Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01081:01082
Extra
PDB:
ATOM 1 O3' G A1080 36.009 100.036 128.426 1.00 44.94 O
ATOM 2 P U A1081 35.852 100.699 126.963 1.00 47.05 P
ATOM 3 OP1 U A1081 35.794 99.580 125.987 1.00 44.79 O
ATOM 4 OP2 U A1081 36.879 101.763 126.810 1.00 44.79 O
ATOM 5 O5' U A1081 34.427 101.409 126.983 1.00 45.40 O
ATOM 6 C5' U A1081 33.222 100.632 126.938 1.00 45.73 C
ATOM 7 C4' U A1081 32.016 101.536 126.956 1.00 46.72 C
ATOM 8 O4' U A1081 32.026 102.339 128.166 1.00 48.58 O
ATOM 9 C3' U A1081 31.969 102.595 125.876 1.00 47.47 C
ATOM 10 O3' U A1081 31.567 102.070 124.623 1.00 49.94 O
ATOM 11 C2' U A1081 30.951 103.572 126.444 1.00 46.31 C
ATOM 12 O2' U A1081 29.610 103.156 126.279 1.00 48.93 O
ATOM 13 C1' U A1081 31.323 103.551 127.929 1.00 46.23 C
ATOM 14 N1 U A1081 32.184 104.695 128.256 1.00 44.05 N
ATOM 15 C2 U A1081 31.555 105.901 128.477 1.00 43.84 C
ATOM 16 O2 U A1081 30.346 106.014 128.495 1.00 44.92 O
ATOM 17 N3 U A1081 32.392 106.968 128.674 1.00 44.32 N
ATOM 18 C4 U A1081 33.770 106.950 128.680 1.00 43.60 C
ATOM 19 O4 U A1081 34.387 108.005 128.834 1.00 43.00 O
ATOM 20 C5 U A1081 34.350 105.654 128.495 1.00 42.81 C
ATOM 21 C6 U A1081 33.556 104.595 128.299 1.00 44.09 C
ATOM 22 P A A1082 32.149 102.718 123.272 1.00 50.59 P
ATOM 23 OP1 A A1082 32.000 104.201 123.316 1.00 46.57 O
ATOM 24 OP2 A A1082 31.529 101.944 122.161 1.00 52.73 O
ATOM 25 O5' A A1082 33.703 102.384 123.322 1.00 50.78 O
TER
ATOM 1 O3' U B1081 31.567 102.070 124.623 1.00 49.94 O
ATOM 2 P A B1082 32.149 102.718 123.272 1.00 50.59 P
ATOM 3 OP1 A B1082 32.000 104.201 123.316 1.00 46.57 O
ATOM 4 OP2 A B1082 31.529 101.944 122.161 1.00 52.73 O
ATOM 5 O5' A B1082 33.703 102.384 123.322 1.00 50.78 O
ATOM 6 C5' A B1082 34.164 101.025 123.375 1.00 54.09 C
ATOM 7 C4' A B1082 35.031 100.733 122.178 1.00 57.38 C
ATOM 8 O4' A B1082 36.058 101.753 122.069 1.00 59.96 O
ATOM 9 C3' A B1082 35.761 99.397 122.178 1.00 59.16 C
ATOM 10 O3' A B1082 35.898 98.982 120.822 1.00 62.25 O
ATOM 11 C2' A B1082 37.126 99.777 122.750 1.00 59.26 C
ATOM 12 O2' A B1082 38.155 98.890 122.361 1.00 60.68 O
ATOM 13 C1' A B1082 37.337 101.156 122.123 1.00 58.97 C
ATOM 14 N9 A B1082 38.219 102.082 122.839 1.00 58.47 N
ATOM 15 C8 A B1082 38.699 102.021 124.127 1.00 58.73 C
ATOM 16 N7 A B1082 39.442 103.050 124.464 1.00 58.11 N
ATOM 17 C5 A B1082 39.461 103.837 123.319 1.00 58.57 C
ATOM 18 C6 A B1082 40.074 105.072 123.023 1.00 57.98 C
ATOM 19 N6 A B1082 40.804 105.768 123.898 1.00 58.45 N
ATOM 20 N1 A B1082 39.904 105.576 121.782 1.00 57.19 N
ATOM 21 C2 A B1082 39.159 104.889 120.909 1.00 57.43 C
ATOM 22 N3 A B1082 38.525 103.730 121.069 1.00 58.66 N
ATOM 23 C4 A B1082 38.720 103.248 122.309 1.00 58.47 C
