Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1375:A1376
Extra
PDB:
ATOM 1 O3' G A1374 -16.611 -24.706 30.313 1.00 0.01 O
ATOM 2 P G A1375 -15.389 -25.734 30.170 1.00 0.01 P
ATOM 3 OP1 G A1375 -14.302 -25.024 29.469 1.00 0.01 O
ATOM 4 OP2 G A1375 -15.910 -26.989 29.564 1.00 0.01 O
ATOM 5 O5' G A1375 -15.011 -26.013 31.696 1.00 0.01 O
ATOM 6 C5' G A1375 -14.467 -24.997 32.520 1.00 0.01 C
ATOM 7 C4' G A1375 -14.133 -25.525 33.894 1.00 0.01 C
ATOM 8 O4' G A1375 -15.272 -26.244 34.423 1.00 0.01 O
ATOM 9 C3' G A1375 -12.994 -26.532 33.988 1.00 0.01 C
ATOM 10 O3' G A1375 -11.714 -25.934 33.979 1.00 0.01 O
ATOM 11 C2' G A1375 -13.305 -27.231 35.301 1.00 0.01 C
ATOM 12 O2' G A1375 -12.884 -26.447 36.415 1.00 0.01 O
ATOM 13 C1' G A1375 -14.831 -27.270 35.280 1.00 0.01 C
ATOM 14 N9 G A1375 -15.349 -28.569 34.787 1.00 0.01 N
ATOM 15 C8 G A1375 -15.944 -28.873 33.590 1.00 0.01 C
ATOM 16 N7 G A1375 -16.291 -30.125 33.510 1.00 0.01 N
ATOM 17 C5 G A1375 -15.916 -30.705 34.696 1.00 0.01 C
ATOM 18 C6 G A1375 -16.036 -32.031 35.194 1.00 0.01 C
ATOM 19 O6 G A1375 -16.498 -33.043 34.697 1.00 0.01 O
ATOM 20 N1 G A1375 -15.512 -32.167 36.452 1.00 0.01 N
ATOM 21 C2 G A1375 -14.966 -31.161 37.160 1.00 0.01 C
ATOM 22 N2 G A1375 -14.529 -31.509 38.359 1.00 0.01 N
ATOM 23 N3 G A1375 -14.848 -29.916 36.743 1.00 0.01 N
ATOM 24 C4 G A1375 -15.334 -29.755 35.497 1.00 0.01 C
ATOM 25 P A A1376 -10.760 -26.005 32.662 1.00 8.59 P
ATOM 26 OP1 A A1376 -9.693 -24.979 32.855 1.00 8.59 O
ATOM 27 OP2 A A1376 -11.619 -25.903 31.466 1.00 8.59 O
ATOM 28 O5' A A1376 -10.128 -27.468 32.720 1.00 8.59 O
TER
ATOM 1 O3' G B1375 -11.714 -25.934 33.979 1.00 0.01 O
ATOM 2 P A B1376 -10.760 -26.005 32.662 1.00 8.59 P
ATOM 3 OP1 A B1376 -9.693 -24.979 32.855 1.00 8.59 O
ATOM 4 OP2 A B1376 -11.619 -25.903 31.466 1.00 8.59 O
ATOM 5 O5' A B1376 -10.128 -27.468 32.720 1.00 8.59 O
ATOM 6 C5' A B1376 -9.628 -28.009 33.933 1.00 8.59 C
ATOM 7 C4' A B1376 -8.120 -28.110 33.936 1.00 8.59 C
ATOM 8 O4' A B1376 -7.692 -28.696 35.185 1.00 8.59 O
ATOM 9 C3' A B1376 -7.491 -28.992 32.865 1.00 8.59 C
ATOM 10 O3' A B1376 -7.301 -28.303 31.633 1.00 8.59 O
ATOM 11 C2' A B1376 -6.188 -29.453 33.528 1.00 8.59 C
ATOM 12 O2' A B1376 -5.174 -28.464 33.424 1.00 8.59 O
ATOM 13 C1' A B1376 -6.596 -29.549 34.987 1.00 8.59 C
ATOM 14 N9 A B1376 -7.007 -30.896 35.389 1.00 8.67 N
ATOM 15 C8 A B1376 -8.196 -31.500 35.120 1.00 8.67 C
ATOM 16 N7 A B1376 -8.299 -32.670 35.688 1.00 8.67 N
ATOM 17 C5 A B1376 -7.125 -32.842 36.398 1.00 8.67 C
ATOM 18 C6 A B1376 -6.634 -33.879 37.208 1.00 8.67 C
ATOM 19 N6 A B1376 -7.286 -35.013 37.447 1.00 8.67 N
ATOM 20 N1 A B1376 -5.427 -33.734 37.777 1.00 8.67 N
ATOM 21 C2 A B1376 -4.766 -32.607 37.532 1.00 8.67 C
ATOM 22 N3 A B1376 -5.115 -31.558 36.779 1.00 8.67 N
ATOM 23 C4 A B1376 -6.326 -31.739 36.233 1.00 8.67 C
