Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2566:A2735
Extra
PDB:
ATOM 1 O3' U A2565 68.287 173.902 113.032 1.00 49.06 O
ATOM 2 P A A2566 66.726 173.947 113.430 1.00 50.09 P
ATOM 3 OP1 A A2566 66.116 172.592 113.370 1.00 50.53 O
ATOM 4 OP2 A A2566 66.151 175.045 112.608 1.00 47.32 O
ATOM 5 O5' A A2566 66.717 174.401 114.960 1.00 48.49 O
ATOM 6 C5' A A2566 67.161 175.711 115.350 1.00 48.08 C
ATOM 7 C4' A A2566 66.018 176.504 115.957 1.00 48.81 C
ATOM 8 O4' A A2566 65.597 175.951 117.237 1.00 50.40 O
ATOM 9 C3' A A2566 66.378 177.929 116.310 1.00 48.21 C
ATOM 10 O3' A A2566 66.373 178.732 115.151 1.00 45.91 O
ATOM 11 C2' A A2566 65.283 178.304 117.287 1.00 49.85 C
ATOM 12 O2' A A2566 64.086 178.591 116.593 1.00 52.78 O
ATOM 13 C1' A A2566 65.154 177.004 118.088 1.00 50.66 C
ATOM 14 N9 A A2566 66.012 177.057 119.277 1.00 51.48 N
ATOM 15 C8 A A2566 67.305 176.627 119.416 1.00 51.82 C
ATOM 16 N7 A A2566 67.836 176.926 120.575 1.00 52.10 N
ATOM 17 C5 A A2566 66.819 177.577 121.253 1.00 52.22 C
ATOM 18 C6 A A2566 66.759 178.177 122.525 1.00 53.05 C
ATOM 19 N6 A A2566 67.802 178.268 123.355 1.00 54.33 N
ATOM 20 N1 A A2566 65.583 178.711 122.910 1.00 53.48 N
ATOM 21 C2 A A2566 64.555 178.669 122.056 1.00 52.97 C
ATOM 22 N3 A A2566 64.501 178.164 120.827 1.00 52.76 N
ATOM 23 C4 A A2566 65.680 177.628 120.482 1.00 51.80 C
ATOM 24 P C A2567 67.720 179.471 114.721 1.00 46.03 P
ATOM 25 OP1 C A2567 67.339 180.430 113.674 1.00 47.03 O
ATOM 26 OP2 C A2567 68.755 178.440 114.435 1.00 44.53 O
ATOM 27 O5' C A2567 68.088 180.277 116.044 1.00 46.44 O
TER
ATOM 1 O3' C B2734 60.617 181.248 120.607 1.00 52.98 O
ATOM 2 P A B2735 59.081 181.677 120.532 1.00 53.73 P
ATOM 3 OP1 A B2735 58.811 182.311 119.228 1.00 53.58 O
ATOM 4 OP2 A B2735 58.763 182.410 121.781 1.00 53.89 O
ATOM 5 O5' A B2735 58.317 180.286 120.593 1.00 53.98 O
ATOM 6 C5' A B2735 58.157 179.629 121.851 1.00 55.63 C
ATOM 7 C4' A B2735 57.558 178.266 121.674 1.00 56.60 C
ATOM 8 O4' A B2735 58.324 177.504 120.698 1.00 58.34 O
ATOM 9 C3' A B2735 57.592 177.428 122.953 1.00 56.41 C
ATOM 10 O3' A B2735 56.375 176.729 123.078 1.00 53.21 O
ATOM 11 C2' A B2735 58.712 176.436 122.684 1.00 57.94 C
ATOM 12 O2' A B2735 58.553 175.240 123.405 1.00 59.31 O
ATOM 13 C1' A B2735 58.492 176.198 121.203 1.00 60.46 C
ATOM 14 N9 A B2735 59.580 175.529 120.500 1.00 62.46 N
ATOM 15 C8 A B2735 59.464 174.833 119.322 1.00 64.06 C
ATOM 16 N7 A B2735 60.587 174.303 118.907 1.00 63.46 N
ATOM 17 C5 A B2735 61.507 174.679 119.873 1.00 63.09 C
ATOM 18 C6 A B2735 62.871 174.432 120.007 1.00 62.92 C
ATOM 19 N6 A B2735 63.579 173.718 119.134 1.00 60.78 N
ATOM 20 N1 A B2735 63.495 174.948 121.083 1.00 64.38 N
ATOM 21 C2 A B2735 62.779 175.662 121.962 1.00 63.94 C
ATOM 22 N3 A B2735 61.489 175.962 121.947 1.00 62.35 N
ATOM 23 C4 A B2735 60.902 175.438 120.861 1.00 62.44 C
