Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A1956:A1958
Extra
PDB:
ATOM 1 O3' C A1955 -38.327 101.846 121.527 1.00 39.34 O
ATOM 2 P C A1956 -38.781 103.320 121.140 1.00 49.64 P
ATOM 3 OP1 C A1956 -39.894 103.202 120.170 1.00 60.22 O
ATOM 4 OP2 C A1956 -37.558 104.074 120.773 1.00 58.28 O
ATOM 5 O5' C A1956 -39.311 103.934 122.524 1.00 45.49 O
ATOM 6 C5' C A1956 -40.633 103.729 122.988 1.00 42.75 C
ATOM 7 C4' C A1956 -40.950 104.837 123.956 1.00 43.48 C
ATOM 8 O4' C A1956 -39.888 104.851 124.940 1.00 42.26 O
ATOM 9 C3' C A1956 -40.942 106.197 123.266 1.00 62.09 C
ATOM 10 O3' C A1956 -42.181 106.973 123.395 1.00 74.10 O
ATOM 11 C2' C A1956 -39.740 106.945 123.870 1.00 65.74 C
ATOM 12 O2' C A1956 -40.043 108.308 124.163 1.00 65.43 O
ATOM 13 C1' C A1956 -39.339 106.145 125.121 1.00 53.45 C
ATOM 14 N1 C A1956 -37.838 106.033 125.263 1.00 46.09 N
ATOM 15 C2 C A1956 -37.135 106.236 126.479 1.00 48.71 C
ATOM 16 O2 C A1956 -37.701 106.515 127.551 1.00 44.71 O
ATOM 17 N3 C A1956 -35.787 106.109 126.457 1.00 51.10 N
ATOM 18 C4 C A1956 -35.149 105.810 125.319 1.00 44.68 C
ATOM 19 N4 C A1956 -33.810 105.700 125.350 1.00 43.43 N
ATOM 20 C5 C A1956 -35.846 105.609 124.094 1.00 37.11 C
ATOM 21 C6 C A1956 -37.166 105.729 124.117 1.00 41.35 C
ATOM 22 P U A1957 -43.550 106.498 124.084 1.00 92.06 P
ATOM 23 OP1 U A1957 -43.313 106.122 125.495 1.00 93.63 O
ATOM 24 OP2 U A1957 -44.253 105.580 123.169 1.00 92.78 O
ATOM 25 O5' U A1957 -44.355 107.869 124.057 1.00 89.69 O
TER
ATOM 1 O3' U B1957 -43.574 110.151 126.943 1.00 92.30 O
ATOM 2 P G B1958 -42.109 110.495 126.422 1.00 50.37 P
ATOM 3 OP1 G B1958 -42.258 111.159 125.100 1.00 51.76 O
ATOM 4 OP2 G B1958 -41.307 109.255 126.548 1.00 47.14 O
ATOM 5 O5' G B1958 -41.529 111.505 127.526 1.00 57.15 O
ATOM 6 C5' G B1958 -41.004 110.954 128.735 1.00 57.09 C
ATOM 7 C4' G B1958 -39.892 111.820 129.300 1.00 41.01 C
ATOM 8 O4' G B1958 -38.788 111.899 128.354 1.00 34.32 O
ATOM 9 C3' G B1958 -40.308 113.254 129.572 1.00 36.53 C
ATOM 10 O3' G B1958 -39.573 113.756 130.677 1.00 32.30 O
ATOM 11 C2' G B1958 -39.943 113.924 128.245 1.00 39.73 C
ATOM 12 O2' G B1958 -39.733 115.316 128.381 1.00 45.24 O
ATOM 13 C1' G B1958 -38.642 113.215 127.882 1.00 37.70 C
ATOM 14 N9 G B1958 -38.389 113.101 126.452 1.00 37.20 N
ATOM 15 C8 G B1958 -39.334 113.049 125.463 1.00 44.23 C
ATOM 16 N7 G B1958 -38.825 112.943 124.265 1.00 49.30 N
ATOM 17 C5 G B1958 -37.451 112.915 124.465 1.00 37.07 C
ATOM 18 C6 G B1958 -36.396 112.813 123.527 1.00 35.67 C
ATOM 19 O6 G B1958 -36.487 112.718 122.304 1.00 30.74 O
ATOM 20 N1 G B1958 -35.141 112.834 124.133 1.00 39.87 N
ATOM 21 C2 G B1958 -34.935 112.938 125.493 1.00 42.50 C
ATOM 22 N2 G B1958 -33.655 112.939 125.900 1.00 39.99 N
ATOM 23 N3 G B1958 -35.922 113.029 126.389 1.00 47.98 N
ATOM 24 C4 G B1958 -37.159 113.012 125.810 1.00 39.84 C
ATOM 25 P C B1959 -40.034 113.519 132.201 1.00 31.59 P
