Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A523:A525
Extra
PDB:
ATOM 1 O3' C A 522 -48.879 -99.527 32.279 1.00 12.97 O
ATOM 2 P C A 523 -50.177 -99.000 33.050 1.00 24.08 P
ATOM 3 OP1 C A 523 -51.350 -99.419 32.244 1.00 47.32 O
ATOM 4 OP2 C A 523 -49.978 -97.564 33.369 1.00 47.37 O
ATOM 5 O5' C A 523 -50.203 -99.793 34.427 1.00 7.55 O
ATOM 6 C5' C A 523 -49.654-101.115 34.546 1.00 7.55 C
ATOM 7 C4' C A 523 -50.625-102.017 35.275 1.00 7.55 C
ATOM 8 O4' C A 523 -51.050-101.370 36.504 1.00 7.55 O
ATOM 9 C3' C A 523 -51.925-102.308 34.543 1.00 7.55 C
ATOM 10 O3' C A 523 -51.760-103.395 33.639 1.00 7.55 O
ATOM 11 C2' C A 523 -52.901-102.613 35.679 1.00 7.55 C
ATOM 12 O2' C A 523 -52.789-103.918 36.203 1.00 7.55 O
ATOM 13 C1' C A 523 -52.418-101.664 36.768 1.00 7.55 C
ATOM 14 N1 C A 523 -53.188-100.403 36.836 1.00 34.11 N
ATOM 15 C2 C A 523 -54.413-100.388 37.531 1.00 34.11 C
ATOM 16 O2 C A 523 -54.834-101.437 38.026 1.00 34.03 O
ATOM 17 N3 C A 523 -55.102 -99.228 37.638 1.00 34.22 N
ATOM 18 C4 C A 523 -54.618 -98.113 37.086 1.00 34.28 C
ATOM 19 N4 C A 523 -55.305 -96.984 37.249 1.00 34.18 N
ATOM 20 C5 C A 523 -53.395 -98.104 36.347 1.00 34.38 C
ATOM 21 C6 C A 523 -52.720 -99.258 36.247 1.00 34.41 C
ATOM 22 P U A 524 -52.634-103.452 32.293 1.00 13.70 P
ATOM 23 OP1 U A 524 -52.369-104.760 31.670 1.00 40.14 O
ATOM 24 OP2 U A 524 -52.432-102.208 31.494 1.00 39.79 O
ATOM 25 O5' U A 524 -54.129-103.494 32.827 1.00 4.37 O
TER
ATOM 1 O3' U B 524 -57.585-104.982 32.915 1.00 4.37 O
ATOM 2 P G B 525 -57.793-105.278 31.359 1.00 20.97 P
ATOM 3 OP1 G B 525 -58.760-106.377 31.187 1.00 0.79 O
ATOM 4 OP2 G B 525 -56.451-105.351 30.710 1.00 0.79 O
ATOM 5 O5' G B 525 -58.589-104.012 30.866 1.00 48.61 O
ATOM 6 C5' G B 525 -58.498-103.618 29.529 1.00 48.61 C
ATOM 7 C4' G B 525 -58.781-102.167 29.436 1.00 48.61 C
ATOM 8 O4' G B 525 -57.957-101.449 30.375 1.00 48.61 O
ATOM 9 C3' G B 525 -58.498-101.530 28.093 1.00 48.61 C
ATOM 10 O3' G B 525 -59.629-101.850 27.268 1.00 48.61 O
ATOM 11 C2' G B 525 -58.361-100.067 28.480 1.00 48.61 C
ATOM 12 O2' G B 525 -59.648 -99.498 28.594 1.00 48.61 O
ATOM 13 C1' G B 525 -57.782-100.146 29.897 1.00 48.61 C
ATOM 14 N9 G B 525 -56.400 -99.713 30.094 1.00 23.50 N
ATOM 15 C8 G B 525 -55.233-100.419 29.908 1.00 23.50 C
ATOM 16 N7 G B 525 -54.159 -99.713 30.170 1.00 23.50 N
ATOM 17 C5 G B 525 -54.650 -98.469 30.551 1.00 23.50 C
ATOM 18 C6 G B 525 -53.975 -97.282 30.933 1.00 23.50 C
ATOM 19 O6 G B 525 -52.761 -97.072 31.009 1.00 23.50 O
ATOM 20 N1 G B 525 -54.868 -96.264 31.236 1.00 23.50 N
ATOM 21 C2 G B 525 -56.233 -96.361 31.171 1.00 23.50 C
ATOM 22 N2 G B 525 -56.928 -95.276 31.504 1.00 23.50 N
ATOM 23 N3 G B 525 -56.873 -97.445 30.811 1.00 23.50 N
ATOM 24 C4 G B 525 -56.028 -98.456 30.517 1.00 23.50 C
ATOM 25 P A B 526 -60.083-100.897 26.050 1.00 40.04 P
