Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A523:A525
Extra
PDB:
ATOM 1 O3' C A 522 48.936 -98.622 -32.685 1.00 45.56 O
ATOM 2 P C A 523 50.072 -98.064 -33.666 1.00 53.40 P
ATOM 3 OP1 C A 523 51.346 -98.167 -32.901 1.00 53.53 O
ATOM 4 OP2 C A 523 49.638 -96.754 -34.233 1.00 51.12 O
ATOM 5 O5' C A 523 50.103 -99.080 -34.889 1.00 46.93 O
ATOM 6 C5' C A 523 49.552-100.386 -34.789 1.00 50.62 C
ATOM 7 C4' C A 523 50.369-101.343 -35.617 1.00 51.94 C
ATOM 8 O4' C A 523 50.608-100.741 -36.919 1.00 52.37 O
ATOM 9 C3' C A 523 51.750-101.562 -35.033 1.00 51.33 C
ATOM 10 O3' C A 523 51.704-102.644 -34.129 1.00 48.09 O
ATOM 11 C2' C A 523 52.618-101.826 -36.252 1.00 46.74 C
ATOM 12 O2' C A 523 52.540-103.164 -36.677 1.00 49.95 O
ATOM 13 C1' C A 523 51.964-100.919 -37.293 1.00 52.80 C
ATOM 14 N1 C A 523 52.602 -99.585 -37.385 1.00 52.41 N
ATOM 15 C2 C A 523 53.852 -99.466 -38.044 1.00 50.01 C
ATOM 16 O2 C A 523 54.365-100.473 -38.563 1.00 48.51 O
ATOM 17 N3 C A 523 54.464 -98.256 -38.097 1.00 50.08 N
ATOM 18 C4 C A 523 53.873 -97.191 -37.542 1.00 54.02 C
ATOM 19 N4 C A 523 54.517 -95.996 -37.622 1.00 43.91 N
ATOM 20 C5 C A 523 52.601 -97.279 -36.882 1.00 57.03 C
ATOM 21 C6 C A 523 52.010 -98.483 -36.835 1.00 48.26 C
ATOM 22 P U A 524 52.574-102.567 -32.807 1.00 48.41 P
ATOM 23 OP1 U A 524 52.383-103.860 -32.127 1.00 51.15 O
ATOM 24 OP2 U A 524 52.178-101.315 -32.127 1.00 46.08 O
ATOM 25 O5' U A 524 54.076-102.442 -33.337 1.00 48.02 O
TER
ATOM 1 O3' U B 524 57.857-103.933 -33.426 1.00 53.51 O
ATOM 2 P G B 525 57.857-104.581 -31.942 1.00 52.47 P
ATOM 3 OP1 G B 525 58.679-105.810 -31.953 1.00 46.49 O
ATOM 4 OP2 G B 525 56.456-104.630 -31.415 1.00 48.40 O
ATOM 5 O5' G B 525 58.664-103.534 -31.082 1.00 36.41 O
ATOM 6 C5' G B 525 57.993-102.751 -30.150 1.00 39.39 C
ATOM 7 C4' G B 525 58.539-101.379 -30.191 1.00 42.55 C
ATOM 8 O4' G B 525 57.824-100.613 -31.177 1.00 46.85 O
ATOM 9 C3' G B 525 58.417-100.623 -28.885 1.00 48.56 C
ATOM 10 O3' G B 525 59.562-101.050 -28.118 1.00 48.32 O
ATOM 11 C2' G B 525 58.420 -99.172 -29.362 1.00 54.13 C
ATOM 12 O2' G B 525 59.722 -98.665 -29.568 1.00 60.56 O
ATOM 13 C1' G B 525 57.740 -99.277 -30.735 1.00 54.57 C
ATOM 14 N9 G B 525 56.346 -98.854 -30.777 1.00 52.93 N
ATOM 15 C8 G B 525 55.237 -99.640 -30.617 1.00 49.70 C
ATOM 16 N7 G B 525 54.121 -98.973 -30.707 1.00 50.32 N
ATOM 17 C5 G B 525 54.521 -97.664 -30.929 1.00 52.88 C
ATOM 18 C6 G B 525 53.757 -96.504 -31.094 1.00 52.25 C
ATOM 19 O6 G B 525 52.537 -96.390 -31.068 1.00 61.43 O
ATOM 20 N1 G B 525 54.554 -95.389 -31.314 1.00 49.43 N
ATOM 21 C2 G B 525 55.918 -95.394 -31.377 1.00 53.35 C
ATOM 22 N2 G B 525 56.501 -94.211 -31.623 1.00 43.12 N
ATOM 23 N3 G B 525 56.651 -96.481 -31.215 1.00 53.72 N
ATOM 24 C4 G B 525 55.890 -97.575 -30.991 1.00 51.47 C
ATOM 25 P A B 526 60.075-100.241 -26.828 1.00 39.99 P
