3': (-2.744,57.154,22.454)
C1': (-2.102,59.245,23.348)
C5': (-0.350,56.488,21.867)
O4': (-0.936,58.485,23.112)
C8: (-1.600,60.262,21.055)
O2': (-3.547,57.835,24.636)
C6: (-3.290,63.338,21.006)
C5: (-2.671,62.091,21.173)
C4: (-2.874,61.451,22.380)
P: (1.796,55.182,22.427)
C4': (-1.288,57.101,22.870)
C2': (-3.294,58.287,23.312)
C2: (-4.150,63.064,23.150)
N1: (-4.040,63.804,22.036)
N3: (-3.607,61.877,23.419)
N6: (-3.185,64.082,19.899)
N7: (-1.863,61.331,20.342)
N9: (-2.186,60.273,22.296)
O5': (0.985,56.542,22.344)
O3': (-3.376,55.909,22.672)
OP2: (2.027,54.682,21.048)
C3': (-2.744,57.154,22.454)
C1': (-2.102,59.245,23.348)
C5': (-0.350,56.488,21.867)
O4': (-0.936,58.485,23.112)
C8: (-1.600,60.262,21.055)
O2': (-3.547,57.835,24.636)
C6: (-3.290,63.338,21.006)
C5: (-2.671,62.091,21.173)
C4: (-2.874,61.451,22.380)
P: (1.796,55.182,22.427)
C4': (-1.288,57.101,22.870)
C2': (-3.294,58.287,23.312)
C2: (-4.150,63.064,23.150)
N1: (-4.040,63.804,22.036)
N3: (-3.607,61.877,23.419)
N6: (-3.185,64.082,19.899)
N7: (-1.863,61.331,20.342)
N9: (-2.186,60.273,22.296)
O5': (0.985,56.542,22.344)
O3': (-3.376,55.909,22.672)
Image (generated by PyMOL):