Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:02566:02735
Extra
PDB:
ATOM 1 O3' U A2565 68.325 173.756 112.729 1.00 49.07 O
ATOM 2 P A A2566 66.784 173.810 113.190 1.00 50.14 P
ATOM 3 OP1 A A2566 66.174 172.462 113.061 1.00 51.99 O
ATOM 4 OP2 A A2566 66.164 174.961 112.486 1.00 47.67 O
ATOM 5 O5' A A2566 66.859 174.189 114.737 1.00 49.80 O
ATOM 6 C5' A A2566 67.290 175.501 115.152 1.00 47.42 C
ATOM 7 C4' A A2566 66.132 176.265 115.749 1.00 47.38 C
ATOM 8 O4' A A2566 65.758 175.684 117.029 1.00 46.58 O
ATOM 9 C3' A A2566 66.417 177.714 116.094 1.00 46.19 C
ATOM 10 O3' A A2566 66.336 178.547 114.949 1.00 45.14 O
ATOM 11 C2' A A2566 65.320 178.008 117.104 1.00 46.55 C
ATOM 12 O2' A A2566 64.058 178.185 116.500 1.00 48.68 O
ATOM 13 C1' A A2566 65.303 176.706 117.902 1.00 46.09 C
ATOM 14 N9 A A2566 66.212 176.790 119.046 1.00 47.63 N
ATOM 15 C8 A A2566 67.518 176.371 119.133 1.00 47.53 C
ATOM 16 N7 A A2566 68.088 176.654 120.277 1.00 48.21 N
ATOM 17 C5 A A2566 67.088 177.294 121.000 1.00 48.98 C
ATOM 18 C6 A A2566 67.062 177.862 122.292 1.00 49.79 C
ATOM 19 N6 A A2566 68.118 177.894 123.115 1.00 48.11 N
ATOM 20 N1 A A2566 65.900 178.410 122.711 1.00 48.47 N
ATOM 21 C2 A A2566 64.849 178.394 121.883 1.00 47.69 C
ATOM 22 N3 A A2566 64.753 177.906 120.651 1.00 46.79 N
ATOM 23 C4 A A2566 65.921 177.364 120.262 1.00 47.72 C
ATOM 24 P C A2567 67.629 179.374 114.475 1.00 47.26 P
ATOM 25 OP1 C A2567 67.176 180.296 113.396 1.00 46.06 O
ATOM 26 OP2 C A2567 68.744 178.427 114.214 1.00 46.15 O
ATOM 27 O5' C A2567 68.038 180.235 115.748 1.00 46.72 O
TER
ATOM 1 O3' C B2734 60.577 181.139 120.403 1.00 53.66 O
ATOM 2 P A B2735 59.039 181.565 120.354 1.00 55.73 P
ATOM 3 OP1 A B2735 58.760 182.155 119.027 1.00 56.79 O
ATOM 4 OP2 A B2735 58.719 182.329 121.586 1.00 55.99 O
ATOM 5 O5' A B2735 58.292 180.172 120.458 1.00 55.65 O
ATOM 6 C5' A B2735 58.482 179.363 121.610 1.00 58.22 C
ATOM 7 C4' A B2735 57.756 178.062 121.462 1.00 58.46 C
ATOM 8 O4' A B2735 58.417 177.244 120.453 1.00 59.80 O
ATOM 9 C3' A B2735 57.766 177.236 122.741 1.00 59.08 C
ATOM 10 O3' A B2735 56.502 176.599 122.841 1.00 57.62 O
ATOM 11 C2' A B2735 58.879 176.225 122.476 1.00 60.86 C
ATOM 12 O2' A B2735 58.753 175.035 123.227 1.00 63.66 O
ATOM 13 C1' A B2735 58.653 175.962 120.993 1.00 62.85 C
ATOM 14 N9 A B2735 59.703 175.278 120.228 1.00 65.44 N
ATOM 15 C8 A B2735 59.546 174.653 119.007 1.00 67.36 C
ATOM 16 N7 A B2735 60.645 174.101 118.546 1.00 66.28 N
ATOM 17 C5 A B2735 61.589 174.380 119.521 1.00 65.61 C
ATOM 18 C6 A B2735 62.948 174.069 119.626 1.00 65.99 C
ATOM 19 N6 A B2735 63.625 173.375 118.711 1.00 65.72 N
ATOM 20 N1 A B2735 63.602 174.500 120.723 1.00 67.90 N
ATOM 21 C2 A B2735 62.919 175.193 121.649 1.00 66.97 C
ATOM 22 N3 A B2735 61.643 175.543 121.667 1.00 65.17 N
ATOM 23 C4 A B2735 61.024 175.105 120.563 1.00 65.20 C