ATOM 24 P A B1083 34.645 98.327 120.044 1.00 63.55 P
ATOM 25 OP1 A B1083 34.846 98.672 118.611 1.00 64.60 O
ATOM 26 OP2 A B1083 33.363 98.687 120.712 1.00 64.71 O
ATOM 27 O5' A B1083 34.863 96.763 120.223 1.00 60.03 O
TER
ATOM 2 P U A1081 35.852 100.699 126.963 1.00 47.05 P
ATOM 3 OP1 U A1081 35.794 99.580 125.987 1.00 44.79 O
ATOM 4 OP2 U A1081 36.879 101.763 126.810 1.00 44.79 O
ATOM 5 O5' U A1081 34.427 101.409 126.983 1.00 45.40 O
ATOM 6 C5' U A1081 33.222 100.632 126.938 1.00 45.73 C
ATOM 7 C4' U A1081 32.016 101.536 126.956 1.00 46.72 C
ATOM 8 O4' U A1081 32.026 102.339 128.166 1.00 48.58 O
ATOM 9 C3' U A1081 31.969 102.595 125.876 1.00 47.47 C
ATOM 10 O3' U A1081 31.567 102.070 124.623 1.00 49.94 O
ATOM 11 C2' U A1081 30.951 103.572 126.444 1.00 46.31 C
ATOM 12 O2' U A1081 29.610 103.156 126.279 1.00 48.93 O
ATOM 13 C1' U A1081 31.323 103.551 127.929 1.00 46.23 C
ATOM 14 N1 U A1081 32.184 104.695 128.256 1.00 44.05 N
ATOM 15 C2 U A1081 31.555 105.901 128.477 1.00 43.84 C
ATOM 16 O2 U A1081 30.346 106.014 128.495 1.00 44.92 O
ATOM 17 N3 U A1081 32.392 106.968 128.674 1.00 44.32 N
ATOM 18 C4 U A1081 33.770 106.950 128.680 1.00 43.60 C
ATOM 19 O4 U A1081 34.387 108.005 128.834 1.00 43.00 O
ATOM 20 C5 U A1081 34.350 105.654 128.495 1.00 42.81 C
ATOM 21 C6 U A1081 33.556 104.595 128.299 1.00 44.09 C
ATOM 22 P A A1082 32.149 102.718 123.272 1.00 50.59 P
ATOM 23 OP1 A A1082 32.000 104.201 123.316 1.00 46.57 O
ATOM 24 OP2 A A1082 31.529 101.944 122.161 1.00 52.73 O
ATOM 25 O5' A A1082 33.703 102.384 123.322 1.00 50.78 O
TER
ATOM 1 O3' U B1081 31.567 102.070 124.623 1.00 49.94 O
ATOM 2 P A B1082 32.149 102.718 123.272 1.00 50.59 P
ATOM 3 OP1 A B1082 32.000 104.201 123.316 1.00 46.57 O
ATOM 4 OP2 A B1082 31.529 101.944 122.161 1.00 52.73 O
ATOM 5 O5' A B1082 33.703 102.384 123.322 1.00 50.78 O
ATOM 6 C5' A B1082 34.164 101.025 123.375 1.00 54.09 C
ATOM 7 C4' A B1082 35.031 100.733 122.178 1.00 57.38 C
ATOM 8 O4' A B1082 36.058 101.753 122.069 1.00 59.96 O
ATOM 9 C3' A B1082 35.761 99.397 122.178 1.00 59.16 C
ATOM 10 O3' A B1082 35.898 98.982 120.822 1.00 62.25 O
ATOM 11 C2' A B1082 37.126 99.777 122.750 1.00 59.26 C
ATOM 12 O2' A B1082 38.155 98.890 122.361 1.00 60.68 O
ATOM 13 C1' A B1082 37.337 101.156 122.123 1.00 58.97 C
ATOM 14 N9 A B1082 38.219 102.082 122.839 1.00 58.47 N
ATOM 15 C8 A B1082 38.699 102.021 124.127 1.00 58.73 C
ATOM 16 N7 A B1082 39.442 103.050 124.464 1.00 58.11 N
ATOM 17 C5 A B1082 39.461 103.837 123.319 1.00 58.57 C
ATOM 18 C6 A B1082 40.074 105.072 123.023 1.00 57.98 C
ATOM 19 N6 A B1082 40.804 105.768 123.898 1.00 58.45 N
ATOM 20 N1 A B1082 39.904 105.576 121.782 1.00 57.19 N
ATOM 21 C2 A B1082 39.159 104.889 120.909 1.00 57.43 C
ATOM 22 N3 A B1082 38.525 103.730 121.069 1.00 58.66 N
