ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01081:01082

Extra

PDB:
ATOM 1 O3' G A1080 35.908 101.064 128.354 1.00 40.85 O
ATOM 2 P U A1081 35.796 101.738 126.898 1.00 41.32 P
ATOM 3 OP1 U A1081 35.753 100.636 125.901 1.00 42.68 O
ATOM 4 OP2 U A1081 36.822 102.794 126.780 1.00 38.67 O
ATOM 5 O5' U A1081 34.369 102.437 126.904 1.00 41.41 O
ATOM 6 C5' U A1081 33.174 101.647 126.835 1.00 39.24 C
ATOM 7 C4' U A1081 31.964 102.538 126.776 1.00 40.69 C
ATOM 8 O4' U A1081 31.889 103.335 127.988 1.00 41.40 O
ATOM 9 C3' U A1081 31.949 103.598 125.691 1.00 41.54 C
ATOM 10 O3' U A1081 31.615 103.082 124.408 1.00 43.75 O
ATOM 11 C2' U A1081 30.880 104.540 126.217 1.00 40.85 C
ATOM 12 O2' U A1081 29.572 104.031 126.032 1.00 43.33 O
ATOM 13 C1' U A1081 31.211 104.547 127.710 1.00 39.63 C
ATOM 14 N1 U A1081 32.073 105.686 128.061 1.00 39.60 N
ATOM 15 C2 U A1081 31.445 106.887 128.353 1.00 39.45 C
ATOM 16 O2 U A1081 30.240 107.008 128.385 1.00 41.89 O
ATOM 17 N3 U A1081 32.284 107.941 128.601 1.00 38.36 N
ATOM 18 C4 U A1081 33.655 107.924 128.593 1.00 37.64 C
ATOM 19 O4 U A1081 34.266 108.973 128.776 1.00 38.40 O
ATOM 20 C5 U A1081 34.236 106.646 128.316 1.00 38.28 C
ATOM 21 C6 U A1081 33.445 105.593 128.071 1.00 39.17 C
ATOM 22 P A A1082 32.222 103.778 123.091 1.00 45.44 P
ATOM 23 OP1 A A1082 32.089 105.259 123.217 1.00 42.32 O
ATOM 24 OP2 A A1082 31.637 103.072 121.916 1.00 43.16 O
ATOM 25 O5' A A1082 33.776 103.442 123.146 1.00 45.29 O
TER

ATOM 1 O3' U B1081 31.615 103.082 124.408 1.00 43.75 O
ATOM 2 P A B1082 32.222 103.778 123.091 1.00 45.44 P
ATOM 3 OP1 A B1082 32.089 105.259 123.217 1.00 42.32 O
ATOM 4 OP2 A B1082 31.637 103.072 121.916 1.00 43.16 O
ATOM 5 O5' A B1082 33.776 103.442 123.146 1.00 45.29 O
ATOM 6 C5' A B1082 34.242 102.085 123.146 1.00 44.38 C
ATOM 7 C4' A B1082 35.269 101.900 122.061 1.00 46.28 C
ATOM 8 O4' A B1082 36.306 102.914 122.180 1.00 46.26 O
ATOM 9 C3' A B1082 35.990 100.557 122.060 1.00 47.05 C
ATOM 10 O3' A B1082 36.309 100.230 120.710 1.00 48.83 O
ATOM 11 C2' A B1082 37.270 100.880 122.824 1.00 46.03 C
ATOM 12 O2' A B1082 38.326 100.006 122.506 1.00 47.38 O
ATOM 13 C1' A B1082 37.567 102.287 122.308 1.00 45.45 C
ATOM 14 N9 A B1082 38.416 103.130 123.152 1.00 45.88 N
ATOM 15 C8 A B1082 38.817 102.946 124.453 1.00 45.36 C
ATOM 16 N7 A B1082 39.566 103.918 124.918 1.00 45.45 N
ATOM 17 C5 A B1082 39.670 104.799 123.851 1.00 44.10 C
ATOM 18 C6 A B1082 40.320 106.038 123.702 1.00 45.22 C
ATOM 19 N6 A B1082 41.011 106.638 124.676 1.00 44.60 N
ATOM 20 N1 A B1082 40.228 106.655 122.505 1.00 43.60 N
ATOM 21 C2 A B1082 39.521 106.067 121.537 1.00 42.72 C
ATOM 22 N3 A B1082 38.860 104.917 121.557 1.00 43.07 N
ATOM 23 C4 A B1082 38.975 104.324 122.756 1.00 44.72 C
ATOM 24 P A B1083 35.217 99.501 119.781 1.00 50.57 P
ATOM 25 OP1 A B1083 35.666 99.703 118.381 1.00 49.13 O
ATOM 26 OP2 A B1083 33.845 99.925 120.184 1.00 53.01 O
ATOM 27 O5' A B1083 35.353 97.964 120.161 1.00 47.47 O
TER

Atoms:
C4: (33.655,107.924,128.593)
N3: (32.284,107.941,128.601)
OP1: (35.753,100.636,125.901)
OP2: (36.822,102.794,126.780)
C2: (31.445,106.887,128.353)
C1': (31.211,104.547,127.710)
C3': (31.949,103.598,125.691)
O5': (34.369,102.437,126.904)
O4': (31.889,103.335,127.988)
C5': (33.174,101.647,126.835)
P: (35.796,101.738,126.898)
C4': (31.964,102.538,126.776)
C2': (30.880,104.540,126.217)
O2': (29.572,104.031,126.032)
N1: (32.073,105.686,128.061)
O4: (34.266,108.973,128.776)
O2: (30.240,107.008,128.385)
C6: (33.445,105.593,128.071)
C5: (34.236,106.646,128.316)
O3': (31.615,103.082,124.408)
OP1: (32.089,105.259,123.217)
OP2: (31.637,103.072,121.916)
C3': (35.990,100.557,122.060)
C1': (37.567,102.287,122.308)
C5': (34.242,102.085,123.146)
O4': (36.306,102.914,122.180)
C8: (38.817,102.946,124.453)
O2': (38.326,100.006,122.506)
C6: (40.320,106.038,123.702)
C5: (39.670,104.799,123.851)
C4: (38.975,104.324,122.756)
P: (32.222,103.778,123.091)
C4': (35.269,101.900,122.061)
C2': (37.270,100.880,122.824)
C2: (39.521,106.067,121.537)
N1: (40.228,106.655,122.505)
N3: (38.860,104.917,121.557)
N6: (41.011,106.638,124.676)
N7: (39.566,103.918,124.918)
N9: (38.416,103.130,123.152)
O5': (33.776,103.442,123.146)
O3': (36.309,100.230,120.710)
Image (generated by PyMOL):
PyMOL image
show in jmol