ATOM 26 OP1 A B 526 -60.293-101.788 24.888 1.00 69.43 O
ATOM 27 OP2 A B 526 -59.173 -99.741 25.915 1.00 69.43 O
ATOM 28 O5' A B 526 -61.523-100.405 26.522 1.00 4.86 O
TER
ATOM 2 P C A 523 -50.177 -99.000 33.050 1.00 24.08 P
ATOM 3 OP1 C A 523 -51.350 -99.419 32.244 1.00 47.32 O
ATOM 4 OP2 C A 523 -49.978 -97.564 33.369 1.00 47.37 O
ATOM 5 O5' C A 523 -50.203 -99.793 34.427 1.00 7.55 O
ATOM 6 C5' C A 523 -49.654-101.115 34.546 1.00 7.55 C
ATOM 7 C4' C A 523 -50.625-102.017 35.275 1.00 7.55 C
ATOM 8 O4' C A 523 -51.050-101.370 36.504 1.00 7.55 O
ATOM 9 C3' C A 523 -51.925-102.308 34.543 1.00 7.55 C
ATOM 10 O3' C A 523 -51.760-103.395 33.639 1.00 7.55 O
ATOM 11 C2' C A 523 -52.901-102.613 35.679 1.00 7.55 C
ATOM 12 O2' C A 523 -52.789-103.918 36.203 1.00 7.55 O
ATOM 13 C1' C A 523 -52.418-101.664 36.768 1.00 7.55 C
ATOM 14 N1 C A 523 -53.188-100.403 36.836 1.00 34.11 N
ATOM 15 C2 C A 523 -54.413-100.388 37.531 1.00 34.11 C
ATOM 16 O2 C A 523 -54.834-101.437 38.026 1.00 34.03 O
ATOM 17 N3 C A 523 -55.102 -99.228 37.638 1.00 34.22 N
ATOM 18 C4 C A 523 -54.618 -98.113 37.086 1.00 34.28 C
ATOM 19 N4 C A 523 -55.305 -96.984 37.249 1.00 34.18 N
ATOM 20 C5 C A 523 -53.395 -98.104 36.347 1.00 34.38 C
ATOM 21 C6 C A 523 -52.720 -99.258 36.247 1.00 34.41 C
ATOM 22 P U A 524 -52.634-103.452 32.293 1.00 13.70 P
ATOM 23 OP1 U A 524 -52.369-104.760 31.670 1.00 40.14 O
ATOM 24 OP2 U A 524 -52.432-102.208 31.494 1.00 39.79 O
ATOM 25 O5' U A 524 -54.129-103.494 32.827 1.00 4.37 O
TER
ATOM 1 O3' U B 524 -57.585-104.982 32.915 1.00 4.37 O
ATOM 2 P G B 525 -57.793-105.278 31.359 1.00 20.97 P
ATOM 3 OP1 G B 525 -58.760-106.377 31.187 1.00 0.79 O
ATOM 4 OP2 G B 525 -56.451-105.351 30.710 1.00 0.79 O
ATOM 5 O5' G B 525 -58.589-104.012 30.866 1.00 48.61 O
ATOM 6 C5' G B 525 -58.498-103.618 29.529 1.00 48.61 C
ATOM 7 C4' G B 525 -58.781-102.167 29.436 1.00 48.61 C
ATOM 8 O4' G B 525 -57.957-101.449 30.375 1.00 48.61 O
ATOM 9 C3' G B 525 -58.498-101.530 28.093 1.00 48.61 C
ATOM 10 O3' G B 525 -59.629-101.850 27.268 1.00 48.61 O
ATOM 11 C2' G B 525 -58.361-100.067 28.480 1.00 48.61 C
ATOM 12 O2' G B 525 -59.648 -99.498 28.594 1.00 48.61 O
ATOM 13 C1' G B 525 -57.782-100.146 29.897 1.00 48.61 C
ATOM 14 N9 G B 525 -56.400 -99.713 30.094 1.00 23.50 N
ATOM 15 C8 G B 525 -55.233-100.419 29.908 1.00 23.50 C
ATOM 16 N7 G B 525 -54.159 -99.713 30.170 1.00 23.50 N
ATOM 17 C5 G B 525 -54.650 -98.469 30.551 1.00 23.50 C
ATOM 18 C6 G B 525 -53.975 -97.282 30.933 1.00 23.50 C
ATOM 19 O6 G B 525 -52.761 -97.072 31.009 1.00 23.50 O
ATOM 20 N1 G B 525 -54.868 -96.264 31.236 1.00 23.50 N
ATOM 21 C2 G B 525 -56.233 -96.361 31.171 1.00 23.50 C
ATOM 22 N2 G B 525 -56.928 -95.276 31.504 1.00 23.50 N
ATOM 23 N3 G B 525 -56.873 -97.445 30.811 1.00 23.50 N
ATOM 24 C4 G B 525 -56.028 -98.456 30.517 1.00 23.50 C
