ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01081:01082

Extra

PDB:
ATOM 1 O3' G A1080 36.022 100.097 128.428 1.00 39.66 O
ATOM 2 P U A1081 35.840 100.761 126.966 1.00 43.12 P
ATOM 3 OP1 U A1081 35.749 99.653 125.974 1.00 40.26 O
ATOM 4 OP2 U A1081 36.876 101.819 126.805 1.00 39.93 O
ATOM 5 O5' U A1081 34.424 101.486 127.013 1.00 38.64 O
ATOM 6 C5' U A1081 33.211 100.723 126.953 1.00 40.64 C
ATOM 7 C4' U A1081 32.015 101.640 126.956 1.00 41.32 C
ATOM 8 O4' U A1081 32.023 102.453 128.161 1.00 43.95 O
ATOM 9 C3' U A1081 31.983 102.692 125.868 1.00 42.50 C
ATOM 10 O3' U A1081 31.589 102.157 124.614 1.00 45.31 O
ATOM 11 C2' U A1081 30.963 103.677 126.423 1.00 42.16 C
ATOM 12 O2' U A1081 29.619 103.266 126.263 1.00 44.50 O
ATOM 13 C1' U A1081 31.326 103.666 127.910 1.00 42.73 C
ATOM 14 N1 U A1081 32.184 104.814 128.234 1.00 40.73 N
ATOM 15 C2 U A1081 31.546 106.012 128.476 1.00 40.98 C
ATOM 16 O2 U A1081 30.336 106.111 128.515 1.00 41.01 O
ATOM 17 N3 U A1081 32.375 107.087 128.671 1.00 41.81 N
ATOM 18 C4 U A1081 33.754 107.082 128.660 1.00 41.79 C
ATOM 19 O4 U A1081 34.364 108.142 128.821 1.00 42.23 O
ATOM 20 C5 U A1081 34.344 105.795 128.453 1.00 40.31 C
ATOM 21 C6 U A1081 33.557 104.729 128.256 1.00 41.35 C
ATOM 22 P A A1082 32.146 102.822 123.258 1.00 44.85 P
ATOM 23 OP1 A A1082 31.980 104.303 123.319 1.00 40.29 O
ATOM 24 OP2 A A1082 31.526 102.049 122.148 1.00 45.32 O
ATOM 25 O5' A A1082 33.707 102.513 123.280 1.00 45.82 O
TER

ATOM 1 O3' U B1081 31.589 102.157 124.614 1.00 45.31 O
ATOM 2 P A B1082 32.146 102.822 123.258 1.00 44.85 P
ATOM 3 OP1 A B1082 31.980 104.303 123.319 1.00 40.29 O
ATOM 4 OP2 A B1082 31.526 102.049 122.148 1.00 45.32 O
ATOM 5 O5' A B1082 33.707 102.513 123.280 1.00 45.82 O
ATOM 6 C5' A B1082 34.190 101.166 123.373 1.00 48.70 C
ATOM 7 C4' A B1082 35.067 100.857 122.187 1.00 52.14 C
ATOM 8 O4' A B1082 36.100 101.870 122.074 1.00 54.45 O
ATOM 9 C3' A B1082 35.791 99.518 122.225 1.00 53.41 C
ATOM 10 O3' A B1082 35.970 99.079 120.885 1.00 57.28 O
ATOM 11 C2' A B1082 37.144 99.904 122.815 1.00 53.04 C
ATOM 12 O2' A B1082 38.169 99.002 122.461 1.00 53.94 O
ATOM 13 C1' A B1082 37.375 101.268 122.162 1.00 52.80 C
ATOM 14 N9 A B1082 38.246 102.193 122.891 1.00 51.82 N
ATOM 15 C8 A B1082 38.709 102.117 124.184 1.00 52.03 C
ATOM 16 N7 A B1082 39.450 103.139 124.542 1.00 51.50 N
ATOM 17 C5 A B1082 39.484 103.938 123.407 1.00 51.88 C
ATOM 18 C6 A B1082 40.106 105.172 123.135 1.00 51.91 C
ATOM 19 N6 A B1082 40.822 105.854 124.032 1.00 52.71 N
ATOM 20 N1 A B1082 39.958 105.690 121.896 1.00 51.14 N
ATOM 21 C2 A B1082 39.224 105.015 121.005 1.00 51.38 C
ATOM 22 N3 A B1082 38.582 103.858 121.143 1.00 52.39 N
ATOM 23 C4 A B1082 38.756 103.363 122.381 1.00 51.70 C
ATOM 24 P A B1083 34.721 98.486 120.054 1.00 58.96 P
ATOM 25 OP1 A B1083 34.986 98.881 118.646 1.00 59.34 O
ATOM 26 OP2 A B1083 33.428 98.864 120.695 1.00 60.13 O
ATOM 27 O5' A B1083 34.882 96.910 120.187 1.00 54.91 O
TER

Atoms:
C4: (33.754,107.082,128.660)
N3: (32.375,107.087,128.671)
OP1: (35.749,99.653,125.974)
OP2: (36.876,101.819,126.805)
C2: (31.546,106.012,128.476)
C1': (31.326,103.666,127.910)
C3': (31.983,102.692,125.868)
O5': (34.424,101.486,127.013)
O4': (32.023,102.453,128.161)
C5': (33.211,100.723,126.953)
P: (35.840,100.761,126.966)
C4': (32.015,101.640,126.956)
C2': (30.963,103.677,126.423)
O2': (29.619,103.266,126.263)
N1: (32.184,104.814,128.234)
O4: (34.364,108.142,128.821)
O2: (30.336,106.111,128.515)
C6: (33.557,104.729,128.256)
C5: (34.344,105.795,128.453)
O3': (31.589,102.157,124.614)
OP1: (31.980,104.303,123.319)
OP2: (31.526,102.049,122.148)
C3': (35.791,99.518,122.225)
C1': (37.375,101.268,122.162)
C5': (34.190,101.166,123.373)
O4': (36.100,101.870,122.074)
C8: (38.709,102.117,124.184)
O2': (38.169,99.002,122.461)
C6: (40.106,105.172,123.135)
C5: (39.484,103.938,123.407)
C4: (38.756,103.363,122.381)
P: (32.146,102.822,123.258)
C4': (35.067,100.857,122.187)
C2': (37.144,99.904,122.815)
C2: (39.224,105.015,121.005)
N1: (39.958,105.690,121.896)
N3: (38.582,103.858,121.143)
N6: (40.822,105.854,124.032)
N7: (39.450,103.139,124.542)
N9: (38.246,102.193,122.891)
O5': (33.707,102.513,123.280)
O3': (35.970,99.079,120.885)
Image (generated by PyMOL):
PyMOL image
show in jmol