ATOM 23 C4 A B1082 38.720 103.248 122.309 1.00 58.47 C
ATOM 24 P A B1083 34.645 98.327 120.044 1.00 63.55 P
ATOM 25 OP1 A B1083 34.846 98.672 118.611 1.00 64.60 O
ATOM 26 OP2 A B1083 33.363 98.687 120.712 1.00 64.71 O
ATOM 27 O5' A B1083 34.863 96.763 120.223 1.00 60.03 O
TER
Atoms:
C4: (33.770,106.950,128.680)
N3: (32.392,106.968,128.674)
OP1: (35.794,99.580,125.987)
OP2: (36.879,101.763,126.810)
C2: (31.555,105.901,128.477)
C1': (31.323,103.551,127.929)
C3': (31.969,102.595,125.876)
O5': (34.427,101.409,126.983)
O4': (32.026,102.339,128.166)
C5': (33.222,100.632,126.938)
P: (35.852,100.699,126.963)
C4': (32.016,101.536,126.956)
C2': (30.951,103.572,126.444)
O2': (29.610,103.156,126.279)
N1: (32.184,104.695,128.256)
O4: (34.387,108.005,128.834)
O2: (30.346,106.014,128.495)
C6: (33.556,104.595,128.299)
C5: (34.350,105.654,128.495)
O3': (31.567,102.070,124.623)
N3: (32.392,106.968,128.674)
OP1: (35.794,99.580,125.987)
OP2: (36.879,101.763,126.810)
C2: (31.555,105.901,128.477)
C1': (31.323,103.551,127.929)
C3': (31.969,102.595,125.876)
O5': (34.427,101.409,126.983)
O4': (32.026,102.339,128.166)
C5': (33.222,100.632,126.938)
P: (35.852,100.699,126.963)
C4': (32.016,101.536,126.956)
C2': (30.951,103.572,126.444)
O2': (29.610,103.156,126.279)
N1: (32.184,104.695,128.256)
O4: (34.387,108.005,128.834)
O2: (30.346,106.014,128.495)
C6: (33.556,104.595,128.299)
C5: (34.350,105.654,128.495)
O3': (31.567,102.070,124.623)
OP1: (32.000,104.201,123.316)
OP2: (31.529,101.944,122.161)
C3': (35.761,99.397,122.178)
C1': (37.337,101.156,122.123)
C5': (34.164,101.025,123.375)
O4': (36.058,101.753,122.069)
C8: (38.699,102.021,124.127)
O2': (38.155,98.890,122.361)
C6: (40.074,105.072,123.023)
C5: (39.461,103.837,123.319)
C4: (38.720,103.248,122.309)
P: (32.149,102.718,123.272)
C4': (35.031,100.733,122.178)
C2': (37.126,99.777,122.750)
C2: (39.159,104.889,120.909)
N1: (39.904,105.576,121.782)
N3: (38.525,103.730,121.069)
N6: (40.804,105.768,123.898)
N7: (39.442,103.050,124.464)
N9: (38.219,102.082,122.839)
O5': (33.703,102.384,123.322)
O3': (35.898,98.982,120.822)
OP2: (31.529,101.944,122.161)
C3': (35.761,99.397,122.178)
C1': (37.337,101.156,122.123)
C5': (34.164,101.025,123.375)
O4': (36.058,101.753,122.069)
C8: (38.699,102.021,124.127)
O2': (38.155,98.890,122.361)
C6: (40.074,105.072,123.023)
C5: (39.461,103.837,123.319)
C4: (38.720,103.248,122.309)
P: (32.149,102.718,123.272)
C4': (35.031,100.733,122.178)
C2': (37.126,99.777,122.750)
C2: (39.159,104.889,120.909)
N1: (39.904,105.576,121.782)
N3: (38.525,103.730,121.069)
N6: (40.804,105.768,123.898)
N7: (39.442,103.050,124.464)
N9: (38.219,102.082,122.839)
O5': (33.703,102.384,123.322)
O3': (35.898,98.982,120.822)
Image (generated by PyMOL):