ATOM 24 P A B1377 -7.088 -29.116 30.255 1.00 0.01 P
ATOM 25 OP1 A B1377 -6.866 -28.118 29.172 1.00 0.01 O
ATOM 26 OP2 A B1377 -8.216 -30.083 30.137 1.00 0.01 O
ATOM 27 O5' A B1377 -5.746 -29.885 30.517 1.00 0.01 O
TER
ATOM 2 P G A1375 -15.389 -25.734 30.170 1.00 0.01 P
ATOM 3 OP1 G A1375 -14.302 -25.024 29.469 1.00 0.01 O
ATOM 4 OP2 G A1375 -15.910 -26.989 29.564 1.00 0.01 O
ATOM 5 O5' G A1375 -15.011 -26.013 31.696 1.00 0.01 O
ATOM 6 C5' G A1375 -14.467 -24.997 32.520 1.00 0.01 C
ATOM 7 C4' G A1375 -14.133 -25.525 33.894 1.00 0.01 C
ATOM 8 O4' G A1375 -15.272 -26.244 34.423 1.00 0.01 O
ATOM 9 C3' G A1375 -12.994 -26.532 33.988 1.00 0.01 C
ATOM 10 O3' G A1375 -11.714 -25.934 33.979 1.00 0.01 O
ATOM 11 C2' G A1375 -13.305 -27.231 35.301 1.00 0.01 C
ATOM 12 O2' G A1375 -12.884 -26.447 36.415 1.00 0.01 O
ATOM 13 C1' G A1375 -14.831 -27.270 35.280 1.00 0.01 C
ATOM 14 N9 G A1375 -15.349 -28.569 34.787 1.00 0.01 N
ATOM 15 C8 G A1375 -15.944 -28.873 33.590 1.00 0.01 C
ATOM 16 N7 G A1375 -16.291 -30.125 33.510 1.00 0.01 N
ATOM 17 C5 G A1375 -15.916 -30.705 34.696 1.00 0.01 C
ATOM 18 C6 G A1375 -16.036 -32.031 35.194 1.00 0.01 C
ATOM 19 O6 G A1375 -16.498 -33.043 34.697 1.00 0.01 O
ATOM 20 N1 G A1375 -15.512 -32.167 36.452 1.00 0.01 N
ATOM 21 C2 G A1375 -14.966 -31.161 37.160 1.00 0.01 C
ATOM 22 N2 G A1375 -14.529 -31.509 38.359 1.00 0.01 N
ATOM 23 N3 G A1375 -14.848 -29.916 36.743 1.00 0.01 N
ATOM 24 C4 G A1375 -15.334 -29.755 35.497 1.00 0.01 C
ATOM 25 P A A1376 -10.760 -26.005 32.662 1.00 8.59 P
ATOM 26 OP1 A A1376 -9.693 -24.979 32.855 1.00 8.59 O
ATOM 27 OP2 A A1376 -11.619 -25.903 31.466 1.00 8.59 O
ATOM 28 O5' A A1376 -10.128 -27.468 32.720 1.00 8.59 O
TER
ATOM 1 O3' G B1375 -11.714 -25.934 33.979 1.00 0.01 O
ATOM 2 P A B1376 -10.760 -26.005 32.662 1.00 8.59 P
ATOM 3 OP1 A B1376 -9.693 -24.979 32.855 1.00 8.59 O
ATOM 4 OP2 A B1376 -11.619 -25.903 31.466 1.00 8.59 O
ATOM 5 O5' A B1376 -10.128 -27.468 32.720 1.00 8.59 O
ATOM 6 C5' A B1376 -9.628 -28.009 33.933 1.00 8.59 C
ATOM 7 C4' A B1376 -8.120 -28.110 33.936 1.00 8.59 C
ATOM 8 O4' A B1376 -7.692 -28.696 35.185 1.00 8.59 O
ATOM 9 C3' A B1376 -7.491 -28.992 32.865 1.00 8.59 C
ATOM 10 O3' A B1376 -7.301 -28.303 31.633 1.00 8.59 O
ATOM 11 C2' A B1376 -6.188 -29.453 33.528 1.00 8.59 C
ATOM 12 O2' A B1376 -5.174 -28.464 33.424 1.00 8.59 O
ATOM 13 C1' A B1376 -6.596 -29.549 34.987 1.00 8.59 C
ATOM 14 N9 A B1376 -7.007 -30.896 35.389 1.00 8.67 N
ATOM 15 C8 A B1376 -8.196 -31.500 35.120 1.00 8.67 C
ATOM 16 N7 A B1376 -8.299 -32.670 35.688 1.00 8.67 N
ATOM 17 C5 A B1376 -7.125 -32.842 36.398 1.00 8.67 C
ATOM 18 C6 A B1376 -6.634 -33.879 37.208 1.00 8.67 C
ATOM 19 N6 A B1376 -7.286 -35.013 37.447 1.00 8.67 N
ATOM 20 N1 A B1376 -5.427 -33.734 37.777 1.00 8.67 N
ATOM 21 C2 A B1376 -4.766 -32.607 37.532 1.00 8.67 C
ATOM 22 N3 A B1376 -5.115 -31.558 36.779 1.00 8.67 N
