Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AM1:B33:B35
Extra
PDB:
ATOM 1 O3' U A 32 -14.469 5.890 8.598 1.00112.01 O
ATOM 2 P U A 33 -15.789 5.056 8.222 1.00158.03 P
ATOM 3 OP1 U A 33 -16.082 5.335 6.793 1.00159.13 O
ATOM 4 OP2 U A 33 -16.823 5.381 9.237 1.00157.19 O
ATOM 5 O5' U A 33 -15.248 3.568 8.395 1.00243.28 O
ATOM 6 C5' U A 33 -15.543 2.801 9.556 1.00241.81 C
ATOM 7 C4' U A 33 -17.004 2.458 9.601 1.00240.78 C
ATOM 8 O4' U A 33 -17.534 2.744 8.282 1.00238.33 O
ATOM 9 C3' U A 33 -17.289 0.991 9.895 1.00241.09 C
ATOM 10 O3' U A 33 -18.339 0.842 10.852 1.00244.14 O
ATOM 11 C2' U A 33 -17.630 0.382 8.531 1.00237.94 C
ATOM 12 O2' U A 33 -18.698 -0.541 8.550 1.00237.96 O
ATOM 13 C1' U A 33 -17.962 1.568 7.632 1.00235.11 C
ATOM 14 N1 U A 33 -17.053 1.501 6.463 1.00227.78 N
ATOM 15 C2 U A 33 -17.036 0.369 5.671 1.00226.43 C
ATOM 16 O2 U A 33 -17.753 -0.597 5.869 1.00227.13 O
ATOM 17 N3 U A 33 -16.146 0.411 4.624 1.00223.97 N
ATOM 18 C4 U A 33 -15.283 1.435 4.291 1.00220.89 C
ATOM 19 O4 U A 33 -14.542 1.319 3.315 1.00218.76 O
ATOM 20 C5 U A 33 -15.352 2.566 5.159 1.00220.84 C
ATOM 21 C6 U A 33 -16.210 2.549 6.181 1.00223.20 C
ATOM 22 P C A 34 -17.871 0.435 12.342 1.00150.36 P
ATOM 23 OP1 C A 34 -18.897 0.922 13.296 1.00153.27 O
ATOM 24 OP2 C A 34 -16.472 0.919 12.472 1.00143.88 O
ATOM 25 O5' C A 34 -17.901 -1.155 12.266 1.00167.76 O
TER
ATOM 1 O3' C B 34 -17.023 -4.256 12.344 1.00157.13 O
ATOM 2 P G B 35 -15.922 -4.585 13.455 1.00220.98 P
ATOM 3 OP1 G B 35 -16.618 -5.357 14.516 1.00220.31 O
ATOM 4 OP2 G B 35 -15.286 -3.291 13.808 1.00220.56 O
ATOM 5 O5' G B 35 -14.940 -5.526 12.620 1.00149.19 O
ATOM 6 C5' G B 35 -13.900 -6.294 13.205 1.00142.66 C
ATOM 7 C4' G B 35 -12.612 -6.097 12.450 1.00137.46 C
ATOM 8 O4' G B 35 -12.856 -5.193 11.340 1.00133.79 O
ATOM 9 C3' G B 35 -11.509 -5.407 13.234 1.00137.46 C
ATOM 10 O3' G B 35 -10.781 -6.266 14.092 1.00139.78 O
ATOM 11 C2' G B 35 -10.680 -4.768 12.132 1.00133.90 C
ATOM 12 O2' G B 35 -9.938 -5.763 11.443 1.00131.54 O
ATOM 13 C1' G B 35 -11.795 -4.270 11.217 1.00133.50 C
ATOM 14 N9 G B 35 -12.302 -2.959 11.670 1.00136.06 N
ATOM 15 C8 G B 35 -12.946 -2.707 12.860 1.00137.24 C
ATOM 16 N7 G B 35 -13.296 -1.464 13.024 1.00136.24 N
ATOM 17 C5 G B 35 -12.852 -0.846 11.866 1.00137.86 C
ATOM 18 C6 G B 35 -12.947 0.512 11.471 1.00140.81 C
ATOM 19 O6 G B 35 -13.458 1.452 12.085 1.00142.80 O
ATOM 20 N1 G B 35 -12.371 0.728 10.224 1.00141.20 N
ATOM 21 C2 G B 35 -11.774 -0.241 9.451 1.00139.08 C
ATOM 22 N2 G B 35 -11.282 0.173 8.272 1.00135.53 N
ATOM 23 N3 G B 35 -11.683 -1.517 9.807 1.00138.51 N
ATOM 24 C4 G B 35 -12.237 -1.748 11.019 1.00137.35 C
