Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1556:A1558
Extra
PDB:
ATOM 1 O3' A A1555 38.623 -63.517 -11.640 1.00 43.48 O
ATOM 2 P C A1556 39.508 -62.198 -11.327 1.00 39.48 P
ATOM 3 OP1 C A1556 38.682 -61.052 -10.833 1.00 42.97 O
ATOM 4 OP2 C A1556 40.394 -62.007 -12.485 1.00 41.76 O
ATOM 5 O5' C A1556 40.435 -62.611 -10.110 1.00 43.60 O
ATOM 6 C5' C A1556 41.601 -63.387 -10.348 1.00 48.25 C
ATOM 7 C4' C A1556 42.849 -62.673 -9.842 1.00 42.09 C
ATOM 8 O4' C A1556 43.859 -62.699 -10.884 1.00 40.54 O
ATOM 9 C3' C A1556 42.755 -61.229 -9.358 1.00 29.42 C
ATOM 10 O3' C A1556 43.638 -61.078 -8.265 1.00 24.91 O
ATOM 11 C2' C A1556 43.331 -60.427 -10.518 1.00 37.05 C
ATOM 12 O2' C A1556 43.989 -59.258 -10.075 1.00 39.81 O
ATOM 13 C1' C A1556 44.357 -61.403 -11.086 1.00 39.68 C
ATOM 14 N1 C A1556 44.617 -61.227 -12.523 1.00 40.03 N
ATOM 15 C2 C A1556 45.545 -60.284 -12.892 1.00 35.47 C
ATOM 16 O2 C A1556 46.109 -59.627 -12.002 1.00 31.50 O
ATOM 17 N3 C A1556 45.822 -60.100 -14.205 1.00 40.69 N
ATOM 18 C4 C A1556 45.209 -60.842 -15.125 1.00 39.39 C
ATOM 19 N4 C A1556 45.542 -60.638 -16.409 1.00 36.30 N
ATOM 20 C5 C A1556 44.243 -61.823 -14.776 1.00 38.83 C
ATOM 21 C6 C A1556 43.977 -61.978 -13.474 1.00 40.48 C
ATOM 22 P A A1557 43.069 -61.015 -6.781 1.00 34.86 P
ATOM 23 OP1 A A1557 43.673 -62.137 -6.047 1.00 34.69 O
ATOM 24 OP2 A A1557 41.598 -60.890 -6.857 1.00 34.47 O
ATOM 25 O5' A A1557 43.671 -59.661 -6.207 1.00 46.70 O
TER
ATOM 1 O3' A B1557 42.480 -55.082 -5.365 1.00 43.80 O
ATOM 2 P G B1558 42.098 -53.943 -6.459 1.00 45.23 P
ATOM 3 OP1 G B1558 41.795 -52.664 -5.755 1.00 40.82 O
ATOM 4 OP2 G B1558 41.099 -54.494 -7.422 1.00 48.79 O
ATOM 5 O5' G B1558 43.450 -53.728 -7.268 1.00 30.37 O
ATOM 6 C5' G B1558 44.512 -52.982 -6.710 1.00 33.33 C
ATOM 7 C4' G B1558 45.317 -52.407 -7.818 1.00 36.78 C
ATOM 8 O4' G B1558 45.719 -53.531 -8.638 1.00 39.81 O
ATOM 9 C3' G B1558 44.464 -51.541 -8.739 1.00 38.55 C
ATOM 10 O3' G B1558 44.485 -50.186 -8.328 1.00 38.72 O
ATOM 11 C2' G B1558 45.117 -51.744 -10.090 1.00 40.21 C
ATOM 12 O2' G B1558 46.244 -50.886 -10.165 1.00 35.75 O
ATOM 13 C1' G B1558 45.499 -53.235 -10.013 1.00 38.91 C
ATOM 14 N9 G B1558 44.442 -54.135 -10.484 1.00 32.36 N
ATOM 15 C8 G B1558 43.720 -55.014 -9.712 1.00 36.04 C
ATOM 16 N7 G B1558 42.817 -55.664 -10.387 1.00 39.79 N
ATOM 17 C5 G B1558 42.954 -55.196 -11.683 1.00 36.64 C
ATOM 18 C6 G B1558 42.253 -55.541 -12.837 1.00 40.76 C
ATOM 19 O6 G B1558 41.342 -56.376 -12.957 1.00 50.22 O
ATOM 20 N1 G B1558 42.698 -54.822 -13.941 1.00 38.99 N
ATOM 21 C2 G B1558 43.704 -53.901 -13.926 1.00 39.02 C
ATOM 22 N2 G B1558 43.981 -53.313 -15.094 1.00 42.54 N
ATOM 23 N3 G B1558 44.385 -53.579 -12.847 1.00 36.93 N
ATOM 24 C4 G B1558 43.955 -54.258 -11.765 1.00 33.09 C