ATOM 25 P A B 526 -60.083-100.897 26.050 1.00 40.04 P
ATOM 26 OP1 A B 526 -60.293-101.788 24.888 1.00 69.43 O
ATOM 27 OP2 A B 526 -59.173 -99.741 25.915 1.00 69.43 O
ATOM 28 O5' A B 526 -61.523-100.405 26.522 1.00 4.86 O
TER
Atoms:
C2: (-54.413,-100.388,37.531)
OP1: (-51.350,-99.419,32.244)
OP2: (-49.978,-97.564,33.369)
C4: (-54.618,-98.113,37.086)
O5': (-50.203,-99.793,34.427)
C3': (-51.925,-102.308,34.543)
C1': (-52.418,-101.664,36.768)
O4': (-51.050,-101.370,36.504)
C5': (-49.654,-101.115,34.546)
P: (-50.177,-99.000,33.050)
O2: (-54.834,-101.437,38.026)
C4': (-50.625,-102.017,35.275)
C2': (-52.901,-102.613,35.679)
O2': (-52.789,-103.918,36.203)
N1: (-53.188,-100.403,36.836)
N3: (-55.102,-99.228,37.638)
N4: (-55.305,-96.984,37.249)
C6: (-52.720,-99.258,36.247)
C5: (-53.395,-98.104,36.347)
O3': (-51.760,-103.395,33.639)
OP1: (-51.350,-99.419,32.244)
OP2: (-49.978,-97.564,33.369)
C4: (-54.618,-98.113,37.086)
O5': (-50.203,-99.793,34.427)
C3': (-51.925,-102.308,34.543)
C1': (-52.418,-101.664,36.768)
O4': (-51.050,-101.370,36.504)
C5': (-49.654,-101.115,34.546)
P: (-50.177,-99.000,33.050)
O2: (-54.834,-101.437,38.026)
C4': (-50.625,-102.017,35.275)
C2': (-52.901,-102.613,35.679)
O2': (-52.789,-103.918,36.203)
N1: (-53.188,-100.403,36.836)
N3: (-55.102,-99.228,37.638)
N4: (-55.305,-96.984,37.249)
C6: (-52.720,-99.258,36.247)
C5: (-53.395,-98.104,36.347)
O3': (-51.760,-103.395,33.639)
OP1: (-58.760,-106.377,31.187)
OP2: (-56.451,-105.351,30.710)
C3': (-58.498,-101.530,28.093)
C1': (-57.782,-100.146,29.897)
C5': (-58.498,-103.618,29.529)
O6: (-52.761,-97.072,31.009)
O4': (-57.957,-101.449,30.375)
C8: (-55.233,-100.419,29.908)
C2: (-56.233,-96.361,31.171)
C6: (-53.975,-97.282,30.933)
C5: (-54.650,-98.469,30.551)
C4: (-56.028,-98.456,30.517)
P: (-57.793,-105.278,31.359)
C4': (-58.781,-102.167,29.436)
C2': (-58.361,-100.067,28.480)
O2': (-59.648,-99.498,28.594)
N1: (-54.868,-96.264,31.236)
N2: (-56.928,-95.276,31.504)
N3: (-56.873,-97.445,30.811)
N7: (-54.159,-99.713,30.170)
N9: (-56.400,-99.713,30.094)
O5': (-58.589,-104.012,30.866)
O3': (-59.629,-101.850,27.268)
OP2: (-56.451,-105.351,30.710)
C3': (-58.498,-101.530,28.093)
C1': (-57.782,-100.146,29.897)
C5': (-58.498,-103.618,29.529)
O6: (-52.761,-97.072,31.009)
O4': (-57.957,-101.449,30.375)
C8: (-55.233,-100.419,29.908)
C2: (-56.233,-96.361,31.171)
C6: (-53.975,-97.282,30.933)
C5: (-54.650,-98.469,30.551)
C4: (-56.028,-98.456,30.517)
P: (-57.793,-105.278,31.359)
C4': (-58.781,-102.167,29.436)
C2': (-58.361,-100.067,28.480)
O2': (-59.648,-99.498,28.594)
N1: (-54.868,-96.264,31.236)
N2: (-56.928,-95.276,31.504)
N3: (-56.873,-97.445,30.811)
N7: (-54.159,-99.713,30.170)
N9: (-56.400,-99.713,30.094)
O5': (-58.589,-104.012,30.866)
O3': (-59.629,-101.850,27.268)
Image (generated by PyMOL):