ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01081:01082

Extra

PDB:
ATOM 1 O3' G A1080 35.793 101.045 128.312 1.00 33.42 O
ATOM 2 P U A1081 35.653 101.713 126.856 1.00 34.70 P
ATOM 3 OP1 U A1081 35.558 100.596 125.883 1.00 35.09 O
ATOM 4 OP2 U A1081 36.698 102.759 126.685 1.00 32.72 O
ATOM 5 O5' U A1081 34.239 102.437 126.899 1.00 33.93 O
ATOM 6 C5' U A1081 33.036 101.672 126.783 1.00 32.65 C
ATOM 7 C4' U A1081 31.846 102.582 126.737 1.00 32.07 C
ATOM 8 O4' U A1081 31.812 103.371 127.949 1.00 32.66 O
ATOM 9 C3' U A1081 31.836 103.651 125.661 1.00 33.26 C
ATOM 10 O3' U A1081 31.467 103.154 124.380 1.00 37.20 O
ATOM 11 C2' U A1081 30.776 104.587 126.209 1.00 33.04 C
ATOM 12 O2' U A1081 29.480 104.050 126.046 1.00 35.45 O
ATOM 13 C1' U A1081 31.130 104.586 127.696 1.00 32.08 C
ATOM 14 N1 U A1081 32.006 105.717 128.036 1.00 32.23 N
ATOM 15 C2 U A1081 31.395 106.944 128.276 1.00 32.40 C
ATOM 16 O2 U A1081 30.186 107.095 128.272 1.00 32.40 O
ATOM 17 N3 U A1081 32.254 107.984 128.521 1.00 32.50 N
ATOM 18 C4 U A1081 33.629 107.932 128.562 1.00 34.10 C
ATOM 19 O4 U A1081 34.265 108.970 128.750 1.00 35.55 O
ATOM 20 C5 U A1081 34.188 106.627 128.337 1.00 33.82 C
ATOM 21 C6 U A1081 33.377 105.589 128.090 1.00 32.57 C
ATOM 22 P A A1082 32.124 103.795 123.053 1.00 38.69 P
ATOM 23 OP1 A A1082 31.992 105.281 123.105 1.00 35.27 O
ATOM 24 OP2 A A1082 31.576 103.039 121.887 1.00 36.13 O
ATOM 25 O5' A A1082 33.666 103.435 123.180 1.00 38.71 O
TER

ATOM 1 O3' U B1081 31.467 103.154 124.380 1.00 37.20 O
ATOM 2 P A B1082 32.124 103.795 123.053 1.00 38.69 P
ATOM 3 OP1 A B1082 31.992 105.281 123.105 1.00 35.27 O
ATOM 4 OP2 A B1082 31.576 103.039 121.887 1.00 36.13 O
ATOM 5 O5' A B1082 33.666 103.435 123.180 1.00 38.71 O
ATOM 6 C5' A B1082 34.106 102.067 123.170 1.00 39.93 C
ATOM 7 C4' A B1082 35.102 101.872 122.063 1.00 41.60 C
ATOM 8 O4' A B1082 36.133 102.886 122.168 1.00 43.05 O
ATOM 9 C3' A B1082 35.826 100.535 122.006 1.00 42.13 C
ATOM 10 O3' A B1082 36.099 100.275 120.633 1.00 44.24 O
ATOM 11 C2' A B1082 37.136 100.844 122.725 1.00 41.03 C
ATOM 12 O2' A B1082 38.189 100.004 122.307 1.00 41.67 O
ATOM 13 C1' A B1082 37.400 102.267 122.242 1.00 41.92 C
ATOM 14 N9 A B1082 38.260 103.112 123.071 1.00 40.89 N
ATOM 15 C8 A B1082 38.632 102.968 124.383 1.00 41.01 C
ATOM 16 N7 A B1082 39.367 103.956 124.834 1.00 41.67 N
ATOM 17 C5 A B1082 39.496 104.800 123.740 1.00 40.72 C
ATOM 18 C6 A B1082 40.139 106.041 123.569 1.00 41.30 C
ATOM 19 N6 A B1082 40.789 106.682 124.545 1.00 40.38 N
ATOM 20 N1 A B1082 40.079 106.614 122.347 1.00 40.84 N
ATOM 21 C2 A B1082 39.409 105.982 121.376 1.00 40.16 C
ATOM 22 N3 A B1082 38.757 104.828 121.419 1.00 38.79 N
ATOM 23 C4 A B1082 38.838 104.282 122.644 1.00 40.14 C
ATOM 24 P A B1083 35.022 99.488 119.734 1.00 46.29 P
ATOM 25 OP1 A B1083 35.475 99.645 118.328 1.00 47.65 O
ATOM 26 OP2 A B1083 33.638 99.884 120.104 1.00 48.75 O
ATOM 27 O5' A B1083 35.214 97.972 120.159 1.00 42.70 O
TER

Atoms:
C4: (33.629,107.932,128.562)
N3: (32.254,107.984,128.521)
OP1: (35.558,100.596,125.883)
OP2: (36.698,102.759,126.685)
C2: (31.395,106.944,128.276)
C1': (31.130,104.586,127.696)
C3': (31.836,103.651,125.661)
O5': (34.239,102.437,126.899)
O4': (31.812,103.371,127.949)
C5': (33.036,101.672,126.783)
P: (35.653,101.713,126.856)
C4': (31.846,102.582,126.737)
C2': (30.776,104.587,126.209)
O2': (29.480,104.050,126.046)
N1: (32.006,105.717,128.036)
O4: (34.265,108.970,128.750)
O2: (30.186,107.095,128.272)
C6: (33.377,105.589,128.090)
C5: (34.188,106.627,128.337)
O3': (31.467,103.154,124.380)
OP1: (31.992,105.281,123.105)
OP2: (31.576,103.039,121.887)
C3': (35.826,100.535,122.006)
C1': (37.400,102.267,122.242)
C5': (34.106,102.067,123.170)
O4': (36.133,102.886,122.168)
C8: (38.632,102.968,124.383)
O2': (38.189,100.004,122.307)
C6: (40.139,106.041,123.569)
C5: (39.496,104.800,123.740)
C4: (38.838,104.282,122.644)
P: (32.124,103.795,123.053)
C4': (35.102,101.872,122.063)
C2': (37.136,100.844,122.725)
C2: (39.409,105.982,121.376)
N1: (40.079,106.614,122.347)
N3: (38.757,104.828,121.419)
N6: (40.789,106.682,124.545)
N7: (39.367,103.956,124.834)
N9: (38.260,103.112,123.071)
O5': (33.666,103.435,123.180)
O3': (36.099,100.275,120.633)
Image (generated by PyMOL):
PyMOL image
show in jmol