ATOM 25 P G B1559 43.264 -49.231 -8.743 1.00 42.50 P
ATOM 26 OP1 G B1559 43.582 -47.869 -8.212 1.00 32.58 O
ATOM 27 OP2 G B1559 41.990 -49.905 -8.332 1.00 40.44 O
ATOM 28 O5' G B1559 43.305 -49.246 -10.341 1.00 36.79 O
TER
ATOM 2 P C A1556 39.508 -62.198 -11.327 1.00 39.48 P
ATOM 3 OP1 C A1556 38.682 -61.052 -10.833 1.00 42.97 O
ATOM 4 OP2 C A1556 40.394 -62.007 -12.485 1.00 41.76 O
ATOM 5 O5' C A1556 40.435 -62.611 -10.110 1.00 43.60 O
ATOM 6 C5' C A1556 41.601 -63.387 -10.348 1.00 48.25 C
ATOM 7 C4' C A1556 42.849 -62.673 -9.842 1.00 42.09 C
ATOM 8 O4' C A1556 43.859 -62.699 -10.884 1.00 40.54 O
ATOM 9 C3' C A1556 42.755 -61.229 -9.358 1.00 29.42 C
ATOM 10 O3' C A1556 43.638 -61.078 -8.265 1.00 24.91 O
ATOM 11 C2' C A1556 43.331 -60.427 -10.518 1.00 37.05 C
ATOM 12 O2' C A1556 43.989 -59.258 -10.075 1.00 39.81 O
ATOM 13 C1' C A1556 44.357 -61.403 -11.086 1.00 39.68 C
ATOM 14 N1 C A1556 44.617 -61.227 -12.523 1.00 40.03 N
ATOM 15 C2 C A1556 45.545 -60.284 -12.892 1.00 35.47 C
ATOM 16 O2 C A1556 46.109 -59.627 -12.002 1.00 31.50 O
ATOM 17 N3 C A1556 45.822 -60.100 -14.205 1.00 40.69 N
ATOM 18 C4 C A1556 45.209 -60.842 -15.125 1.00 39.39 C
ATOM 19 N4 C A1556 45.542 -60.638 -16.409 1.00 36.30 N
ATOM 20 C5 C A1556 44.243 -61.823 -14.776 1.00 38.83 C
ATOM 21 C6 C A1556 43.977 -61.978 -13.474 1.00 40.48 C
ATOM 22 P A A1557 43.069 -61.015 -6.781 1.00 34.86 P
ATOM 23 OP1 A A1557 43.673 -62.137 -6.047 1.00 34.69 O
ATOM 24 OP2 A A1557 41.598 -60.890 -6.857 1.00 34.47 O
ATOM 25 O5' A A1557 43.671 -59.661 -6.207 1.00 46.70 O
TER
ATOM 1 O3' A B1557 42.480 -55.082 -5.365 1.00 43.80 O
ATOM 2 P G B1558 42.098 -53.943 -6.459 1.00 45.23 P
ATOM 3 OP1 G B1558 41.795 -52.664 -5.755 1.00 40.82 O
ATOM 4 OP2 G B1558 41.099 -54.494 -7.422 1.00 48.79 O
ATOM 5 O5' G B1558 43.450 -53.728 -7.268 1.00 30.37 O
ATOM 6 C5' G B1558 44.512 -52.982 -6.710 1.00 33.33 C
ATOM 7 C4' G B1558 45.317 -52.407 -7.818 1.00 36.78 C
ATOM 8 O4' G B1558 45.719 -53.531 -8.638 1.00 39.81 O
ATOM 9 C3' G B1558 44.464 -51.541 -8.739 1.00 38.55 C
ATOM 10 O3' G B1558 44.485 -50.186 -8.328 1.00 38.72 O
ATOM 11 C2' G B1558 45.117 -51.744 -10.090 1.00 40.21 C
ATOM 12 O2' G B1558 46.244 -50.886 -10.165 1.00 35.75 O
ATOM 13 C1' G B1558 45.499 -53.235 -10.013 1.00 38.91 C
ATOM 14 N9 G B1558 44.442 -54.135 -10.484 1.00 32.36 N
ATOM 15 C8 G B1558 43.720 -55.014 -9.712 1.00 36.04 C
ATOM 16 N7 G B1558 42.817 -55.664 -10.387 1.00 39.79 N
ATOM 17 C5 G B1558 42.954 -55.196 -11.683 1.00 36.64 C
ATOM 18 C6 G B1558 42.253 -55.541 -12.837 1.00 40.76 C
ATOM 19 O6 G B1558 41.342 -56.376 -12.957 1.00 50.22 O
ATOM 20 N1 G B1558 42.698 -54.822 -13.941 1.00 38.99 N
ATOM 21 C2 G B1558 43.704 -53.901 -13.926 1.00 39.02 C
ATOM 22 N2 G B1558 43.981 -53.313 -15.094 1.00 42.54 N
ATOM 23 N3 G B1558 44.385 -53.579 -12.847 1.00 36.93 N
