Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01081:01082
Extra
PDB:
ATOM 1 O3' G A1080 35.998 101.153 128.237 1.00 35.00 O
ATOM 2 P U A1081 35.835 101.846 126.795 1.00 37.38 P
ATOM 3 OP1 U A1081 35.743 100.768 125.776 1.00 38.14 O
ATOM 4 OP2 U A1081 36.848 102.920 126.646 1.00 34.77 O
ATOM 5 O5' U A1081 34.412 102.544 126.882 1.00 36.98 O
ATOM 6 C5' U A1081 33.216 101.762 126.815 1.00 34.17 C
ATOM 7 C4' U A1081 32.023 102.666 126.748 1.00 34.54 C
ATOM 8 O4' U A1081 31.998 103.493 127.938 1.00 36.39 O
ATOM 9 C3' U A1081 32.027 103.709 125.649 1.00 35.39 C
ATOM 10 O3' U A1081 31.691 103.174 124.375 1.00 38.67 O
ATOM 11 C2' U A1081 30.970 104.667 126.166 1.00 34.62 C
ATOM 12 O2' U A1081 29.670 104.126 126.044 1.00 37.08 O
ATOM 13 C1' U A1081 31.320 104.703 127.652 1.00 35.01 C
ATOM 14 N1 U A1081 32.179 105.847 127.995 1.00 35.06 N
ATOM 15 C2 U A1081 31.548 107.041 128.284 1.00 35.81 C
ATOM 16 O2 U A1081 30.341 107.163 128.298 1.00 39.14 O
ATOM 17 N3 U A1081 32.381 108.093 128.555 1.00 36.59 N
ATOM 18 C4 U A1081 33.749 108.080 128.569 1.00 36.83 C
ATOM 19 O4 U A1081 34.355 109.119 128.825 1.00 37.94 O
ATOM 20 C5 U A1081 34.338 106.808 128.276 1.00 36.70 C
ATOM 21 C6 U A1081 33.550 105.757 128.010 1.00 35.92 C
ATOM 22 P A A1082 32.310 103.838 123.045 1.00 39.51 P
ATOM 23 OP1 A A1082 32.140 105.317 123.124 1.00 35.84 O
ATOM 24 OP2 A A1082 31.766 103.083 121.883 1.00 37.63 O
ATOM 25 O5' A A1082 33.865 103.518 123.124 1.00 40.59 O
TER
ATOM 1 O3' U B1081 31.691 103.174 124.375 1.00 38.67 O
ATOM 2 P A B1082 32.310 103.838 123.045 1.00 39.51 P
ATOM 3 OP1 A B1082 32.140 105.317 123.124 1.00 35.84 O
ATOM 4 OP2 A B1082 31.766 103.083 121.883 1.00 37.63 O
ATOM 5 O5' A B1082 33.865 103.518 123.124 1.00 40.59 O
ATOM 6 C5' A B1082 34.335 102.162 123.119 1.00 41.88 C
ATOM 7 C4' A B1082 35.340 101.968 122.013 1.00 43.79 C
ATOM 8 O4' A B1082 36.392 102.966 122.117 1.00 44.33 O
ATOM 9 C3' A B1082 36.044 100.619 122.011 1.00 45.47 C
ATOM 10 O3' A B1082 36.349 100.291 120.658 1.00 48.38 O
ATOM 11 C2' A B1082 37.328 100.928 122.777 1.00 43.99 C
ATOM 12 O2' A B1082 38.375 100.033 122.487 1.00 44.26 O
ATOM 13 C1' A B1082 37.646 102.323 122.245 1.00 43.57 C
ATOM 14 N9 A B1082 38.507 103.167 123.075 1.00 43.03 N
ATOM 15 C8 A B1082 38.914 102.991 124.374 1.00 43.55 C
ATOM 16 N7 A B1082 39.642 103.980 124.837 1.00 43.91 N
ATOM 17 C5 A B1082 39.730 104.859 123.767 1.00 42.77 C
ATOM 18 C6 A B1082 40.348 106.114 123.621 1.00 43.17 C
ATOM 19 N6 A B1082 41.010 106.733 124.599 1.00 42.87 N
ATOM 20 N1 A B1082 40.253 106.723 122.421 1.00 42.09 N
ATOM 21 C2 A B1082 39.573 106.109 121.445 1.00 41.40 C
ATOM 22 N3 A B1082 38.941 104.942 121.463 1.00 40.47 N
ATOM 23 C4 A B1082 39.056 104.361 122.669 1.00 42.39 C