ATOM 24 P C B2736 55.294 177.352 123.583 1.00 56.93 P
ATOM 25 OP1 C B2736 54.129 176.423 123.652 1.00 55.59 O
ATOM 26 OP2 C B2736 55.128 178.680 122.936 1.00 56.08 O
ATOM 27 O5' C B2736 55.848 177.560 125.063 1.00 55.81 O
TER
ATOM 2 P A A2566 66.784 173.810 113.190 1.00 50.14 P
ATOM 3 OP1 A A2566 66.174 172.462 113.061 1.00 51.99 O
ATOM 4 OP2 A A2566 66.164 174.961 112.486 1.00 47.67 O
ATOM 5 O5' A A2566 66.859 174.189 114.737 1.00 49.80 O
ATOM 6 C5' A A2566 67.290 175.501 115.152 1.00 47.42 C
ATOM 7 C4' A A2566 66.132 176.265 115.749 1.00 47.38 C
ATOM 8 O4' A A2566 65.758 175.684 117.029 1.00 46.58 O
ATOM 9 C3' A A2566 66.417 177.714 116.094 1.00 46.19 C
ATOM 10 O3' A A2566 66.336 178.547 114.949 1.00 45.14 O
ATOM 11 C2' A A2566 65.320 178.008 117.104 1.00 46.55 C
ATOM 12 O2' A A2566 64.058 178.185 116.500 1.00 48.68 O
ATOM 13 C1' A A2566 65.303 176.706 117.902 1.00 46.09 C
ATOM 14 N9 A A2566 66.212 176.790 119.046 1.00 47.63 N
ATOM 15 C8 A A2566 67.518 176.371 119.133 1.00 47.53 C
ATOM 16 N7 A A2566 68.088 176.654 120.277 1.00 48.21 N
ATOM 17 C5 A A2566 67.088 177.294 121.000 1.00 48.98 C
ATOM 18 C6 A A2566 67.062 177.862 122.292 1.00 49.79 C
ATOM 19 N6 A A2566 68.118 177.894 123.115 1.00 48.11 N
ATOM 20 N1 A A2566 65.900 178.410 122.711 1.00 48.47 N
ATOM 21 C2 A A2566 64.849 178.394 121.883 1.00 47.69 C
ATOM 22 N3 A A2566 64.753 177.906 120.651 1.00 46.79 N
ATOM 23 C4 A A2566 65.921 177.364 120.262 1.00 47.72 C
ATOM 24 P C A2567 67.629 179.374 114.475 1.00 47.26 P
ATOM 25 OP1 C A2567 67.176 180.296 113.396 1.00 46.06 O
ATOM 26 OP2 C A2567 68.744 178.427 114.214 1.00 46.15 O
ATOM 27 O5' C A2567 68.038 180.235 115.748 1.00 46.72 O
TER
ATOM 1 O3' C B2734 60.577 181.139 120.403 1.00 53.66 O
ATOM 2 P A B2735 59.039 181.565 120.354 1.00 55.73 P
ATOM 3 OP1 A B2735 58.760 182.155 119.027 1.00 56.79 O
ATOM 4 OP2 A B2735 58.719 182.329 121.586 1.00 55.99 O
ATOM 5 O5' A B2735 58.292 180.172 120.458 1.00 55.65 O
ATOM 6 C5' A B2735 58.482 179.363 121.610 1.00 58.22 C
ATOM 7 C4' A B2735 57.756 178.062 121.462 1.00 58.46 C
ATOM 8 O4' A B2735 58.417 177.244 120.453 1.00 59.80 O
ATOM 9 C3' A B2735 57.766 177.236 122.741 1.00 59.08 C
ATOM 10 O3' A B2735 56.502 176.599 122.841 1.00 57.62 O
ATOM 11 C2' A B2735 58.879 176.225 122.476 1.00 60.86 C
ATOM 12 O2' A B2735 58.753 175.035 123.227 1.00 63.66 O
ATOM 13 C1' A B2735 58.653 175.962 120.993 1.00 62.85 C
ATOM 14 N9 A B2735 59.703 175.278 120.228 1.00 65.44 N
ATOM 15 C8 A B2735 59.546 174.653 119.007 1.00 67.36 C
ATOM 16 N7 A B2735 60.645 174.101 118.546 1.00 66.28 N
ATOM 17 C5 A B2735 61.589 174.380 119.521 1.00 65.61 C
ATOM 18 C6 A B2735 62.948 174.069 119.626 1.00 65.99 C
ATOM 19 N6 A B2735 63.625 173.375 118.711 1.00 65.72 N
ATOM 20 N1 A B2735 63.602 174.500 120.723 1.00 67.90 N
ATOM 21 C2 A B2735 62.919 175.193 121.649 1.00 66.97 C
ATOM 22 N3 A B2735 61.643 175.543 121.667 1.00 65.17 N