ATOM 24 C4 G B1558 43.955 -54.258 -11.765 1.00 33.09 C
ATOM 25 P G B1559 43.264 -49.231 -8.743 1.00 42.50 P
ATOM 26 OP1 G B1559 43.582 -47.869 -8.212 1.00 32.58 O
ATOM 27 OP2 G B1559 41.990 -49.905 -8.332 1.00 40.44 O
ATOM 28 O5' G B1559 43.305 -49.246 -10.341 1.00 36.79 O
TER
Atoms:
C2: (45.545,-60.284,-12.892)
OP1: (38.682,-61.052,-10.833)
OP2: (40.394,-62.007,-12.485)
C4: (45.209,-60.842,-15.125)
O5': (40.435,-62.611,-10.110)
C3': (42.755,-61.229,-9.358)
C1': (44.357,-61.403,-11.086)
O4': (43.859,-62.699,-10.884)
C5': (41.601,-63.387,-10.348)
P: (39.508,-62.198,-11.327)
O2: (46.109,-59.627,-12.002)
C4': (42.849,-62.673,-9.842)
C2': (43.331,-60.427,-10.518)
O2': (43.989,-59.258,-10.075)
N1: (44.617,-61.227,-12.523)
N3: (45.822,-60.100,-14.205)
N4: (45.542,-60.638,-16.409)
C6: (43.977,-61.978,-13.474)
C5: (44.243,-61.823,-14.776)
O3': (43.638,-61.078,-8.265)
OP1: (38.682,-61.052,-10.833)
OP2: (40.394,-62.007,-12.485)
C4: (45.209,-60.842,-15.125)
O5': (40.435,-62.611,-10.110)
C3': (42.755,-61.229,-9.358)
C1': (44.357,-61.403,-11.086)
O4': (43.859,-62.699,-10.884)
C5': (41.601,-63.387,-10.348)
P: (39.508,-62.198,-11.327)
O2: (46.109,-59.627,-12.002)
C4': (42.849,-62.673,-9.842)
C2': (43.331,-60.427,-10.518)
O2': (43.989,-59.258,-10.075)
N1: (44.617,-61.227,-12.523)
N3: (45.822,-60.100,-14.205)
N4: (45.542,-60.638,-16.409)
C6: (43.977,-61.978,-13.474)
C5: (44.243,-61.823,-14.776)
O3': (43.638,-61.078,-8.265)
OP1: (41.795,-52.664,-5.755)
OP2: (41.099,-54.494,-7.422)
C3': (44.464,-51.541,-8.739)
C1': (45.499,-53.235,-10.013)
C5': (44.512,-52.982,-6.710)
O6: (41.342,-56.376,-12.957)
O4': (45.719,-53.531,-8.638)
C8: (43.720,-55.014,-9.712)
C2: (43.704,-53.901,-13.926)
C6: (42.253,-55.541,-12.837)
C5: (42.954,-55.196,-11.683)
C4: (43.955,-54.258,-11.765)
P: (42.098,-53.943,-6.459)
C4': (45.317,-52.407,-7.818)
C2': (45.117,-51.744,-10.090)
O2': (46.244,-50.886,-10.165)
N1: (42.698,-54.822,-13.941)
N2: (43.981,-53.313,-15.094)
N3: (44.385,-53.579,-12.847)
N7: (42.817,-55.664,-10.387)
N9: (44.442,-54.135,-10.484)
O5': (43.450,-53.728,-7.268)
O3': (44.485,-50.186,-8.328)
OP2: (41.099,-54.494,-7.422)
C3': (44.464,-51.541,-8.739)
C1': (45.499,-53.235,-10.013)
C5': (44.512,-52.982,-6.710)
O6: (41.342,-56.376,-12.957)
O4': (45.719,-53.531,-8.638)
C8: (43.720,-55.014,-9.712)
C2: (43.704,-53.901,-13.926)
C6: (42.253,-55.541,-12.837)
C5: (42.954,-55.196,-11.683)
C4: (43.955,-54.258,-11.765)
P: (42.098,-53.943,-6.459)
C4': (45.317,-52.407,-7.818)
C2': (45.117,-51.744,-10.090)
O2': (46.244,-50.886,-10.165)
N1: (42.698,-54.822,-13.941)
N2: (43.981,-53.313,-15.094)
N3: (44.385,-53.579,-12.847)
N7: (42.817,-55.664,-10.387)
N9: (44.442,-54.135,-10.484)
O5': (43.450,-53.728,-7.268)
O3': (44.485,-50.186,-8.328)
Image (generated by PyMOL):