ATOM 24 P A B1083 35.254 99.543 119.750 1.00 50.12 P
ATOM 25 OP1 A B1083 35.702 99.699 118.342 1.00 49.49 O
ATOM 26 OP2 A B1083 33.892 99.998 120.145 1.00 52.94 O
ATOM 27 O5' A B1083 35.379 98.018 120.172 1.00 46.40 O
TER
ATOM 2 P U A1081 35.835 101.846 126.795 1.00 37.38 P
ATOM 3 OP1 U A1081 35.743 100.768 125.776 1.00 38.14 O
ATOM 4 OP2 U A1081 36.848 102.920 126.646 1.00 34.77 O
ATOM 5 O5' U A1081 34.412 102.544 126.882 1.00 36.98 O
ATOM 6 C5' U A1081 33.216 101.762 126.815 1.00 34.17 C
ATOM 7 C4' U A1081 32.023 102.666 126.748 1.00 34.54 C
ATOM 8 O4' U A1081 31.998 103.493 127.938 1.00 36.39 O
ATOM 9 C3' U A1081 32.027 103.709 125.649 1.00 35.39 C
ATOM 10 O3' U A1081 31.691 103.174 124.375 1.00 38.67 O
ATOM 11 C2' U A1081 30.970 104.667 126.166 1.00 34.62 C
ATOM 12 O2' U A1081 29.670 104.126 126.044 1.00 37.08 O
ATOM 13 C1' U A1081 31.320 104.703 127.652 1.00 35.01 C
ATOM 14 N1 U A1081 32.179 105.847 127.995 1.00 35.06 N
ATOM 15 C2 U A1081 31.548 107.041 128.284 1.00 35.81 C
ATOM 16 O2 U A1081 30.341 107.163 128.298 1.00 39.14 O
ATOM 17 N3 U A1081 32.381 108.093 128.555 1.00 36.59 N
ATOM 18 C4 U A1081 33.749 108.080 128.569 1.00 36.83 C
ATOM 19 O4 U A1081 34.355 109.119 128.825 1.00 37.94 O
ATOM 20 C5 U A1081 34.338 106.808 128.276 1.00 36.70 C
ATOM 21 C6 U A1081 33.550 105.757 128.010 1.00 35.92 C
ATOM 22 P A A1082 32.310 103.838 123.045 1.00 39.51 P
ATOM 23 OP1 A A1082 32.140 105.317 123.124 1.00 35.84 O
ATOM 24 OP2 A A1082 31.766 103.083 121.883 1.00 37.63 O
ATOM 25 O5' A A1082 33.865 103.518 123.124 1.00 40.59 O
TER
ATOM 1 O3' U B1081 31.691 103.174 124.375 1.00 38.67 O
ATOM 2 P A B1082 32.310 103.838 123.045 1.00 39.51 P
ATOM 3 OP1 A B1082 32.140 105.317 123.124 1.00 35.84 O
ATOM 4 OP2 A B1082 31.766 103.083 121.883 1.00 37.63 O
ATOM 5 O5' A B1082 33.865 103.518 123.124 1.00 40.59 O
ATOM 6 C5' A B1082 34.335 102.162 123.119 1.00 41.88 C
ATOM 7 C4' A B1082 35.340 101.968 122.013 1.00 43.79 C
ATOM 8 O4' A B1082 36.392 102.966 122.117 1.00 44.33 O
ATOM 9 C3' A B1082 36.044 100.619 122.011 1.00 45.47 C
ATOM 10 O3' A B1082 36.349 100.291 120.658 1.00 48.38 O
ATOM 11 C2' A B1082 37.328 100.928 122.777 1.00 43.99 C
ATOM 12 O2' A B1082 38.375 100.033 122.487 1.00 44.26 O
ATOM 13 C1' A B1082 37.646 102.323 122.245 1.00 43.57 C
ATOM 14 N9 A B1082 38.507 103.167 123.075 1.00 43.03 N
ATOM 15 C8 A B1082 38.914 102.991 124.374 1.00 43.55 C
ATOM 16 N7 A B1082 39.642 103.980 124.837 1.00 43.91 N
ATOM 17 C5 A B1082 39.730 104.859 123.767 1.00 42.77 C
ATOM 18 C6 A B1082 40.348 106.114 123.621 1.00 43.17 C
ATOM 19 N6 A B1082 41.010 106.733 124.599 1.00 42.87 N
ATOM 20 N1 A B1082 40.253 106.723 122.421 1.00 42.09 N
ATOM 21 C2 A B1082 39.573 106.109 121.445 1.00 41.40 C
ATOM 22 N3 A B1082 38.941 104.942 121.463 1.00 40.47 N