ATOM 26 OP1 C B1959 -38.919 114.015 133.057 1.00 40.14 O
ATOM 27 OP2 C B1959 -40.590 112.155 132.383 1.00 25.78 O
ATOM 28 O5' C B1959 -41.219 114.574 132.402 1.00 36.63 O
TER
ATOM 2 P C A1956 -38.781 103.320 121.140 1.00 49.64 P
ATOM 3 OP1 C A1956 -39.894 103.202 120.170 1.00 60.22 O
ATOM 4 OP2 C A1956 -37.558 104.074 120.773 1.00 58.28 O
ATOM 5 O5' C A1956 -39.311 103.934 122.524 1.00 45.49 O
ATOM 6 C5' C A1956 -40.633 103.729 122.988 1.00 42.75 C
ATOM 7 C4' C A1956 -40.950 104.837 123.956 1.00 43.48 C
ATOM 8 O4' C A1956 -39.888 104.851 124.940 1.00 42.26 O
ATOM 9 C3' C A1956 -40.942 106.197 123.266 1.00 62.09 C
ATOM 10 O3' C A1956 -42.181 106.973 123.395 1.00 74.10 O
ATOM 11 C2' C A1956 -39.740 106.945 123.870 1.00 65.74 C
ATOM 12 O2' C A1956 -40.043 108.308 124.163 1.00 65.43 O
ATOM 13 C1' C A1956 -39.339 106.145 125.121 1.00 53.45 C
ATOM 14 N1 C A1956 -37.838 106.033 125.263 1.00 46.09 N
ATOM 15 C2 C A1956 -37.135 106.236 126.479 1.00 48.71 C
ATOM 16 O2 C A1956 -37.701 106.515 127.551 1.00 44.71 O
ATOM 17 N3 C A1956 -35.787 106.109 126.457 1.00 51.10 N
ATOM 18 C4 C A1956 -35.149 105.810 125.319 1.00 44.68 C
ATOM 19 N4 C A1956 -33.810 105.700 125.350 1.00 43.43 N
ATOM 20 C5 C A1956 -35.846 105.609 124.094 1.00 37.11 C
ATOM 21 C6 C A1956 -37.166 105.729 124.117 1.00 41.35 C
ATOM 22 P U A1957 -43.550 106.498 124.084 1.00 92.06 P
ATOM 23 OP1 U A1957 -43.313 106.122 125.495 1.00 93.63 O
ATOM 24 OP2 U A1957 -44.253 105.580 123.169 1.00 92.78 O
ATOM 25 O5' U A1957 -44.355 107.869 124.057 1.00 89.69 O
TER
ATOM 1 O3' U B1957 -43.574 110.151 126.943 1.00 92.30 O
ATOM 2 P G B1958 -42.109 110.495 126.422 1.00 50.37 P
ATOM 3 OP1 G B1958 -42.258 111.159 125.100 1.00 51.76 O
ATOM 4 OP2 G B1958 -41.307 109.255 126.548 1.00 47.14 O
ATOM 5 O5' G B1958 -41.529 111.505 127.526 1.00 57.15 O
ATOM 6 C5' G B1958 -41.004 110.954 128.735 1.00 57.09 C
ATOM 7 C4' G B1958 -39.892 111.820 129.300 1.00 41.01 C
ATOM 8 O4' G B1958 -38.788 111.899 128.354 1.00 34.32 O
ATOM 9 C3' G B1958 -40.308 113.254 129.572 1.00 36.53 C
ATOM 10 O3' G B1958 -39.573 113.756 130.677 1.00 32.30 O
ATOM 11 C2' G B1958 -39.943 113.924 128.245 1.00 39.73 C
ATOM 12 O2' G B1958 -39.733 115.316 128.381 1.00 45.24 O
ATOM 13 C1' G B1958 -38.642 113.215 127.882 1.00 37.70 C
ATOM 14 N9 G B1958 -38.389 113.101 126.452 1.00 37.20 N
ATOM 15 C8 G B1958 -39.334 113.049 125.463 1.00 44.23 C
ATOM 16 N7 G B1958 -38.825 112.943 124.265 1.00 49.30 N
ATOM 17 C5 G B1958 -37.451 112.915 124.465 1.00 37.07 C
ATOM 18 C6 G B1958 -36.396 112.813 123.527 1.00 35.67 C
ATOM 19 O6 G B1958 -36.487 112.718 122.304 1.00 30.74 O
ATOM 20 N1 G B1958 -35.141 112.834 124.133 1.00 39.87 N
ATOM 21 C2 G B1958 -34.935 112.938 125.493 1.00 42.50 C
ATOM 22 N2 G B1958 -33.655 112.939 125.900 1.00 39.99 N
ATOM 23 N3 G B1958 -35.922 113.029 126.389 1.00 47.98 N