ATOM 26 OP1 A B 526 60.341-101.267 -25.797 1.00 45.41 O
ATOM 27 OP2 A B 526 59.198 -99.092 -26.498 1.00 46.41 O
ATOM 28 O5' A B 526 61.472 -99.654 -27.309 1.00 42.58 O
TER
ATOM 2 P C A 523 50.072 -98.064 -33.666 1.00 53.40 P
ATOM 3 OP1 C A 523 51.346 -98.167 -32.901 1.00 53.53 O
ATOM 4 OP2 C A 523 49.638 -96.754 -34.233 1.00 51.12 O
ATOM 5 O5' C A 523 50.103 -99.080 -34.889 1.00 46.93 O
ATOM 6 C5' C A 523 49.552-100.386 -34.789 1.00 50.62 C
ATOM 7 C4' C A 523 50.369-101.343 -35.617 1.00 51.94 C
ATOM 8 O4' C A 523 50.608-100.741 -36.919 1.00 52.37 O
ATOM 9 C3' C A 523 51.750-101.562 -35.033 1.00 51.33 C
ATOM 10 O3' C A 523 51.704-102.644 -34.129 1.00 48.09 O
ATOM 11 C2' C A 523 52.618-101.826 -36.252 1.00 46.74 C
ATOM 12 O2' C A 523 52.540-103.164 -36.677 1.00 49.95 O
ATOM 13 C1' C A 523 51.964-100.919 -37.293 1.00 52.80 C
ATOM 14 N1 C A 523 52.602 -99.585 -37.385 1.00 52.41 N
ATOM 15 C2 C A 523 53.852 -99.466 -38.044 1.00 50.01 C
ATOM 16 O2 C A 523 54.365-100.473 -38.563 1.00 48.51 O
ATOM 17 N3 C A 523 54.464 -98.256 -38.097 1.00 50.08 N
ATOM 18 C4 C A 523 53.873 -97.191 -37.542 1.00 54.02 C
ATOM 19 N4 C A 523 54.517 -95.996 -37.622 1.00 43.91 N
ATOM 20 C5 C A 523 52.601 -97.279 -36.882 1.00 57.03 C
ATOM 21 C6 C A 523 52.010 -98.483 -36.835 1.00 48.26 C
ATOM 22 P U A 524 52.574-102.567 -32.807 1.00 48.41 P
ATOM 23 OP1 U A 524 52.383-103.860 -32.127 1.00 51.15 O
ATOM 24 OP2 U A 524 52.178-101.315 -32.127 1.00 46.08 O
ATOM 25 O5' U A 524 54.076-102.442 -33.337 1.00 48.02 O
TER
ATOM 1 O3' U B 524 57.857-103.933 -33.426 1.00 53.51 O
ATOM 2 P G B 525 57.857-104.581 -31.942 1.00 52.47 P
ATOM 3 OP1 G B 525 58.679-105.810 -31.953 1.00 46.49 O
ATOM 4 OP2 G B 525 56.456-104.630 -31.415 1.00 48.40 O
ATOM 5 O5' G B 525 58.664-103.534 -31.082 1.00 36.41 O
ATOM 6 C5' G B 525 57.993-102.751 -30.150 1.00 39.39 C
ATOM 7 C4' G B 525 58.539-101.379 -30.191 1.00 42.55 C
ATOM 8 O4' G B 525 57.824-100.613 -31.177 1.00 46.85 O
ATOM 9 C3' G B 525 58.417-100.623 -28.885 1.00 48.56 C
ATOM 10 O3' G B 525 59.562-101.050 -28.118 1.00 48.32 O
ATOM 11 C2' G B 525 58.420 -99.172 -29.362 1.00 54.13 C
ATOM 12 O2' G B 525 59.722 -98.665 -29.568 1.00 60.56 O
ATOM 13 C1' G B 525 57.740 -99.277 -30.735 1.00 54.57 C
ATOM 14 N9 G B 525 56.346 -98.854 -30.777 1.00 52.93 N
ATOM 15 C8 G B 525 55.237 -99.640 -30.617 1.00 49.70 C
ATOM 16 N7 G B 525 54.121 -98.973 -30.707 1.00 50.32 N
ATOM 17 C5 G B 525 54.521 -97.664 -30.929 1.00 52.88 C
ATOM 18 C6 G B 525 53.757 -96.504 -31.094 1.00 52.25 C
ATOM 19 O6 G B 525 52.537 -96.390 -31.068 1.00 61.43 O
ATOM 20 N1 G B 525 54.554 -95.389 -31.314 1.00 49.43 N
ATOM 21 C2 G B 525 55.918 -95.394 -31.377 1.00 53.35 C
ATOM 22 N2 G B 525 56.501 -94.211 -31.623 1.00 43.12 N
ATOM 23 N3 G B 525 56.651 -96.481 -31.215 1.00 53.72 N