ATOM 23 C4 A B2735 61.024 175.105 120.563 1.00 65.20 C
ATOM 24 P C B2736 55.294 177.352 123.583 1.00 56.93 P
ATOM 25 OP1 C B2736 54.129 176.423 123.652 1.00 55.59 O
ATOM 26 OP2 C B2736 55.128 178.680 122.936 1.00 56.08 O
ATOM 27 O5' C B2736 55.848 177.560 125.063 1.00 55.81 O
TER
Atoms:
OP1: (66.174,172.462,113.061)
OP2: (66.164,174.961,112.486)
C3': (66.417,177.714,116.094)
C1': (65.303,176.706,117.902)
C5': (67.290,175.501,115.152)
O4': (65.758,175.684,117.029)
C8: (67.518,176.371,119.133)
O2': (64.058,178.185,116.500)
C6: (67.062,177.862,122.292)
C5: (67.088,177.294,121.000)
C4: (65.921,177.364,120.262)
P: (66.784,173.810,113.190)
C4': (66.132,176.265,115.749)
C2': (65.320,178.008,117.104)
C2: (64.849,178.394,121.883)
N1: (65.900,178.410,122.711)
N3: (64.753,177.906,120.651)
N6: (68.118,177.894,123.115)
N7: (68.088,176.654,120.277)
N9: (66.212,176.790,119.046)
O5': (66.859,174.189,114.737)
O3': (66.336,178.547,114.949)
OP2: (66.164,174.961,112.486)
C3': (66.417,177.714,116.094)
C1': (65.303,176.706,117.902)
C5': (67.290,175.501,115.152)
O4': (65.758,175.684,117.029)
C8: (67.518,176.371,119.133)
O2': (64.058,178.185,116.500)
C6: (67.062,177.862,122.292)
C5: (67.088,177.294,121.000)
C4: (65.921,177.364,120.262)
P: (66.784,173.810,113.190)
C4': (66.132,176.265,115.749)
C2': (65.320,178.008,117.104)
C2: (64.849,178.394,121.883)
N1: (65.900,178.410,122.711)
N3: (64.753,177.906,120.651)
N6: (68.118,177.894,123.115)
N7: (68.088,176.654,120.277)
N9: (66.212,176.790,119.046)
O5': (66.859,174.189,114.737)
O3': (66.336,178.547,114.949)
OP1: (58.760,182.155,119.027)
OP2: (58.719,182.329,121.586)
C3': (57.766,177.236,122.741)
C1': (58.653,175.962,120.993)
C5': (58.482,179.363,121.610)
O4': (58.417,177.244,120.453)
C8: (59.546,174.653,119.007)
O2': (58.753,175.035,123.227)
C6: (62.948,174.069,119.626)
C5: (61.589,174.380,119.521)
C4: (61.024,175.105,120.563)
P: (59.039,181.565,120.354)
C4': (57.756,178.062,121.462)
C2': (58.879,176.225,122.476)
C2: (62.919,175.193,121.649)
N1: (63.602,174.500,120.723)
N3: (61.643,175.543,121.667)
N6: (63.625,173.375,118.711)
N7: (60.645,174.101,118.546)
N9: (59.703,175.278,120.228)
O5': (58.292,180.172,120.458)
O3': (56.502,176.599,122.841)
OP2: (58.719,182.329,121.586)
C3': (57.766,177.236,122.741)
C1': (58.653,175.962,120.993)
C5': (58.482,179.363,121.610)
O4': (58.417,177.244,120.453)
C8: (59.546,174.653,119.007)
O2': (58.753,175.035,123.227)
C6: (62.948,174.069,119.626)
C5: (61.589,174.380,119.521)
C4: (61.024,175.105,120.563)
P: (59.039,181.565,120.354)
C4': (57.756,178.062,121.462)
C2': (58.879,176.225,122.476)
C2: (62.919,175.193,121.649)
N1: (63.602,174.500,120.723)
N3: (61.643,175.543,121.667)
N6: (63.625,173.375,118.711)
N7: (60.645,174.101,118.546)
N9: (59.703,175.278,120.228)
O5': (58.292,180.172,120.458)
O3': (56.502,176.599,122.841)
Image (generated by PyMOL):