Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1954:A1956
Extra
PDB:
ATOM 1 O3' C A1953 -44.139 102.857 116.580 1.00 2.42 O
ATOM 2 P C A1954 -44.019 104.243 115.814 1.00 8.02 P
ATOM 3 OP1 C A1954 -44.677 104.073 114.485 1.00 8.02 O
ATOM 4 OP2 C A1954 -42.600 104.653 115.857 1.00 8.02 O
ATOM 5 O5' C A1954 -44.890 105.193 116.725 1.00 8.02 O
ATOM 6 C5' C A1954 -46.154 104.767 117.187 1.00 8.02 C
ATOM 7 C4' C A1954 -46.671 105.708 118.205 1.00 8.02 C
ATOM 8 O4' C A1954 -45.742 105.717 119.316 1.00 8.02 O
ATOM 9 C3' C A1954 -46.789 107.139 117.719 1.00 8.02 C
ATOM 10 O3' C A1954 -47.940 107.743 118.288 1.00 8.02 O
ATOM 11 C2' C A1954 -45.516 107.815 118.246 1.00 8.02 C
ATOM 12 O2' C A1954 -45.654 109.195 118.539 1.00 8.02 O
ATOM 13 C1' C A1954 -45.204 107.016 119.509 1.00 8.02 C
ATOM 14 N1 C A1954 -43.738 106.892 119.796 1.00 8.01 N
ATOM 15 C2 C A1954 -43.228 107.210 121.056 1.00 8.01 C
ATOM 16 O2 C A1954 -44.016 107.592 121.960 1.00 8.00 O
ATOM 17 N3 C A1954 -41.886 107.084 121.264 1.00 8.01 N
ATOM 18 C4 C A1954 -41.068 106.673 120.290 1.00 8.01 C
ATOM 19 N4 C A1954 -39.752 106.563 120.531 1.00 8.01 N
ATOM 20 C5 C A1954 -41.565 106.347 119.009 1.00 8.00 C
ATOM 21 C6 C A1954 -42.878 106.481 118.819 1.00 8.01 C
ATOM 22 P U A1955 -49.089 108.311 117.338 1.00 28.36 P
ATOM 23 OP1 U A1955 -49.378 107.277 116.346 1.00 28.36 O
ATOM 24 OP2 U A1955 -48.653 109.630 116.867 1.00 28.36 O
ATOM 25 O5' U A1955 -50.313 108.461 118.341 1.00 28.36 O
TER
ATOM 1 O3' U B1955 -49.303 111.738 120.279 1.00 28.36 O
ATOM 2 P G B1956 -47.722 111.982 120.314 1.00 0.03 P
ATOM 3 OP1 G B1956 -47.384 112.682 119.066 1.00 0.03 O
ATOM 4 OP2 G B1956 -47.086 110.658 120.591 1.00 0.03 O
ATOM 5 O5' G B1956 -47.501 112.959 121.565 1.00 0.03 O
ATOM 6 C5' G B1956 -47.144 112.441 122.854 1.00 0.03 C
ATOM 7 C4' G B1956 -46.186 113.350 123.600 1.00 0.03 C
ATOM 8 O4' G B1956 -44.880 113.266 122.983 1.00 0.03 O
ATOM 9 C3' G B1956 -46.560 114.828 123.602 1.00 0.03 C
ATOM 10 O3' G B1956 -46.079 115.460 124.792 1.00 0.03 O
ATOM 11 C2' G B1956 -45.795 115.368 122.403 1.00 0.03 C
ATOM 12 O2' G B1956 -45.505 116.743 122.493 1.00 0.03 O
ATOM 13 C1' G B1956 -44.517 114.511 122.416 1.00 0.03 C
ATOM 14 N9 G B1956 -43.969 114.229 121.088 1.00 0.01 N
ATOM 15 C8 G B1956 -44.760 113.886 120.052 1.00 0.01 C
ATOM 16 N7 G B1956 -44.090 113.627 118.974 1.00 0.01 N
ATOM 17 C5 G B1956 -42.764 113.774 119.307 1.00 0.01 C
ATOM 18 C6 G B1956 -41.595 113.591 118.511 1.00 0.01 C
ATOM 19 O6 G B1956 -41.508 113.272 117.323 1.00 0.01 O
ATOM 20 N1 G B1956 -40.427 113.825 119.210 1.00 0.01 N
ATOM 21 C2 G B1956 -40.399 114.193 120.510 1.00 0.01 C
ATOM 22 N2 G B1956 -39.165 114.377 120.969 1.00 0.01 N
ATOM 23 N3 G B1956 -41.483 114.363 121.275 1.00 0.01 N
ATOM 24 C4 G B1956 -42.656 114.141 120.623 1.00 0.01 C
ATOM 25 P C B1957 -46.784 115.184 126.206 1.00 3.87 P
