Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1878:A1880
Extra
PDB:
ATOM 1 O3' C A1877 -35.968 101.803 123.008 1.00 2.22 O
ATOM 2 P C A1878 -36.065 103.249 122.327 1.00 30.44 P
ATOM 3 OP1 C A1878 -36.946 103.046 121.144 1.00 32.64 O
ATOM 4 OP2 C A1878 -34.674 103.740 122.123 1.00 32.64 O
ATOM 5 O5' C A1878 -36.842 104.161 123.402 1.00 50.23 O
ATOM 6 C5' C A1878 -37.697 105.283 122.970 1.00 50.23 C
ATOM 7 C4' C A1878 -37.882 106.308 124.081 1.00 50.23 C
ATOM 8 O4' C A1878 -36.647 106.799 124.652 1.00 50.23 O
ATOM 9 C3' C A1878 -38.747 106.037 125.295 1.00 50.23 C
ATOM 10 O3' C A1878 -39.876 105.263 124.954 1.00 50.23 O
ATOM 11 C2' C A1878 -37.736 105.403 126.255 1.00 50.23 C
ATOM 12 O2' C A1878 -37.480 104.050 125.924 1.00 50.23 O
ATOM 13 C1' C A1878 -36.495 106.241 125.939 1.00 50.23 C
ATOM 14 N1 C A1878 -35.094 105.895 126.192 1.00 6.24 N
ATOM 15 C2 C A1878 -34.529 106.138 127.445 1.00 6.24 C
ATOM 16 O2 C A1878 -35.245 106.569 128.360 1.00 6.24 O
ATOM 17 N3 C A1878 -33.207 105.898 127.626 1.00 6.24 N
ATOM 18 C4 C A1878 -32.465 105.432 126.610 1.00 6.24 C
ATOM 19 N4 C A1878 -31.158 105.241 126.812 1.00 6.24 N
ATOM 20 C5 C A1878 -33.027 105.144 125.337 1.00 6.24 C
ATOM 21 C6 C A1878 -34.331 105.376 125.178 1.00 6.24 C
ATOM 22 P U A1879 -41.355 105.854 125.225 1.00 25.28 P
ATOM 23 OP1 U A1879 -41.736 105.525 126.626 1.00139.65 O
ATOM 24 OP2 U A1879 -42.223 105.401 124.110 1.00139.65 O
ATOM 25 O5' U A1879 -41.229 107.434 125.107 1.00 60.28 O
TER
ATOM 1 O3' U B1879 -40.606 109.580 128.378 1.00 60.28 O
ATOM 2 P G B1880 -39.456 110.329 127.539 1.00 20.68 P
ATOM 3 OP1 G B1880 -40.139 111.253 126.582 1.00 22.16 O
ATOM 4 OP2 G B1880 -38.436 109.351 127.032 1.00 22.16 O
ATOM 5 O5' G B1880 -38.752 111.269 128.614 1.00 33.05 O
ATOM 6 C5' G B1880 -38.100 110.737 129.787 1.00 33.05 C
ATOM 7 C4' G B1880 -37.118 111.754 130.319 1.00 33.05 C
ATOM 8 O4' G B1880 -36.034 111.884 129.363 1.00 33.05 O
ATOM 9 C3' G B1880 -37.712 113.145 130.503 1.00 33.05 C
ATOM 10 O3' G B1880 -37.097 113.800 131.612 1.00 33.05 O
ATOM 11 C2' G B1880 -37.312 113.848 129.207 1.00 33.05 C
ATOM 12 O2' G B1880 -37.187 115.251 129.307 1.00 33.05 O
ATOM 13 C1' G B1880 -35.962 113.205 128.888 1.00 33.05 C
ATOM 14 N9 G B1880 -35.696 113.122 127.459 1.00 0.79 N
ATOM 15 C8 G B1880 -36.639 113.056 126.463 1.00 0.79 C
ATOM 16 N7 G B1880 -36.122 112.908 125.276 1.00 0.79 N
ATOM 17 C5 G B1880 -34.755 112.894 125.497 1.00 0.79 C
ATOM 18 C6 G B1880 -33.705 112.741 124.588 1.00 0.79 C
ATOM 19 O6 G B1880 -33.775 112.552 123.363 1.00 0.79 O
ATOM 20 N1 G B1880 -32.468 112.806 125.219 1.00 0.79 N
ATOM 21 C2 G B1880 -32.284 112.970 126.548 1.00 0.79 C
ATOM 22 N2 G B1880 -31.020 113.011 126.938 1.00 0.79 N
ATOM 23 N3 G B1880 -33.266 113.087 127.425 1.00 0.79 N
ATOM 24 C4 G B1880 -34.469 113.046 126.833 1.00 0.79 C