ATOM 24 C4 G B 525 55.890 -97.575 -30.991 1.00 51.47 C
ATOM 25 P A B 526 60.075-100.241 -26.828 1.00 39.99 P
ATOM 26 OP1 A B 526 60.341-101.267 -25.797 1.00 45.41 O
ATOM 27 OP2 A B 526 59.198 -99.092 -26.498 1.00 46.41 O
ATOM 28 O5' A B 526 61.472 -99.654 -27.309 1.00 42.58 O
TER
Atoms:
C2: (53.852,-99.466,-38.044)
OP1: (51.346,-98.167,-32.901)
OP2: (49.638,-96.754,-34.233)
C4: (53.873,-97.191,-37.542)
O5': (50.103,-99.080,-34.889)
C3': (51.750,-101.562,-35.033)
C1': (51.964,-100.919,-37.293)
O4': (50.608,-100.741,-36.919)
C5': (49.552,-100.386,-34.789)
P: (50.072,-98.064,-33.666)
O2: (54.365,-100.473,-38.563)
C4': (50.369,-101.343,-35.617)
C2': (52.618,-101.826,-36.252)
O2': (52.540,-103.164,-36.677)
N1: (52.602,-99.585,-37.385)
N3: (54.464,-98.256,-38.097)
N4: (54.517,-95.996,-37.622)
C6: (52.010,-98.483,-36.835)
C5: (52.601,-97.279,-36.882)
O3': (51.704,-102.644,-34.129)
OP1: (51.346,-98.167,-32.901)
OP2: (49.638,-96.754,-34.233)
C4: (53.873,-97.191,-37.542)
O5': (50.103,-99.080,-34.889)
C3': (51.750,-101.562,-35.033)
C1': (51.964,-100.919,-37.293)
O4': (50.608,-100.741,-36.919)
C5': (49.552,-100.386,-34.789)
P: (50.072,-98.064,-33.666)
O2: (54.365,-100.473,-38.563)
C4': (50.369,-101.343,-35.617)
C2': (52.618,-101.826,-36.252)
O2': (52.540,-103.164,-36.677)
N1: (52.602,-99.585,-37.385)
N3: (54.464,-98.256,-38.097)
N4: (54.517,-95.996,-37.622)
C6: (52.010,-98.483,-36.835)
C5: (52.601,-97.279,-36.882)
O3': (51.704,-102.644,-34.129)
OP1: (58.679,-105.810,-31.953)
OP2: (56.456,-104.630,-31.415)
C3': (58.417,-100.623,-28.885)
C1': (57.740,-99.277,-30.735)
C5': (57.993,-102.751,-30.150)
O6: (52.537,-96.390,-31.068)
O4': (57.824,-100.613,-31.177)
C8: (55.237,-99.640,-30.617)
C2: (55.918,-95.394,-31.377)
C6: (53.757,-96.504,-31.094)
C5: (54.521,-97.664,-30.929)
C4: (55.890,-97.575,-30.991)
P: (57.857,-104.581,-31.942)
C4': (58.539,-101.379,-30.191)
C2': (58.420,-99.172,-29.362)
O2': (59.722,-98.665,-29.568)
N1: (54.554,-95.389,-31.314)
N2: (56.501,-94.211,-31.623)
N3: (56.651,-96.481,-31.215)
N7: (54.121,-98.973,-30.707)
N9: (56.346,-98.854,-30.777)
O5': (58.664,-103.534,-31.082)
O3': (59.562,-101.050,-28.118)
OP2: (56.456,-104.630,-31.415)
C3': (58.417,-100.623,-28.885)
C1': (57.740,-99.277,-30.735)
C5': (57.993,-102.751,-30.150)
O6: (52.537,-96.390,-31.068)
O4': (57.824,-100.613,-31.177)
C8: (55.237,-99.640,-30.617)
C2: (55.918,-95.394,-31.377)
C6: (53.757,-96.504,-31.094)
C5: (54.521,-97.664,-30.929)
C4: (55.890,-97.575,-30.991)
P: (57.857,-104.581,-31.942)
C4': (58.539,-101.379,-30.191)
C2': (58.420,-99.172,-29.362)
O2': (59.722,-98.665,-29.568)
N1: (54.554,-95.389,-31.314)
N2: (56.501,-94.211,-31.623)
N3: (56.651,-96.481,-31.215)
N7: (54.121,-98.973,-30.707)
N9: (56.346,-98.854,-30.777)
O5': (58.664,-103.534,-31.082)
O3': (59.562,-101.050,-28.118)
Image (generated by PyMOL):