ATOM 25 P G B 36 -10.676 -5.857 15.644 1.00132.57 P
ATOM 26 OP1 G B 36 -9.761 -6.812 16.323 1.00129.10 O
ATOM 27 OP2 G B 36 -12.089 -5.764 16.084 1.00133.58 O
ATOM 28 O5' G B 36 -10.026 -4.403 15.594 1.00134.26 O
TER
ATOM 2 P U A 33 -15.789 5.056 8.222 1.00158.03 P
ATOM 3 OP1 U A 33 -16.082 5.335 6.793 1.00159.13 O
ATOM 4 OP2 U A 33 -16.823 5.381 9.237 1.00157.19 O
ATOM 5 O5' U A 33 -15.248 3.568 8.395 1.00243.28 O
ATOM 6 C5' U A 33 -15.543 2.801 9.556 1.00241.81 C
ATOM 7 C4' U A 33 -17.004 2.458 9.601 1.00240.78 C
ATOM 8 O4' U A 33 -17.534 2.744 8.282 1.00238.33 O
ATOM 9 C3' U A 33 -17.289 0.991 9.895 1.00241.09 C
ATOM 10 O3' U A 33 -18.339 0.842 10.852 1.00244.14 O
ATOM 11 C2' U A 33 -17.630 0.382 8.531 1.00237.94 C
ATOM 12 O2' U A 33 -18.698 -0.541 8.550 1.00237.96 O
ATOM 13 C1' U A 33 -17.962 1.568 7.632 1.00235.11 C
ATOM 14 N1 U A 33 -17.053 1.501 6.463 1.00227.78 N
ATOM 15 C2 U A 33 -17.036 0.369 5.671 1.00226.43 C
ATOM 16 O2 U A 33 -17.753 -0.597 5.869 1.00227.13 O
ATOM 17 N3 U A 33 -16.146 0.411 4.624 1.00223.97 N
ATOM 18 C4 U A 33 -15.283 1.435 4.291 1.00220.89 C
ATOM 19 O4 U A 33 -14.542 1.319 3.315 1.00218.76 O
ATOM 20 C5 U A 33 -15.352 2.566 5.159 1.00220.84 C
ATOM 21 C6 U A 33 -16.210 2.549 6.181 1.00223.20 C
ATOM 22 P C A 34 -17.871 0.435 12.342 1.00150.36 P
ATOM 23 OP1 C A 34 -18.897 0.922 13.296 1.00153.27 O
ATOM 24 OP2 C A 34 -16.472 0.919 12.472 1.00143.88 O
ATOM 25 O5' C A 34 -17.901 -1.155 12.266 1.00167.76 O
TER
ATOM 1 O3' C B 34 -17.023 -4.256 12.344 1.00157.13 O
ATOM 2 P G B 35 -15.922 -4.585 13.455 1.00220.98 P
ATOM 3 OP1 G B 35 -16.618 -5.357 14.516 1.00220.31 O
ATOM 4 OP2 G B 35 -15.286 -3.291 13.808 1.00220.56 O
ATOM 5 O5' G B 35 -14.940 -5.526 12.620 1.00149.19 O
ATOM 6 C5' G B 35 -13.900 -6.294 13.205 1.00142.66 C
ATOM 7 C4' G B 35 -12.612 -6.097 12.450 1.00137.46 C
ATOM 8 O4' G B 35 -12.856 -5.193 11.340 1.00133.79 O
ATOM 9 C3' G B 35 -11.509 -5.407 13.234 1.00137.46 C
ATOM 10 O3' G B 35 -10.781 -6.266 14.092 1.00139.78 O
ATOM 11 C2' G B 35 -10.680 -4.768 12.132 1.00133.90 C
ATOM 12 O2' G B 35 -9.938 -5.763 11.443 1.00131.54 O
ATOM 13 C1' G B 35 -11.795 -4.270 11.217 1.00133.50 C
ATOM 14 N9 G B 35 -12.302 -2.959 11.670 1.00136.06 N
ATOM 15 C8 G B 35 -12.946 -2.707 12.860 1.00137.24 C
ATOM 16 N7 G B 35 -13.296 -1.464 13.024 1.00136.24 N
ATOM 17 C5 G B 35 -12.852 -0.846 11.866 1.00137.86 C
ATOM 18 C6 G B 35 -12.947 0.512 11.471 1.00140.81 C
ATOM 19 O6 G B 35 -13.458 1.452 12.085 1.00142.80 O
ATOM 20 N1 G B 35 -12.371 0.728 10.224 1.00141.20 N
ATOM 21 C2 G B 35 -11.774 -0.241 9.451 1.00139.08 C
ATOM 22 N2 G B 35 -11.282 0.173 8.272 1.00135.53 N