ATOM 24 P C B2736 55.176 177.426 123.859 1.00 52.55 P
ATOM 25 OP1 C B2736 54.010 176.500 123.947 1.00 52.71 O
ATOM 26 OP2 C B2736 55.013 178.760 123.220 1.00 51.86 O
ATOM 27 O5' C B2736 55.779 177.645 125.317 1.00 52.51 O
TER
ATOM 2 P A A2566 66.726 173.947 113.430 1.00 50.09 P
ATOM 3 OP1 A A2566 66.116 172.592 113.370 1.00 50.53 O
ATOM 4 OP2 A A2566 66.151 175.045 112.608 1.00 47.32 O
ATOM 5 O5' A A2566 66.717 174.401 114.960 1.00 48.49 O
ATOM 6 C5' A A2566 67.161 175.711 115.350 1.00 48.08 C
ATOM 7 C4' A A2566 66.018 176.504 115.957 1.00 48.81 C
ATOM 8 O4' A A2566 65.597 175.951 117.237 1.00 50.40 O
ATOM 9 C3' A A2566 66.378 177.929 116.310 1.00 48.21 C
ATOM 10 O3' A A2566 66.373 178.732 115.151 1.00 45.91 O
ATOM 11 C2' A A2566 65.283 178.304 117.287 1.00 49.85 C
ATOM 12 O2' A A2566 64.086 178.591 116.593 1.00 52.78 O
ATOM 13 C1' A A2566 65.154 177.004 118.088 1.00 50.66 C
ATOM 14 N9 A A2566 66.012 177.057 119.277 1.00 51.48 N
ATOM 15 C8 A A2566 67.305 176.627 119.416 1.00 51.82 C
ATOM 16 N7 A A2566 67.836 176.926 120.575 1.00 52.10 N
ATOM 17 C5 A A2566 66.819 177.577 121.253 1.00 52.22 C
ATOM 18 C6 A A2566 66.759 178.177 122.525 1.00 53.05 C
ATOM 19 N6 A A2566 67.802 178.268 123.355 1.00 54.33 N
ATOM 20 N1 A A2566 65.583 178.711 122.910 1.00 53.48 N
ATOM 21 C2 A A2566 64.555 178.669 122.056 1.00 52.97 C
ATOM 22 N3 A A2566 64.501 178.164 120.827 1.00 52.76 N
ATOM 23 C4 A A2566 65.680 177.628 120.482 1.00 51.80 C
ATOM 24 P C A2567 67.720 179.471 114.721 1.00 46.03 P
ATOM 25 OP1 C A2567 67.339 180.430 113.674 1.00 47.03 O
ATOM 26 OP2 C A2567 68.755 178.440 114.435 1.00 44.53 O
ATOM 27 O5' C A2567 68.088 180.277 116.044 1.00 46.44 O
TER
ATOM 1 O3' C B2734 60.617 181.248 120.607 1.00 52.98 O
ATOM 2 P A B2735 59.081 181.677 120.532 1.00 53.73 P
ATOM 3 OP1 A B2735 58.811 182.311 119.228 1.00 53.58 O
ATOM 4 OP2 A B2735 58.763 182.410 121.781 1.00 53.89 O
ATOM 5 O5' A B2735 58.317 180.286 120.593 1.00 53.98 O
ATOM 6 C5' A B2735 58.157 179.629 121.851 1.00 55.63 C
ATOM 7 C4' A B2735 57.558 178.266 121.674 1.00 56.60 C
ATOM 8 O4' A B2735 58.324 177.504 120.698 1.00 58.34 O
ATOM 9 C3' A B2735 57.592 177.428 122.953 1.00 56.41 C
ATOM 10 O3' A B2735 56.375 176.729 123.078 1.00 53.21 O
ATOM 11 C2' A B2735 58.712 176.436 122.684 1.00 57.94 C
ATOM 12 O2' A B2735 58.553 175.240 123.405 1.00 59.31 O
ATOM 13 C1' A B2735 58.492 176.198 121.203 1.00 60.46 C
ATOM 14 N9 A B2735 59.580 175.529 120.500 1.00 62.46 N
ATOM 15 C8 A B2735 59.464 174.833 119.322 1.00 64.06 C
ATOM 16 N7 A B2735 60.587 174.303 118.907 1.00 63.46 N
ATOM 17 C5 A B2735 61.507 174.679 119.873 1.00 63.09 C
ATOM 18 C6 A B2735 62.871 174.432 120.007 1.00 62.92 C
ATOM 19 N6 A B2735 63.579 173.718 119.134 1.00 60.78 N
ATOM 20 N1 A B2735 63.495 174.948 121.083 1.00 64.38 N
ATOM 21 C2 A B2735 62.779 175.662 121.962 1.00 63.94 C
ATOM 22 N3 A B2735 61.489 175.962 121.947 1.00 62.35 N
