ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A27:A29

Extra

PDB:
ATOM 1 O3' C A 26 54.645 -97.001 -49.416 1.00 31.72 O
ATOM 2 P U A 27 54.827 -96.093 -50.750 1.00 41.24 P
ATOM 3 OP1 U A 27 55.180 -96.990 -51.895 1.00 31.44 O
ATOM 4 OP2 U A 27 55.717 -94.933 -50.429 1.00 45.06 O
ATOM 5 O5' U A 27 53.376 -95.495 -51.038 1.00 37.45 O
ATOM 6 C5' U A 27 52.493 -95.095 -49.989 1.00 38.73 C
ATOM 7 C4' U A 27 52.425 -93.577 -49.870 1.00 44.81 C
ATOM 8 O4' U A 27 52.990 -93.134 -48.627 1.00 44.20 O
ATOM 9 C3' U A 27 53.019 -92.679 -50.971 1.00 52.26 C
ATOM 10 O3' U A 27 52.131 -91.965 -51.840 1.00 58.19 O
ATOM 11 C2' U A 27 53.773 -91.591 -50.197 1.00 47.23 C
ATOM 12 O2' U A 27 53.452 -90.277 -50.593 1.00 45.16 O
ATOM 13 C1' U A 27 53.320 -91.774 -48.748 1.00 48.71 C
ATOM 14 N1 U A 27 54.429 -91.474 -47.823 1.00 49.25 N
ATOM 15 C2 U A 27 54.127 -91.194 -46.501 1.00 48.98 C
ATOM 16 O2 U A 27 52.988 -91.244 -46.040 1.00 45.69 O
ATOM 17 N3 U A 27 55.220 -90.868 -45.729 1.00 47.04 N
ATOM 18 C4 U A 27 56.546 -90.813 -46.136 1.00 45.05 C
ATOM 19 O4 U A 27 57.403 -90.390 -45.367 1.00 48.31 O
ATOM 20 C5 U A 27 56.766 -91.153 -47.486 1.00 47.64 C
ATOM 21 C6 U A 27 55.739 -91.457 -48.265 1.00 50.68 C
ATOM 22 P C A 28 50.602 -92.402 -52.031 1.00 65.55 P
ATOM 23 OP1 C A 28 50.120 -93.337 -50.981 1.00 51.56 O
ATOM 24 OP2 C A 28 50.427 -92.751 -53.468 1.00 59.72 O
ATOM 25 O5' C A 28 49.836 -91.039 -51.755 1.00 67.88 O
TER

ATOM 1 O3' C B 28 48.539 -86.731 -53.439 1.00 75.29 O
ATOM 2 P G B 29 49.344 -85.627 -54.278 1.00 80.34 P
ATOM 3 OP1 G B 29 48.364 -84.737 -54.951 1.00 81.85 O
ATOM 4 OP2 G B 29 50.319 -86.397 -55.084 1.00 68.55 O
ATOM 5 O5' G B 29 50.182 -84.786 -53.210 1.00 66.10 O
ATOM 6 C5' G B 29 49.562 -83.942 -52.240 1.00 48.87 C
ATOM 7 C4' G B 29 50.595 -83.397 -51.259 1.00 53.72 C
ATOM 8 O4' G B 29 51.202 -84.470 -50.490 1.00 54.01 O
ATOM 9 C3' G B 29 51.793 -82.658 -51.838 1.00 50.03 C
ATOM 10 O3' G B 29 51.439 -81.317 -52.099 1.00 48.60 O
ATOM 11 C2' G B 29 52.790 -82.734 -50.695 1.00 49.67 C
ATOM 12 O2' G B 29 52.399 -81.835 -49.675 1.00 57.18 O
ATOM 13 C1' G B 29 52.555 -84.146 -50.174 1.00 45.60 C
ATOM 14 N9 G B 29 53.427 -85.136 -50.815 1.00 46.56 N
ATOM 15 C8 G B 29 53.011 -86.122 -51.680 1.00 48.71 C
ATOM 16 N7 G B 29 53.988 -86.857 -52.135 1.00 48.15 N
ATOM 17 C5 G B 29 55.135 -86.337 -51.536 1.00 52.52 C
ATOM 18 C6 G B 29 56.521 -86.736 -51.671 1.00 52.32 C
ATOM 19 O6 G B 29 57.001 -87.646 -52.368 1.00 55.29 O
ATOM 20 N1 G B 29 57.362 -85.947 -50.888 1.00 44.78 N
ATOM 21 C2 G B 29 56.945 -84.920 -50.077 1.00 50.09 C
ATOM 22 N2 G B 29 57.924 -84.306 -49.394 1.00 45.88 N
ATOM 23 N3 G B 29 55.659 -84.528 -49.945 1.00 53.84 N
ATOM 24 C4 G B 29 54.813 -85.277 -50.703 1.00 52.76 C
ATOM 25 P G B 30 52.281 -80.474 -53.169 1.00 60.45 P
ATOM 26 OP1 G B 30 51.755 -79.077 -53.102 1.00 61.03 O
ATOM 27 OP2 G B 30 52.272 -81.222 -54.457 1.00 48.92 O
ATOM 28 O5' G B 30 53.775 -80.463 -52.626 1.00 51.59 O
TER

Atoms:
C4: (56.546,-90.813,-46.136)
N3: (55.220,-90.868,-45.729)
OP1: (55.180,-96.990,-51.895)
OP2: (55.717,-94.933,-50.429)
C2: (54.127,-91.194,-46.501)
C1': (53.320,-91.774,-48.748)
C3': (53.019,-92.679,-50.971)
O5': (53.376,-95.495,-51.038)
O4': (52.990,-93.134,-48.627)
C5': (52.493,-95.095,-49.989)
P: (54.827,-96.093,-50.750)
C4': (52.425,-93.577,-49.870)
C2': (53.773,-91.591,-50.197)
O2': (53.452,-90.277,-50.593)
N1: (54.429,-91.474,-47.823)
O4: (57.403,-90.390,-45.367)
O2: (52.988,-91.244,-46.040)
C6: (55.739,-91.457,-48.265)
C5: (56.766,-91.153,-47.486)
O3': (52.131,-91.965,-51.840)
OP1: (48.364,-84.737,-54.951)
OP2: (50.319,-86.397,-55.084)
C3': (51.793,-82.658,-51.838)
C1': (52.555,-84.146,-50.174)
C5': (49.562,-83.942,-52.240)
O6: (57.001,-87.646,-52.368)
O4': (51.202,-84.470,-50.490)
C8: (53.011,-86.122,-51.680)
C2: (56.945,-84.920,-50.077)
C6: (56.521,-86.736,-51.671)
C5: (55.135,-86.337,-51.536)
C4: (54.813,-85.277,-50.703)
P: (49.344,-85.627,-54.278)
C4': (50.595,-83.397,-51.259)
C2': (52.790,-82.734,-50.695)
O2': (52.399,-81.835,-49.675)
N1: (57.362,-85.947,-50.888)
N2: (57.924,-84.306,-49.394)
N3: (55.659,-84.528,-49.945)
N7: (53.988,-86.857,-52.135)
N9: (53.427,-85.136,-50.815)
O5': (50.182,-84.786,-53.210)
O3': (51.439,-81.317,-52.099)
Image (generated by PyMOL):
PyMOL image
show in jmol