ATOM 23 N3 G B 35 -11.683 -1.517 9.807 1.00138.51 N
ATOM 24 C4 G B 35 -12.237 -1.748 11.019 1.00137.35 C
ATOM 25 P G B 36 -10.676 -5.857 15.644 1.00132.57 P
ATOM 26 OP1 G B 36 -9.761 -6.812 16.323 1.00129.10 O
ATOM 27 OP2 G B 36 -12.089 -5.764 16.084 1.00133.58 O
ATOM 28 O5' G B 36 -10.026 -4.403 15.594 1.00134.26 O
TER
Atoms:
C4: (-15.283,1.435,4.291)
N3: (-16.146,0.411,4.624)
OP1: (-16.082,5.335,6.793)
OP2: (-16.823,5.381,9.237)
C2: (-17.036,0.369,5.671)
C1': (-17.962,1.568,7.632)
C3': (-17.289,0.991,9.895)
O5': (-15.248,3.568,8.395)
O4': (-17.534,2.744,8.282)
C5': (-15.543,2.801,9.556)
P: (-15.789,5.056,8.222)
C4': (-17.004,2.458,9.601)
C2': (-17.630,0.382,8.531)
O2': (-18.698,-0.541,8.550)
N1: (-17.053,1.501,6.463)
O4: (-14.542,1.319,3.315)
O2: (-17.753,-0.597,5.869)
C6: (-16.210,2.549,6.181)
C5: (-15.352,2.566,5.159)
O3': (-18.339,0.842,10.852)
N3: (-16.146,0.411,4.624)
OP1: (-16.082,5.335,6.793)
OP2: (-16.823,5.381,9.237)
C2: (-17.036,0.369,5.671)
C1': (-17.962,1.568,7.632)
C3': (-17.289,0.991,9.895)
O5': (-15.248,3.568,8.395)
O4': (-17.534,2.744,8.282)
C5': (-15.543,2.801,9.556)
P: (-15.789,5.056,8.222)
C4': (-17.004,2.458,9.601)
C2': (-17.630,0.382,8.531)
O2': (-18.698,-0.541,8.550)
N1: (-17.053,1.501,6.463)
O4: (-14.542,1.319,3.315)
O2: (-17.753,-0.597,5.869)
C6: (-16.210,2.549,6.181)
C5: (-15.352,2.566,5.159)
O3': (-18.339,0.842,10.852)
OP1: (-16.618,-5.357,14.516)
OP2: (-15.286,-3.291,13.808)
C3': (-11.509,-5.407,13.234)
C1': (-11.795,-4.270,11.217)
C5': (-13.900,-6.294,13.205)
O6: (-13.458,1.452,12.085)
O4': (-12.856,-5.193,11.340)
C8: (-12.946,-2.707,12.860)
C2: (-11.774,-0.241,9.451)
C6: (-12.947,0.512,11.471)
C5: (-12.852,-0.846,11.866)
C4: (-12.237,-1.748,11.019)
P: (-15.922,-4.585,13.455)
C4': (-12.612,-6.097,12.450)
C2': (-10.680,-4.768,12.132)
O2': (-9.938,-5.763,11.443)
N1: (-12.371,0.728,10.224)
N2: (-11.282,0.173,8.272)
N3: (-11.683,-1.517,9.807)
N7: (-13.296,-1.464,13.024)
N9: (-12.302,-2.959,11.670)
O5': (-14.940,-5.526,12.620)
O3': (-10.781,-6.266,14.092)
OP2: (-15.286,-3.291,13.808)
C3': (-11.509,-5.407,13.234)
C1': (-11.795,-4.270,11.217)
C5': (-13.900,-6.294,13.205)
O6: (-13.458,1.452,12.085)
O4': (-12.856,-5.193,11.340)
C8: (-12.946,-2.707,12.860)
C2: (-11.774,-0.241,9.451)
C6: (-12.947,0.512,11.471)
C5: (-12.852,-0.846,11.866)
C4: (-12.237,-1.748,11.019)
P: (-15.922,-4.585,13.455)
C4': (-12.612,-6.097,12.450)
C2': (-10.680,-4.768,12.132)
O2': (-9.938,-5.763,11.443)
N1: (-12.371,0.728,10.224)
N2: (-11.282,0.173,8.272)
N3: (-11.683,-1.517,9.807)
N7: (-13.296,-1.464,13.024)
N9: (-12.302,-2.959,11.670)
O5': (-14.940,-5.526,12.620)
O3': (-10.781,-6.266,14.092)
Image (generated by PyMOL):