ATOM 26 OP1 C B1957 -46.354 116.246 127.120 1.00 3.87 O
ATOM 27 OP2 C B1957 -46.496 113.805 126.567 1.00 3.87 O
ATOM 28 O5' C B1957 -48.338 115.330 125.878 1.00 3.87 O
TER
ATOM 2 P C A1954 -44.019 104.243 115.814 1.00 8.02 P
ATOM 3 OP1 C A1954 -44.677 104.073 114.485 1.00 8.02 O
ATOM 4 OP2 C A1954 -42.600 104.653 115.857 1.00 8.02 O
ATOM 5 O5' C A1954 -44.890 105.193 116.725 1.00 8.02 O
ATOM 6 C5' C A1954 -46.154 104.767 117.187 1.00 8.02 C
ATOM 7 C4' C A1954 -46.671 105.708 118.205 1.00 8.02 C
ATOM 8 O4' C A1954 -45.742 105.717 119.316 1.00 8.02 O
ATOM 9 C3' C A1954 -46.789 107.139 117.719 1.00 8.02 C
ATOM 10 O3' C A1954 -47.940 107.743 118.288 1.00 8.02 O
ATOM 11 C2' C A1954 -45.516 107.815 118.246 1.00 8.02 C
ATOM 12 O2' C A1954 -45.654 109.195 118.539 1.00 8.02 O
ATOM 13 C1' C A1954 -45.204 107.016 119.509 1.00 8.02 C
ATOM 14 N1 C A1954 -43.738 106.892 119.796 1.00 8.01 N
ATOM 15 C2 C A1954 -43.228 107.210 121.056 1.00 8.01 C
ATOM 16 O2 C A1954 -44.016 107.592 121.960 1.00 8.00 O
ATOM 17 N3 C A1954 -41.886 107.084 121.264 1.00 8.01 N
ATOM 18 C4 C A1954 -41.068 106.673 120.290 1.00 8.01 C
ATOM 19 N4 C A1954 -39.752 106.563 120.531 1.00 8.01 N
ATOM 20 C5 C A1954 -41.565 106.347 119.009 1.00 8.00 C
ATOM 21 C6 C A1954 -42.878 106.481 118.819 1.00 8.01 C
ATOM 22 P U A1955 -49.089 108.311 117.338 1.00 28.36 P
ATOM 23 OP1 U A1955 -49.378 107.277 116.346 1.00 28.36 O
ATOM 24 OP2 U A1955 -48.653 109.630 116.867 1.00 28.36 O
ATOM 25 O5' U A1955 -50.313 108.461 118.341 1.00 28.36 O
TER
ATOM 1 O3' U B1955 -49.303 111.738 120.279 1.00 28.36 O
ATOM 2 P G B1956 -47.722 111.982 120.314 1.00 0.03 P
ATOM 3 OP1 G B1956 -47.384 112.682 119.066 1.00 0.03 O
ATOM 4 OP2 G B1956 -47.086 110.658 120.591 1.00 0.03 O
ATOM 5 O5' G B1956 -47.501 112.959 121.565 1.00 0.03 O
ATOM 6 C5' G B1956 -47.144 112.441 122.854 1.00 0.03 C
ATOM 7 C4' G B1956 -46.186 113.350 123.600 1.00 0.03 C
ATOM 8 O4' G B1956 -44.880 113.266 122.983 1.00 0.03 O
ATOM 9 C3' G B1956 -46.560 114.828 123.602 1.00 0.03 C
ATOM 10 O3' G B1956 -46.079 115.460 124.792 1.00 0.03 O
ATOM 11 C2' G B1956 -45.795 115.368 122.403 1.00 0.03 C
ATOM 12 O2' G B1956 -45.505 116.743 122.493 1.00 0.03 O
ATOM 13 C1' G B1956 -44.517 114.511 122.416 1.00 0.03 C
ATOM 14 N9 G B1956 -43.969 114.229 121.088 1.00 0.01 N
ATOM 15 C8 G B1956 -44.760 113.886 120.052 1.00 0.01 C
ATOM 16 N7 G B1956 -44.090 113.627 118.974 1.00 0.01 N
ATOM 17 C5 G B1956 -42.764 113.774 119.307 1.00 0.01 C
ATOM 18 C6 G B1956 -41.595 113.591 118.511 1.00 0.01 C
ATOM 19 O6 G B1956 -41.508 113.272 117.323 1.00 0.01 O
ATOM 20 N1 G B1956 -40.427 113.825 119.210 1.00 0.01 N
ATOM 21 C2 G B1956 -40.399 114.193 120.510 1.00 0.01 C
ATOM 22 N2 G B1956 -39.165 114.377 120.969 1.00 0.01 N
ATOM 23 N3 G B1956 -41.483 114.363 121.275 1.00 0.01 N
ATOM 24 C4 G B1956 -42.656 114.141 120.623 1.00 0.01 C
