ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:01081:01082

Extra

PDB:
ATOM 1 O3' G A1080 35.823 100.594 128.121 1.00 42.67 O
ATOM 2 P U A1081 35.671 101.246 126.653 1.00 43.94 P
ATOM 3 OP1 U A1081 35.618 100.135 125.681 1.00 43.36 O
ATOM 4 OP2 U A1081 36.670 102.327 126.483 1.00 43.71 O
ATOM 5 O5' U A1081 34.237 101.932 126.668 1.00 44.13 O
ATOM 6 C5' U A1081 33.053 101.143 126.531 1.00 42.69 C
ATOM 7 C4' U A1081 31.842 102.033 126.484 1.00 42.86 C
ATOM 8 O4' U A1081 31.775 102.827 127.696 1.00 42.51 O
ATOM 9 C3' U A1081 31.829 103.100 125.408 1.00 43.62 C
ATOM 10 O3' U A1081 31.510 102.588 124.123 1.00 45.67 O
ATOM 11 C2' U A1081 30.748 104.030 125.932 1.00 43.09 C
ATOM 12 O2' U A1081 29.446 103.517 125.741 1.00 43.78 O
ATOM 13 C1' U A1081 31.069 104.028 127.424 1.00 43.01 C
ATOM 14 N1 U A1081 31.913 105.179 127.765 1.00 42.64 N
ATOM 15 C2 U A1081 31.269 106.368 128.021 1.00 43.66 C
ATOM 16 O2 U A1081 30.057 106.474 128.013 1.00 45.42 O
ATOM 17 N3 U A1081 32.090 107.431 128.285 1.00 43.38 N
ATOM 18 C4 U A1081 33.463 107.427 128.322 1.00 43.18 C
ATOM 19 O4 U A1081 34.062 108.479 128.552 1.00 41.78 O
ATOM 20 C5 U A1081 34.062 106.153 128.063 1.00 42.53 C
ATOM 21 C6 U A1081 33.284 105.096 127.803 1.00 42.72 C
ATOM 22 P A A1082 32.169 103.256 122.822 1.00 46.50 P
ATOM 23 OP1 A A1082 31.970 104.728 122.934 1.00 45.29 O
ATOM 24 OP2 A A1082 31.681 102.528 121.619 1.00 46.09 O
ATOM 25 O5' A A1082 33.718 102.934 122.971 1.00 47.76 O
TER

ATOM 1 O3' U B1081 31.510 102.588 124.123 1.00 45.67 O
ATOM 2 P A B1082 32.169 103.256 122.822 1.00 46.50 P
ATOM 3 OP1 A B1082 31.970 104.728 122.934 1.00 45.29 O
ATOM 4 OP2 A B1082 31.681 102.528 121.619 1.00 46.09 O
ATOM 5 O5' A B1082 33.718 102.934 122.971 1.00 47.76 O
ATOM 6 C5' A B1082 34.192 101.574 122.956 1.00 49.85 C
ATOM 7 C4' A B1082 35.194 101.390 121.842 1.00 51.50 C
ATOM 8 O4' A B1082 36.244 102.395 121.943 1.00 51.78 O
ATOM 9 C3' A B1082 35.902 100.042 121.801 1.00 51.79 C
ATOM 10 O3' A B1082 36.159 99.722 120.435 1.00 53.93 O
ATOM 11 C2' A B1082 37.212 100.347 122.520 1.00 51.21 C
ATOM 12 O2' A B1082 38.260 99.480 122.152 1.00 51.62 O
ATOM 13 C1' A B1082 37.502 101.756 122.012 1.00 51.67 C
ATOM 14 N9 A B1082 38.387 102.563 122.856 1.00 51.86 N
ATOM 15 C8 A B1082 38.851 102.293 124.122 1.00 52.12 C
ATOM 16 N7 A B1082 39.611 103.240 124.617 1.00 52.20 N
ATOM 17 C5 A B1082 39.654 104.198 123.609 1.00 51.48 C
ATOM 18 C6 A B1082 40.279 105.461 123.518 1.00 51.05 C
ATOM 19 N6 A B1082 40.997 106.012 124.500 1.00 50.50 N
ATOM 20 N1 A B1082 40.130 106.152 122.371 1.00 50.47 N
ATOM 21 C2 A B1082 39.396 105.616 121.395 1.00 50.46 C
ATOM 22 N3 A B1082 38.750 104.456 121.365 1.00 50.86 N
ATOM 23 C4 A B1082 38.919 103.786 122.516 1.00 51.30 C
ATOM 24 P A B1083 34.980 99.110 119.517 1.00 55.97 P
ATOM 25 OP1 A B1083 35.371 99.372 118.104 1.00 55.97 O
ATOM 26 OP2 A B1083 33.665 99.597 120.024 1.00 56.65 O
ATOM 27 O5' A B1083 35.027 97.541 119.783 1.00 52.94 O
TER

Atoms:
C4: (33.463,107.427,128.322)
N3: (32.090,107.431,128.285)
OP1: (35.618,100.135,125.681)
OP2: (36.670,102.327,126.483)
C2: (31.269,106.368,128.021)
C1': (31.069,104.028,127.424)
C3': (31.829,103.100,125.408)
O5': (34.237,101.932,126.668)
O4': (31.775,102.827,127.696)
C5': (33.053,101.143,126.531)
P: (35.671,101.246,126.653)
C4': (31.842,102.033,126.484)
C2': (30.748,104.030,125.932)
O2': (29.446,103.517,125.741)
N1: (31.913,105.179,127.765)
O4: (34.062,108.479,128.552)
O2: (30.057,106.474,128.013)
C6: (33.284,105.096,127.803)
C5: (34.062,106.153,128.063)
O3': (31.510,102.588,124.123)
OP1: (31.970,104.728,122.934)
OP2: (31.681,102.528,121.619)
C3': (35.902,100.042,121.801)
C1': (37.502,101.756,122.012)
C5': (34.192,101.574,122.956)
O4': (36.244,102.395,121.943)
C8: (38.851,102.293,124.122)
O2': (38.260,99.480,122.152)
C6: (40.279,105.461,123.518)
C5: (39.654,104.198,123.609)
C4: (38.919,103.786,122.516)
P: (32.169,103.256,122.822)
C4': (35.194,101.390,121.842)
C2': (37.212,100.347,122.520)
C2: (39.396,105.616,121.395)
N1: (40.130,106.152,122.371)
N3: (38.750,104.456,121.365)
N6: (40.997,106.012,124.500)
N7: (39.611,103.240,124.617)
N9: (38.387,102.563,122.856)
O5': (33.718,102.934,122.971)
O3': (36.159,99.722,120.435)
Image (generated by PyMOL):
PyMOL image
show in jmol