ATOM 23 C4 A B1082 39.056 104.361 122.669 1.00 42.39 C
ATOM 24 P A B1083 35.254 99.543 119.750 1.00 50.12 P
ATOM 25 OP1 A B1083 35.702 99.699 118.342 1.00 49.49 O
ATOM 26 OP2 A B1083 33.892 99.998 120.145 1.00 52.94 O
ATOM 27 O5' A B1083 35.379 98.018 120.172 1.00 46.40 O
TER
Atoms:
C4: (33.749,108.080,128.569)
N3: (32.381,108.093,128.555)
OP1: (35.743,100.768,125.776)
OP2: (36.848,102.920,126.646)
C2: (31.548,107.041,128.284)
C1': (31.320,104.703,127.652)
C3': (32.027,103.709,125.649)
O5': (34.412,102.544,126.882)
O4': (31.998,103.493,127.938)
C5': (33.216,101.762,126.815)
P: (35.835,101.846,126.795)
C4': (32.023,102.666,126.748)
C2': (30.970,104.667,126.166)
O2': (29.670,104.126,126.044)
N1: (32.179,105.847,127.995)
O4: (34.355,109.119,128.825)
O2: (30.341,107.163,128.298)
C6: (33.550,105.757,128.010)
C5: (34.338,106.808,128.276)
O3': (31.691,103.174,124.375)
N3: (32.381,108.093,128.555)
OP1: (35.743,100.768,125.776)
OP2: (36.848,102.920,126.646)
C2: (31.548,107.041,128.284)
C1': (31.320,104.703,127.652)
C3': (32.027,103.709,125.649)
O5': (34.412,102.544,126.882)
O4': (31.998,103.493,127.938)
C5': (33.216,101.762,126.815)
P: (35.835,101.846,126.795)
C4': (32.023,102.666,126.748)
C2': (30.970,104.667,126.166)
O2': (29.670,104.126,126.044)
N1: (32.179,105.847,127.995)
O4: (34.355,109.119,128.825)
O2: (30.341,107.163,128.298)
C6: (33.550,105.757,128.010)
C5: (34.338,106.808,128.276)
O3': (31.691,103.174,124.375)
OP1: (32.140,105.317,123.124)
OP2: (31.766,103.083,121.883)
C3': (36.044,100.619,122.011)
C1': (37.646,102.323,122.245)
C5': (34.335,102.162,123.119)
O4': (36.392,102.966,122.117)
C8: (38.914,102.991,124.374)
O2': (38.375,100.033,122.487)
C6: (40.348,106.114,123.621)
C5: (39.730,104.859,123.767)
C4: (39.056,104.361,122.669)
P: (32.310,103.838,123.045)
C4': (35.340,101.968,122.013)
C2': (37.328,100.928,122.777)
C2: (39.573,106.109,121.445)
N1: (40.253,106.723,122.421)
N3: (38.941,104.942,121.463)
N6: (41.010,106.733,124.599)
N7: (39.642,103.980,124.837)
N9: (38.507,103.167,123.075)
O5': (33.865,103.518,123.124)
O3': (36.349,100.291,120.658)
OP2: (31.766,103.083,121.883)
C3': (36.044,100.619,122.011)
C1': (37.646,102.323,122.245)
C5': (34.335,102.162,123.119)
O4': (36.392,102.966,122.117)
C8: (38.914,102.991,124.374)
O2': (38.375,100.033,122.487)
C6: (40.348,106.114,123.621)
C5: (39.730,104.859,123.767)
C4: (39.056,104.361,122.669)
P: (32.310,103.838,123.045)
C4': (35.340,101.968,122.013)
C2': (37.328,100.928,122.777)
C2: (39.573,106.109,121.445)
N1: (40.253,106.723,122.421)
N3: (38.941,104.942,121.463)
N6: (41.010,106.733,124.599)
N7: (39.642,103.980,124.837)
N9: (38.507,103.167,123.075)
O5': (33.865,103.518,123.124)
O3': (36.349,100.291,120.658)
Image (generated by PyMOL):