ATOM 24 C4 G B1958 -37.159 113.012 125.810 1.00 39.84 C
ATOM 25 P C B1959 -40.034 113.519 132.201 1.00 31.59 P
ATOM 26 OP1 C B1959 -38.919 114.015 133.057 1.00 40.14 O
ATOM 27 OP2 C B1959 -40.590 112.155 132.383 1.00 25.78 O
ATOM 28 O5' C B1959 -41.219 114.574 132.402 1.00 36.63 O
TER
Atoms:
C2: (-37.135,106.236,126.479)
OP1: (-39.894,103.202,120.170)
OP2: (-37.558,104.074,120.773)
C4: (-35.149,105.810,125.319)
O5': (-39.311,103.934,122.524)
C3': (-40.942,106.197,123.266)
C1': (-39.339,106.145,125.121)
O4': (-39.888,104.851,124.940)
C5': (-40.633,103.729,122.988)
P: (-38.781,103.320,121.140)
O2: (-37.701,106.515,127.551)
C4': (-40.950,104.837,123.956)
C2': (-39.740,106.945,123.870)
O2': (-40.043,108.308,124.163)
N1: (-37.838,106.033,125.263)
N3: (-35.787,106.109,126.457)
N4: (-33.810,105.700,125.350)
C6: (-37.166,105.729,124.117)
C5: (-35.846,105.609,124.094)
O3': (-42.181,106.973,123.395)
OP1: (-39.894,103.202,120.170)
OP2: (-37.558,104.074,120.773)
C4: (-35.149,105.810,125.319)
O5': (-39.311,103.934,122.524)
C3': (-40.942,106.197,123.266)
C1': (-39.339,106.145,125.121)
O4': (-39.888,104.851,124.940)
C5': (-40.633,103.729,122.988)
P: (-38.781,103.320,121.140)
O2: (-37.701,106.515,127.551)
C4': (-40.950,104.837,123.956)
C2': (-39.740,106.945,123.870)
O2': (-40.043,108.308,124.163)
N1: (-37.838,106.033,125.263)
N3: (-35.787,106.109,126.457)
N4: (-33.810,105.700,125.350)
C6: (-37.166,105.729,124.117)
C5: (-35.846,105.609,124.094)
O3': (-42.181,106.973,123.395)
OP1: (-42.258,111.159,125.100)
OP2: (-41.307,109.255,126.548)
C3': (-40.308,113.254,129.572)
C1': (-38.642,113.215,127.882)
C5': (-41.004,110.954,128.735)
O6: (-36.487,112.718,122.304)
O4': (-38.788,111.899,128.354)
C8: (-39.334,113.049,125.463)
C2: (-34.935,112.938,125.493)
C6: (-36.396,112.813,123.527)
C5: (-37.451,112.915,124.465)
C4: (-37.159,113.012,125.810)
P: (-42.109,110.495,126.422)
C4': (-39.892,111.820,129.300)
C2': (-39.943,113.924,128.245)
O2': (-39.733,115.316,128.381)
N1: (-35.141,112.834,124.133)
N2: (-33.655,112.939,125.900)
N3: (-35.922,113.029,126.389)
N7: (-38.825,112.943,124.265)
N9: (-38.389,113.101,126.452)
O5': (-41.529,111.505,127.526)
O3': (-39.573,113.756,130.677)
OP2: (-41.307,109.255,126.548)
C3': (-40.308,113.254,129.572)
C1': (-38.642,113.215,127.882)
C5': (-41.004,110.954,128.735)
O6: (-36.487,112.718,122.304)
O4': (-38.788,111.899,128.354)
C8: (-39.334,113.049,125.463)
C2: (-34.935,112.938,125.493)
C6: (-36.396,112.813,123.527)
C5: (-37.451,112.915,124.465)
C4: (-37.159,113.012,125.810)
P: (-42.109,110.495,126.422)
C4': (-39.892,111.820,129.300)
C2': (-39.943,113.924,128.245)
O2': (-39.733,115.316,128.381)
N1: (-35.141,112.834,124.133)
N2: (-33.655,112.939,125.900)
N3: (-35.922,113.029,126.389)
N7: (-38.825,112.943,124.265)
N9: (-38.389,113.101,126.452)
O5': (-41.529,111.505,127.526)
O3': (-39.573,113.756,130.677)
Image (generated by PyMOL):