ATOM 25 P C B1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 26 OP1 C B1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 27 OP2 C B1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 28 O5' C B1881 -38.686 114.513 133.485 1.00 13.46 O
TER
ATOM 2 P C A1878 -36.065 103.249 122.327 1.00 30.44 P
ATOM 3 OP1 C A1878 -36.946 103.046 121.144 1.00 32.64 O
ATOM 4 OP2 C A1878 -34.674 103.740 122.123 1.00 32.64 O
ATOM 5 O5' C A1878 -36.842 104.161 123.402 1.00 50.23 O
ATOM 6 C5' C A1878 -37.697 105.283 122.970 1.00 50.23 C
ATOM 7 C4' C A1878 -37.882 106.308 124.081 1.00 50.23 C
ATOM 8 O4' C A1878 -36.647 106.799 124.652 1.00 50.23 O
ATOM 9 C3' C A1878 -38.747 106.037 125.295 1.00 50.23 C
ATOM 10 O3' C A1878 -39.876 105.263 124.954 1.00 50.23 O
ATOM 11 C2' C A1878 -37.736 105.403 126.255 1.00 50.23 C
ATOM 12 O2' C A1878 -37.480 104.050 125.924 1.00 50.23 O
ATOM 13 C1' C A1878 -36.495 106.241 125.939 1.00 50.23 C
ATOM 14 N1 C A1878 -35.094 105.895 126.192 1.00 6.24 N
ATOM 15 C2 C A1878 -34.529 106.138 127.445 1.00 6.24 C
ATOM 16 O2 C A1878 -35.245 106.569 128.360 1.00 6.24 O
ATOM 17 N3 C A1878 -33.207 105.898 127.626 1.00 6.24 N
ATOM 18 C4 C A1878 -32.465 105.432 126.610 1.00 6.24 C
ATOM 19 N4 C A1878 -31.158 105.241 126.812 1.00 6.24 N
ATOM 20 C5 C A1878 -33.027 105.144 125.337 1.00 6.24 C
ATOM 21 C6 C A1878 -34.331 105.376 125.178 1.00 6.24 C
ATOM 22 P U A1879 -41.355 105.854 125.225 1.00 25.28 P
ATOM 23 OP1 U A1879 -41.736 105.525 126.626 1.00139.65 O
ATOM 24 OP2 U A1879 -42.223 105.401 124.110 1.00139.65 O
ATOM 25 O5' U A1879 -41.229 107.434 125.107 1.00 60.28 O
TER
ATOM 1 O3' U B1879 -40.606 109.580 128.378 1.00 60.28 O
ATOM 2 P G B1880 -39.456 110.329 127.539 1.00 20.68 P
ATOM 3 OP1 G B1880 -40.139 111.253 126.582 1.00 22.16 O
ATOM 4 OP2 G B1880 -38.436 109.351 127.032 1.00 22.16 O
ATOM 5 O5' G B1880 -38.752 111.269 128.614 1.00 33.05 O
ATOM 6 C5' G B1880 -38.100 110.737 129.787 1.00 33.05 C
ATOM 7 C4' G B1880 -37.118 111.754 130.319 1.00 33.05 C
ATOM 8 O4' G B1880 -36.034 111.884 129.363 1.00 33.05 O
ATOM 9 C3' G B1880 -37.712 113.145 130.503 1.00 33.05 C
ATOM 10 O3' G B1880 -37.097 113.800 131.612 1.00 33.05 O
ATOM 11 C2' G B1880 -37.312 113.848 129.207 1.00 33.05 C
ATOM 12 O2' G B1880 -37.187 115.251 129.307 1.00 33.05 O
ATOM 13 C1' G B1880 -35.962 113.205 128.888 1.00 33.05 C
ATOM 14 N9 G B1880 -35.696 113.122 127.459 1.00 0.79 N
ATOM 15 C8 G B1880 -36.639 113.056 126.463 1.00 0.79 C
ATOM 16 N7 G B1880 -36.122 112.908 125.276 1.00 0.79 N
ATOM 17 C5 G B1880 -34.755 112.894 125.497 1.00 0.79 C
ATOM 18 C6 G B1880 -33.705 112.741 124.588 1.00 0.79 C
ATOM 19 O6 G B1880 -33.775 112.552 123.363 1.00 0.79 O
ATOM 20 N1 G B1880 -32.468 112.806 125.219 1.00 0.79 N
ATOM 21 C2 G B1880 -32.284 112.970 126.548 1.00 0.79 C
ATOM 22 N2 G B1880 -31.020 113.011 126.938 1.00 0.79 N
ATOM 23 N3 G B1880 -33.266 113.087 127.425 1.00 0.79 N
ATOM 24 C4 G B1880 -34.469 113.046 126.833 1.00 0.79 C