ATOM 25 P C B1957 -46.784 115.184 126.206 1.00 3.87 P
ATOM 26 OP1 C B1957 -46.354 116.246 127.120 1.00 3.87 O
ATOM 27 OP2 C B1957 -46.496 113.805 126.567 1.00 3.87 O
ATOM 28 O5' C B1957 -48.338 115.330 125.878 1.00 3.87 O
TER
Atoms:
C2: (-43.228,107.210,121.056)
OP1: (-44.677,104.073,114.485)
OP2: (-42.600,104.653,115.857)
C4: (-41.068,106.673,120.290)
O5': (-44.890,105.193,116.725)
C3': (-46.789,107.139,117.719)
C1': (-45.204,107.016,119.509)
O4': (-45.742,105.717,119.316)
C5': (-46.154,104.767,117.187)
P: (-44.019,104.243,115.814)
O2: (-44.016,107.592,121.960)
C4': (-46.671,105.708,118.205)
C2': (-45.516,107.815,118.246)
O2': (-45.654,109.195,118.539)
N1: (-43.738,106.892,119.796)
N3: (-41.886,107.084,121.264)
N4: (-39.752,106.563,120.531)
C6: (-42.878,106.481,118.819)
C5: (-41.565,106.347,119.009)
O3': (-47.940,107.743,118.288)
OP1: (-44.677,104.073,114.485)
OP2: (-42.600,104.653,115.857)
C4: (-41.068,106.673,120.290)
O5': (-44.890,105.193,116.725)
C3': (-46.789,107.139,117.719)
C1': (-45.204,107.016,119.509)
O4': (-45.742,105.717,119.316)
C5': (-46.154,104.767,117.187)
P: (-44.019,104.243,115.814)
O2: (-44.016,107.592,121.960)
C4': (-46.671,105.708,118.205)
C2': (-45.516,107.815,118.246)
O2': (-45.654,109.195,118.539)
N1: (-43.738,106.892,119.796)
N3: (-41.886,107.084,121.264)
N4: (-39.752,106.563,120.531)
C6: (-42.878,106.481,118.819)
C5: (-41.565,106.347,119.009)
O3': (-47.940,107.743,118.288)
OP1: (-47.384,112.682,119.066)
OP2: (-47.086,110.658,120.591)
C3': (-46.560,114.828,123.602)
C1': (-44.517,114.511,122.416)
C5': (-47.144,112.441,122.854)
O6: (-41.508,113.272,117.323)
O4': (-44.880,113.266,122.983)
C8: (-44.760,113.886,120.052)
C2: (-40.399,114.193,120.510)
C6: (-41.595,113.591,118.511)
C5: (-42.764,113.774,119.307)
C4: (-42.656,114.141,120.623)
P: (-47.722,111.982,120.314)
C4': (-46.186,113.350,123.600)
C2': (-45.795,115.368,122.403)
O2': (-45.505,116.743,122.493)
N1: (-40.427,113.825,119.210)
N2: (-39.165,114.377,120.969)
N3: (-41.483,114.363,121.275)
N7: (-44.090,113.627,118.974)
N9: (-43.969,114.229,121.088)
O5': (-47.501,112.959,121.565)
O3': (-46.079,115.460,124.792)
OP2: (-47.086,110.658,120.591)
C3': (-46.560,114.828,123.602)
C1': (-44.517,114.511,122.416)
C5': (-47.144,112.441,122.854)
O6: (-41.508,113.272,117.323)
O4': (-44.880,113.266,122.983)
C8: (-44.760,113.886,120.052)
C2: (-40.399,114.193,120.510)
C6: (-41.595,113.591,118.511)
C5: (-42.764,113.774,119.307)
C4: (-42.656,114.141,120.623)
P: (-47.722,111.982,120.314)
C4': (-46.186,113.350,123.600)
C2': (-45.795,115.368,122.403)
O2': (-45.505,116.743,122.493)
N1: (-40.427,113.825,119.210)
N2: (-39.165,114.377,120.969)
N3: (-41.483,114.363,121.275)
N7: (-44.090,113.627,118.974)
N9: (-43.969,114.229,121.088)
O5': (-47.501,112.959,121.565)
O3': (-46.079,115.460,124.792)
Image (generated by PyMOL):