ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01081:01082

Extra

PDB:
ATOM 1 O3' G A1080 36.154 100.176 128.639 1.00 36.72 O
ATOM 2 P U A1081 35.931 100.816 127.172 1.00 39.85 P
ATOM 3 OP1 U A1081 35.807 99.680 126.211 1.00 37.50 O
ATOM 4 OP2 U A1081 36.951 101.873 126.947 1.00 35.66 O
ATOM 5 O5' U A1081 34.519 101.543 127.246 1.00 38.55 O
ATOM 6 C5' U A1081 33.311 100.787 127.179 1.00 39.19 C
ATOM 7 C4' U A1081 32.126 101.710 127.176 1.00 40.31 C
ATOM 8 O4' U A1081 32.152 102.536 128.372 1.00 42.11 O
ATOM 9 C3' U A1081 32.106 102.757 126.083 1.00 41.53 C
ATOM 10 O3' U A1081 31.719 102.226 124.823 1.00 44.15 O
ATOM 11 C2' U A1081 31.076 103.733 126.631 1.00 40.41 C
ATOM 12 O2' U A1081 29.751 103.266 126.491 1.00 42.93 O
ATOM 13 C1' U A1081 31.446 103.743 128.116 1.00 40.90 C
ATOM 14 N1 U A1081 32.299 104.901 128.423 1.00 39.54 N
ATOM 15 C2 U A1081 31.651 106.090 128.681 1.00 39.21 C
ATOM 16 O2 U A1081 30.442 106.171 128.751 1.00 40.03 O
ATOM 17 N3 U A1081 32.468 107.176 128.856 1.00 39.70 N
ATOM 18 C4 U A1081 33.844 107.190 128.818 1.00 39.72 C
ATOM 19 O4 U A1081 34.440 108.259 128.970 1.00 39.71 O
ATOM 20 C5 U A1081 34.448 105.911 128.599 1.00 37.94 C
ATOM 21 C6 U A1081 33.675 104.835 128.415 1.00 39.13 C
ATOM 22 P A A1082 32.276 102.907 123.474 1.00 44.09 P
ATOM 23 OP1 A A1082 32.147 104.387 123.582 1.00 40.04 O
ATOM 24 OP2 A A1082 31.635 102.195 122.339 1.00 45.05 O
ATOM 25 O5' A A1082 33.826 102.546 123.482 1.00 46.35 O
TER

ATOM 1 O3' U B1081 31.719 102.226 124.823 1.00 44.15 O
ATOM 2 P A B1082 32.276 102.907 123.474 1.00 44.09 P
ATOM 3 OP1 A B1082 32.147 104.387 123.582 1.00 40.04 O
ATOM 4 OP2 A B1082 31.635 102.195 122.339 1.00 45.05 O
ATOM 5 O5' A B1082 33.826 102.546 123.482 1.00 46.35 O
ATOM 6 C5' A B1082 34.272 101.181 123.559 1.00 49.36 C
ATOM 7 C4' A B1082 35.163 100.872 122.383 1.00 54.00 C
ATOM 8 O4' A B1082 36.184 101.900 122.263 1.00 56.26 O
ATOM 9 C3' A B1082 35.904 99.542 122.421 1.00 54.99 C
ATOM 10 O3' A B1082 36.080 99.106 121.075 1.00 58.43 O
ATOM 11 C2' A B1082 37.259 99.951 122.996 1.00 55.04 C
ATOM 12 O2' A B1082 38.305 99.069 122.650 1.00 56.91 O
ATOM 13 C1' A B1082 37.465 101.309 122.324 1.00 54.97 C
ATOM 14 N9 A B1082 38.358 102.249 123.007 1.00 54.37 N
ATOM 15 C8 A B1082 38.891 102.183 124.273 1.00 53.54 C
ATOM 16 N7 A B1082 39.641 103.212 124.586 1.00 53.08 N
ATOM 17 C5 A B1082 39.605 104.008 123.448 1.00 53.83 C
ATOM 18 C6 A B1082 40.204 105.244 123.136 1.00 53.68 C
ATOM 19 N6 A B1082 40.979 105.926 123.982 1.00 54.25 N
ATOM 20 N1 A B1082 39.976 105.760 121.909 1.00 53.76 N
ATOM 21 C2 A B1082 39.195 105.077 121.062 1.00 53.86 C
ATOM 22 N3 A B1082 38.575 103.913 121.238 1.00 54.43 N
ATOM 23 C4 A B1082 38.825 103.424 122.466 1.00 53.42 C
ATOM 24 P A B1083 34.841 98.475 120.257 1.00 59.32 P
ATOM 25 OP1 A B1083 35.098 98.830 118.835 1.00 59.91 O
ATOM 26 OP2 A B1083 33.549 98.857 120.887 1.00 60.22 O
ATOM 27 O5' A B1083 35.025 96.904 120.430 1.00 55.34 O
TER

Atoms:
C4: (33.844,107.190,128.818)
N3: (32.468,107.176,128.856)
OP1: (35.807,99.680,126.211)
OP2: (36.951,101.873,126.947)
C2: (31.651,106.090,128.681)
C1': (31.446,103.743,128.116)
C3': (32.106,102.757,126.083)
O5': (34.519,101.543,127.246)
O4': (32.152,102.536,128.372)
C5': (33.311,100.787,127.179)
P: (35.931,100.816,127.172)
C4': (32.126,101.710,127.176)
C2': (31.076,103.733,126.631)
O2': (29.751,103.266,126.491)
N1: (32.299,104.901,128.423)
O4: (34.440,108.259,128.970)
O2: (30.442,106.171,128.751)
C6: (33.675,104.835,128.415)
C5: (34.448,105.911,128.599)
O3': (31.719,102.226,124.823)
OP1: (32.147,104.387,123.582)
OP2: (31.635,102.195,122.339)
C3': (35.904,99.542,122.421)
C1': (37.465,101.309,122.324)
C5': (34.272,101.181,123.559)
O4': (36.184,101.900,122.263)
C8: (38.891,102.183,124.273)
O2': (38.305,99.069,122.650)
C6: (40.204,105.244,123.136)
C5: (39.605,104.008,123.448)
C4: (38.825,103.424,122.466)
P: (32.276,102.907,123.474)
C4': (35.163,100.872,122.383)
C2': (37.259,99.951,122.996)
C2: (39.195,105.077,121.062)
N1: (39.976,105.760,121.909)
N3: (38.575,103.913,121.238)
N6: (40.979,105.926,123.982)
N7: (39.641,103.212,124.586)
N9: (38.358,102.249,123.007)
O5': (33.826,102.546,123.482)
O3': (36.080,99.106,121.075)
Image (generated by PyMOL):
PyMOL image
show in jmol