ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A1274:A1276

Extra

PDB:
ATOM 1 O3' U A1273 257.376 122.808 -7.949 1.00 55.31 O
ATOM 2 P C A1274 256.347 123.302 -6.800 1.00 49.61 P
ATOM 3 OP1 C A1274 256.681 124.695 -6.402 1.00 47.51 O
ATOM 4 OP2 C A1274 256.250 122.235 -5.755 1.00 47.51 O
ATOM 5 O5' C A1274 254.960 123.359 -7.582 1.00 49.61 O
ATOM 6 C5' C A1274 254.773 124.294 -8.675 1.00 49.61 C
ATOM 7 C4' C A1274 253.543 123.942 -9.487 1.00 49.61 C
ATOM 8 O4' C A1274 253.830 122.876 -10.431 1.00 49.61 O
ATOM 9 C3' C A1274 252.352 123.438 -8.685 1.00 49.61 C
ATOM 10 O3' C A1274 251.596 124.490 -8.093 1.00 49.61 O
ATOM 11 C2' C A1274 251.567 122.635 -9.715 1.00 49.61 C
ATOM 12 O2' C A1274 250.752 123.451 -10.528 1.00 49.61 O
ATOM 13 C1' C A1274 252.691 122.038 -10.562 1.00 49.61 C
ATOM 14 N1 C A1274 253.064 120.668 -10.158 1.00 47.51 N
ATOM 15 C2 C A1274 252.137 119.626 -10.321 1.00 47.51 C
ATOM 16 O2 C A1274 250.981 119.889 -10.706 1.00 47.51 O
ATOM 17 N3 C A1274 252.516 118.359 -10.041 1.00 47.51 N
ATOM 18 C4 C A1274 253.737 118.118 -9.582 1.00 47.51 C
ATOM 19 N4 C A1274 254.064 116.858 -9.327 1.00 47.51 N
ATOM 20 C5 C A1274 254.674 119.156 -9.361 1.00 47.51 C
ATOM 21 C6 C A1274 254.303 120.402 -9.658 1.00 47.51 C
ATOM 22 P G A1275 251.210 124.397 -6.536 1.00 53.11 P
ATOM 23 OP1 G A1275 250.121 125.390 -6.356 1.00 62.62 O
ATOM 24 OP2 G A1275 252.430 124.467 -5.687 1.00 62.62 O
ATOM 25 O5' G A1275 250.610 122.933 -6.376 1.00 53.11 O
TER

ATOM 1 O3' G B1275 247.996 121.348 -4.440 1.00 53.11 O
ATOM 2 P G B1276 248.172 121.850 -2.923 1.00 46.60 P
ATOM 3 OP1 G B1276 247.668 123.239 -2.843 1.00 62.89 O
ATOM 4 OP2 G B1276 249.518 121.536 -2.430 1.00 62.89 O
ATOM 5 O5' G B1276 247.136 120.940 -2.142 1.00 46.60 O
ATOM 6 C5' G B1276 247.419 120.474 -0.837 1.00 46.60 C
ATOM 7 C4' G B1276 247.789 119.037 -0.895 1.00 46.60 C
ATOM 8 O4' G B1276 248.712 118.869 -1.978 1.00 46.60 O
ATOM 9 C3' G B1276 248.468 118.520 0.359 1.00 46.60 C
ATOM 10 O3' G B1276 247.411 117.981 1.168 1.00 46.60 O
ATOM 11 C2' G B1276 249.384 117.437 -0.185 1.00 46.60 C
ATOM 12 O2' G B1276 248.633 116.256 -0.332 1.00 46.60 O
ATOM 13 C1' G B1276 249.708 117.952 -1.595 1.00 46.60 C
ATOM 14 N9 G B1276 251.006 118.581 -1.819 1.00 62.89 N
ATOM 15 C8 G B1276 251.334 119.894 -1.613 1.00 62.89 C
ATOM 16 N7 G B1276 252.545 120.186 -1.993 1.00 62.89 N
ATOM 17 C5 G B1276 253.059 118.983 -2.442 1.00 62.89 C
ATOM 18 C6 G B1276 254.333 118.675 -2.957 1.00 62.89 C
ATOM 19 O6 G B1276 255.302 119.429 -3.124 1.00 62.89 O
ATOM 20 N1 G B1276 254.429 117.339 -3.302 1.00 62.89 N
ATOM 21 C2 G B1276 253.425 116.426 -3.176 1.00 62.89 C
ATOM 22 N2 G B1276 253.690 115.224 -3.620 1.00 62.89 N
ATOM 23 N3 G B1276 252.241 116.689 -2.671 1.00 62.89 N
ATOM 24 C4 G B1276 252.125 117.981 -2.332 1.00 62.89 C
ATOM 25 P A B1277 247.731 117.094 2.478 1.00 57.16 P
ATOM 26 OP1 A B1277 246.773 117.588 3.508 1.00 60.84 O
ATOM 27 OP2 A B1277 249.190 117.076 2.780 1.00 60.84 O
ATOM 28 O5' A B1277 247.307 115.612 2.069 1.00 57.16 O
TER

Atoms:
C2: (252.137,119.626,-10.321)
OP1: (256.681,124.695,-6.402)
OP2: (256.250,122.235,-5.755)
C4: (253.737,118.118,-9.582)
O5': (254.960,123.359,-7.582)
C3': (252.352,123.438,-8.685)
C1': (252.691,122.038,-10.562)
O4': (253.830,122.876,-10.431)
C5': (254.773,124.294,-8.675)
P: (256.347,123.302,-6.800)
O2: (250.981,119.889,-10.706)
C4': (253.543,123.942,-9.487)
C2': (251.567,122.635,-9.715)
O2': (250.752,123.451,-10.528)
N1: (253.064,120.668,-10.158)
N3: (252.516,118.359,-10.041)
N4: (254.064,116.858,-9.327)
C6: (254.303,120.402,-9.658)
C5: (254.674,119.156,-9.361)
O3': (251.596,124.490,-8.093)
OP1: (247.668,123.239,-2.843)
OP2: (249.518,121.536,-2.430)
C3': (248.468,118.520,0.359)
C1': (249.708,117.952,-1.595)
C5': (247.419,120.474,-0.837)
O6: (255.302,119.429,-3.124)
O4': (248.712,118.869,-1.978)
C8: (251.334,119.894,-1.613)
C2: (253.425,116.426,-3.176)
C6: (254.333,118.675,-2.957)
C5: (253.059,118.983,-2.442)
C4: (252.125,117.981,-2.332)
P: (248.172,121.850,-2.923)
C4': (247.789,119.037,-0.895)
C2': (249.384,117.437,-0.185)
O2': (248.633,116.256,-0.332)
N1: (254.429,117.339,-3.302)
N2: (253.690,115.224,-3.620)
N3: (252.241,116.689,-2.671)
N7: (252.545,120.186,-1.993)
N9: (251.006,118.581,-1.819)
O5': (247.136,120.940,-2.142)
O3': (247.411,117.981,1.168)
Image (generated by PyMOL):
PyMOL image
show in jmol