ATOM 25 P C B1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 26 OP1 C B1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 27 OP2 C B1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 28 O5' C B1881 -38.686 114.513 133.485 1.00 13.46 O
TER
Atoms:
C2: (-34.529,106.138,127.445)
OP1: (-36.946,103.046,121.144)
OP2: (-34.674,103.740,122.123)
C4: (-32.465,105.432,126.610)
O5': (-36.842,104.161,123.402)
C3': (-38.747,106.037,125.295)
C1': (-36.495,106.241,125.939)
O4': (-36.647,106.799,124.652)
C5': (-37.697,105.283,122.970)
P: (-36.065,103.249,122.327)
O2: (-35.245,106.569,128.360)
C4': (-37.882,106.308,124.081)
C2': (-37.736,105.403,126.255)
O2': (-37.480,104.050,125.924)
N1: (-35.094,105.895,126.192)
N3: (-33.207,105.898,127.626)
N4: (-31.158,105.241,126.812)
C6: (-34.331,105.376,125.178)
C5: (-33.027,105.144,125.337)
O3': (-39.876,105.263,124.954)
OP1: (-36.946,103.046,121.144)
OP2: (-34.674,103.740,122.123)
C4: (-32.465,105.432,126.610)
O5': (-36.842,104.161,123.402)
C3': (-38.747,106.037,125.295)
C1': (-36.495,106.241,125.939)
O4': (-36.647,106.799,124.652)
C5': (-37.697,105.283,122.970)
P: (-36.065,103.249,122.327)
O2: (-35.245,106.569,128.360)
C4': (-37.882,106.308,124.081)
C2': (-37.736,105.403,126.255)
O2': (-37.480,104.050,125.924)
N1: (-35.094,105.895,126.192)
N3: (-33.207,105.898,127.626)
N4: (-31.158,105.241,126.812)
C6: (-34.331,105.376,125.178)
C5: (-33.027,105.144,125.337)
O3': (-39.876,105.263,124.954)
OP1: (-40.139,111.253,126.582)
OP2: (-38.436,109.351,127.032)
C3': (-37.712,113.145,130.503)
C1': (-35.962,113.205,128.888)
C5': (-38.100,110.737,129.787)
O6: (-33.775,112.552,123.363)
O4': (-36.034,111.884,129.363)
C8: (-36.639,113.056,126.463)
C2: (-32.284,112.970,126.548)
C6: (-33.705,112.741,124.588)
C5: (-34.755,112.894,125.497)
C4: (-34.469,113.046,126.833)
P: (-39.456,110.329,127.539)
C4': (-37.118,111.754,130.319)
C2': (-37.312,113.848,129.207)
O2': (-37.187,115.251,129.307)
N1: (-32.468,112.806,125.219)
N2: (-31.020,113.011,126.938)
N3: (-33.266,113.087,127.425)
N7: (-36.122,112.908,125.276)
N9: (-35.696,113.122,127.459)
O5': (-38.752,111.269,128.614)
O3': (-37.097,113.800,131.612)
OP2: (-38.436,109.351,127.032)
C3': (-37.712,113.145,130.503)
C1': (-35.962,113.205,128.888)
C5': (-38.100,110.737,129.787)
O6: (-33.775,112.552,123.363)
O4': (-36.034,111.884,129.363)
C8: (-36.639,113.056,126.463)
C2: (-32.284,112.970,126.548)
C6: (-33.705,112.741,124.588)
C5: (-34.755,112.894,125.497)
C4: (-34.469,113.046,126.833)
P: (-39.456,110.329,127.539)
C4': (-37.118,111.754,130.319)
C2': (-37.312,113.848,129.207)
O2': (-37.187,115.251,129.307)
N1: (-32.468,112.806,125.219)
N2: (-31.020,113.011,126.938)
N3: (-33.266,113.087,127.425)
N7: (-36.122,112.908,125.276)
N9: (-35.696,113.122,127.459)
O5': (-38.752,111.269,128.614)
O3': (-37.097,113.800,131.612)
Image (generated by PyMOL):