ATOM 23 C4 A B1376 -6.326 -31.739 36.233 1.00 8.67 C
ATOM 24 P A B1377 -7.088 -29.116 30.255 1.00 0.01 P
ATOM 25 OP1 A B1377 -6.866 -28.118 29.172 1.00 0.01 O
ATOM 26 OP2 A B1377 -8.216 -30.083 30.137 1.00 0.01 O
ATOM 27 O5' A B1377 -5.746 -29.885 30.517 1.00 0.01 O
TER
Atoms:
OP1: (-14.302,-25.024,29.469)
OP2: (-15.910,-26.989,29.564)
C3': (-12.994,-26.532,33.988)
C1': (-14.831,-27.270,35.280)
C5': (-14.467,-24.997,32.520)
O6: (-16.498,-33.043,34.697)
O4': (-15.272,-26.244,34.423)
C8: (-15.944,-28.873,33.590)
C2: (-14.966,-31.161,37.160)
C6: (-16.036,-32.031,35.194)
C5: (-15.916,-30.705,34.696)
C4: (-15.334,-29.755,35.497)
P: (-15.389,-25.734,30.170)
C4': (-14.133,-25.525,33.894)
C2': (-13.305,-27.231,35.301)
O2': (-12.884,-26.447,36.415)
N1: (-15.512,-32.167,36.452)
N2: (-14.529,-31.509,38.359)
N3: (-14.848,-29.916,36.743)
N7: (-16.291,-30.125,33.510)
N9: (-15.349,-28.569,34.787)
O5': (-15.011,-26.013,31.696)
O3': (-11.714,-25.934,33.979)
OP2: (-15.910,-26.989,29.564)
C3': (-12.994,-26.532,33.988)
C1': (-14.831,-27.270,35.280)
C5': (-14.467,-24.997,32.520)
O6: (-16.498,-33.043,34.697)
O4': (-15.272,-26.244,34.423)
C8: (-15.944,-28.873,33.590)
C2: (-14.966,-31.161,37.160)
C6: (-16.036,-32.031,35.194)
C5: (-15.916,-30.705,34.696)
C4: (-15.334,-29.755,35.497)
P: (-15.389,-25.734,30.170)
C4': (-14.133,-25.525,33.894)
C2': (-13.305,-27.231,35.301)
O2': (-12.884,-26.447,36.415)
N1: (-15.512,-32.167,36.452)
N2: (-14.529,-31.509,38.359)
N3: (-14.848,-29.916,36.743)
N7: (-16.291,-30.125,33.510)
N9: (-15.349,-28.569,34.787)
O5': (-15.011,-26.013,31.696)
O3': (-11.714,-25.934,33.979)
OP1: (-9.693,-24.979,32.855)
OP2: (-11.619,-25.903,31.466)
C3': (-7.491,-28.992,32.865)
C1': (-6.596,-29.549,34.987)
C5': (-9.628,-28.009,33.933)
O4': (-7.692,-28.696,35.185)
C8: (-8.196,-31.500,35.120)
O2': (-5.174,-28.464,33.424)
C6: (-6.634,-33.879,37.208)
C5: (-7.125,-32.842,36.398)
C4: (-6.326,-31.739,36.233)
P: (-10.760,-26.005,32.662)
C4': (-8.120,-28.110,33.936)
C2': (-6.188,-29.453,33.528)
C2: (-4.766,-32.607,37.532)
N1: (-5.427,-33.734,37.777)
N3: (-5.115,-31.558,36.779)
N6: (-7.286,-35.013,37.447)
N7: (-8.299,-32.670,35.688)
N9: (-7.007,-30.896,35.389)
O5': (-10.128,-27.468,32.720)
O3': (-7.301,-28.303,31.633)
OP2: (-11.619,-25.903,31.466)
C3': (-7.491,-28.992,32.865)
C1': (-6.596,-29.549,34.987)
C5': (-9.628,-28.009,33.933)
O4': (-7.692,-28.696,35.185)
C8: (-8.196,-31.500,35.120)
O2': (-5.174,-28.464,33.424)
C6: (-6.634,-33.879,37.208)
C5: (-7.125,-32.842,36.398)
C4: (-6.326,-31.739,36.233)
P: (-10.760,-26.005,32.662)
C4': (-8.120,-28.110,33.936)
C2': (-6.188,-29.453,33.528)
C2: (-4.766,-32.607,37.532)
N1: (-5.427,-33.734,37.777)
N3: (-5.115,-31.558,36.779)
N6: (-7.286,-35.013,37.447)
N7: (-8.299,-32.670,35.688)
N9: (-7.007,-30.896,35.389)
O5': (-10.128,-27.468,32.720)
O3': (-7.301,-28.303,31.633)
Image (generated by PyMOL):