ATOM 23 C4 A B2735 60.902 175.438 120.861 1.00 62.44 C
ATOM 24 P C B2736 55.176 177.426 123.859 1.00 52.55 P
ATOM 25 OP1 C B2736 54.010 176.500 123.947 1.00 52.71 O
ATOM 26 OP2 C B2736 55.013 178.760 123.220 1.00 51.86 O
ATOM 27 O5' C B2736 55.779 177.645 125.317 1.00 52.51 O
TER
Atoms:
OP1: (66.116,172.592,113.370)
OP2: (66.151,175.045,112.608)
C3': (66.378,177.929,116.310)
C1': (65.154,177.004,118.088)
C5': (67.161,175.711,115.350)
O4': (65.597,175.951,117.237)
C8: (67.305,176.627,119.416)
O2': (64.086,178.591,116.593)
C6: (66.759,178.177,122.525)
C5: (66.819,177.577,121.253)
C4: (65.680,177.628,120.482)
P: (66.726,173.947,113.430)
C4': (66.018,176.504,115.957)
C2': (65.283,178.304,117.287)
C2: (64.555,178.669,122.056)
N1: (65.583,178.711,122.910)
N3: (64.501,178.164,120.827)
N6: (67.802,178.268,123.355)
N7: (67.836,176.926,120.575)
N9: (66.012,177.057,119.277)
O5': (66.717,174.401,114.960)
O3': (66.373,178.732,115.151)
OP2: (66.151,175.045,112.608)
C3': (66.378,177.929,116.310)
C1': (65.154,177.004,118.088)
C5': (67.161,175.711,115.350)
O4': (65.597,175.951,117.237)
C8: (67.305,176.627,119.416)
O2': (64.086,178.591,116.593)
C6: (66.759,178.177,122.525)
C5: (66.819,177.577,121.253)
C4: (65.680,177.628,120.482)
P: (66.726,173.947,113.430)
C4': (66.018,176.504,115.957)
C2': (65.283,178.304,117.287)
C2: (64.555,178.669,122.056)
N1: (65.583,178.711,122.910)
N3: (64.501,178.164,120.827)
N6: (67.802,178.268,123.355)
N7: (67.836,176.926,120.575)
N9: (66.012,177.057,119.277)
O5': (66.717,174.401,114.960)
O3': (66.373,178.732,115.151)
OP1: (58.811,182.311,119.228)
OP2: (58.763,182.410,121.781)
C3': (57.592,177.428,122.953)
C1': (58.492,176.198,121.203)
C5': (58.157,179.629,121.851)
O4': (58.324,177.504,120.698)
C8: (59.464,174.833,119.322)
O2': (58.553,175.240,123.405)
C6: (62.871,174.432,120.007)
C5: (61.507,174.679,119.873)
C4: (60.902,175.438,120.861)
P: (59.081,181.677,120.532)
C4': (57.558,178.266,121.674)
C2': (58.712,176.436,122.684)
C2: (62.779,175.662,121.962)
N1: (63.495,174.948,121.083)
N3: (61.489,175.962,121.947)
N6: (63.579,173.718,119.134)
N7: (60.587,174.303,118.907)
N9: (59.580,175.529,120.500)
O5': (58.317,180.286,120.593)
O3': (56.375,176.729,123.078)
OP2: (58.763,182.410,121.781)
C3': (57.592,177.428,122.953)
C1': (58.492,176.198,121.203)
C5': (58.157,179.629,121.851)
O4': (58.324,177.504,120.698)
C8: (59.464,174.833,119.322)
O2': (58.553,175.240,123.405)
C6: (62.871,174.432,120.007)
C5: (61.507,174.679,119.873)
C4: (60.902,175.438,120.861)
P: (59.081,181.677,120.532)
C4': (57.558,178.266,121.674)
C2': (58.712,176.436,122.684)
C2: (62.779,175.662,121.962)
N1: (63.495,174.948,121.083)
N3: (61.489,175.962,121.947)
N6: (63.579,173.718,119.134)
N7: (60.587,174.303,118.907)
N9: (59.580,175.529,120.500)
O5': (58.317,180.286,120.593)
O3': (56.375,176.729,123.078)
Image (generated by PyMOL):