ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:01081:01082

Extra

PDB:
ATOM 1 O3' G A1080 36.116 100.085 128.490 1.00 38.92 O
ATOM 2 P U A1081 35.882 100.717 127.018 1.00 39.87 P
ATOM 3 OP1 U A1081 35.748 99.566 126.076 1.00 38.32 O
ATOM 4 OP2 U A1081 36.890 101.774 126.752 1.00 38.32 O
ATOM 5 O5' U A1081 34.467 101.442 127.108 1.00 39.32 O
ATOM 6 C5' U A1081 33.256 100.685 127.012 1.00 39.80 C
ATOM 7 C4' U A1081 32.063 101.605 127.016 1.00 40.94 C
ATOM 8 O4' U A1081 32.057 102.402 128.233 1.00 41.88 O
ATOM 9 C3' U A1081 32.038 102.667 125.939 1.00 41.82 C
ATOM 10 O3' U A1081 31.641 102.142 124.683 1.00 44.42 O
ATOM 11 C2' U A1081 31.008 103.636 126.500 1.00 40.57 C
ATOM 12 O2' U A1081 29.680 103.174 126.347 1.00 43.75 O
ATOM 13 C1' U A1081 31.380 103.625 127.985 1.00 40.50 C
ATOM 14 N1 U A1081 32.270 104.752 128.298 1.00 39.36 N
ATOM 15 C2 U A1081 31.664 105.956 128.580 1.00 39.06 C
ATOM 16 O2 U A1081 30.452 106.081 128.641 1.00 38.57 O
ATOM 17 N3 U A1081 32.523 107.010 128.784 1.00 39.18 N
ATOM 18 C4 U A1081 33.902 106.977 128.745 1.00 39.09 C
ATOM 19 O4 U A1081 34.534 108.026 128.903 1.00 40.65 O
ATOM 20 C5 U A1081 34.462 105.686 128.483 1.00 37.99 C
ATOM 21 C6 U A1081 33.646 104.639 128.277 1.00 39.21 C
ATOM 22 P A A1082 32.236 102.782 123.334 1.00 43.22 P
ATOM 23 OP1 A A1082 32.120 104.267 123.380 1.00 40.34 O
ATOM 24 OP2 A A1082 31.595 102.024 122.220 1.00 45.08 O
ATOM 25 O5' A A1082 33.784 102.418 123.391 1.00 44.95 O
TER

ATOM 1 O3' U B1081 31.641 102.142 124.683 1.00 44.42 O
ATOM 2 P A B1082 32.236 102.782 123.334 1.00 43.22 P
ATOM 3 OP1 A B1082 32.120 104.267 123.380 1.00 40.34 O
ATOM 4 OP2 A B1082 31.595 102.024 122.220 1.00 45.08 O
ATOM 5 O5' A B1082 33.784 102.418 123.391 1.00 44.95 O
ATOM 6 C5' A B1082 34.223 101.049 123.427 1.00 47.35 C
ATOM 7 C4' A B1082 35.097 100.767 122.232 1.00 49.85 C
ATOM 8 O4' A B1082 36.113 101.799 122.129 1.00 51.53 O
ATOM 9 C3' A B1082 35.837 99.436 122.218 1.00 50.87 C
ATOM 10 O3' A B1082 35.995 99.041 120.854 1.00 54.13 O
ATOM 11 C2' A B1082 37.201 99.827 122.785 1.00 51.16 C
ATOM 12 O2' A B1082 38.241 98.954 122.388 1.00 52.10 O
ATOM 13 C1' A B1082 37.396 101.210 122.159 1.00 50.85 C
ATOM 14 N9 A B1082 38.289 102.137 122.861 1.00 49.96 N
ATOM 15 C8 A B1082 38.803 102.058 124.134 1.00 49.91 C
ATOM 16 N7 A B1082 39.556 103.082 124.465 1.00 49.25 N
ATOM 17 C5 A B1082 39.541 103.886 123.333 1.00 49.68 C
ATOM 18 C6 A B1082 40.149 105.124 123.041 1.00 49.42 C
ATOM 19 N6 A B1082 40.907 105.797 123.910 1.00 50.18 N
ATOM 20 N1 A B1082 39.948 105.651 121.812 1.00 48.93 N
ATOM 21 C2 A B1082 39.178 104.976 120.944 1.00 49.76 C
ATOM 22 N3 A B1082 38.546 103.812 121.104 1.00 50.30 N
ATOM 23 C4 A B1082 38.772 103.313 122.334 1.00 49.87 C
ATOM 24 P A B1083 34.763 98.369 120.051 1.00 54.98 P
ATOM 25 OP1 A B1083 35.055 98.642 118.617 1.00 55.52 O
ATOM 26 OP2 A B1083 33.453 98.782 120.624 1.00 55.23 O
ATOM 27 O5' A B1083 34.943 96.810 120.308 1.00 50.58 O
TER

Atoms:
C4: (33.902,106.977,128.745)
N3: (32.523,107.010,128.784)
OP1: (35.748,99.566,126.076)
OP2: (36.890,101.774,126.752)
C2: (31.664,105.956,128.580)
C1': (31.380,103.625,127.985)
C3': (32.038,102.667,125.939)
O5': (34.467,101.442,127.108)
O4': (32.057,102.402,128.233)
C5': (33.256,100.685,127.012)
P: (35.882,100.717,127.018)
C4': (32.063,101.605,127.016)
C2': (31.008,103.636,126.500)
O2': (29.680,103.174,126.347)
N1: (32.270,104.752,128.298)
O4: (34.534,108.026,128.903)
O2: (30.452,106.081,128.641)
C6: (33.646,104.639,128.277)
C5: (34.462,105.686,128.483)
O3': (31.641,102.142,124.683)
OP1: (32.120,104.267,123.380)
OP2: (31.595,102.024,122.220)
C3': (35.837,99.436,122.218)
C1': (37.396,101.210,122.159)
C5': (34.223,101.049,123.427)
O4': (36.113,101.799,122.129)
C8: (38.803,102.058,124.134)
O2': (38.241,98.954,122.388)
C6: (40.149,105.124,123.041)
C5: (39.541,103.886,123.333)
C4: (38.772,103.313,122.334)
P: (32.236,102.782,123.334)
C4': (35.097,100.767,122.232)
C2': (37.201,99.827,122.785)
C2: (39.178,104.976,120.944)
N1: (39.948,105.651,121.812)
N3: (38.546,103.812,121.104)
N6: (40.907,105.797,123.910)
N7: (39.556,103.082,124.465)
N9: (38.289,102.137,122.861)
O5': (33.784,102.418,123.391)
O3': (35.995,99.041,120.854)
Image (generated by PyMOL):
PyMOL image
show in jmol