Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02566:02735
Extra
PDB:
ATOM 1 O3' U A2565 68.482 173.680 112.580 1.00 42.11 O
ATOM 2 P A A2566 66.937 173.742 113.029 1.00 44.51 P
ATOM 3 OP1 A A2566 66.310 172.399 112.863 1.00 45.06 O
ATOM 4 OP2 A A2566 66.336 174.927 112.353 1.00 40.24 O
ATOM 5 O5' A A2566 67.002 174.074 114.589 1.00 43.62 O
ATOM 6 C5' A A2566 67.450 175.363 115.046 1.00 42.81 C
ATOM 7 C4' A A2566 66.290 176.145 115.611 1.00 42.85 C
ATOM 8 O4' A A2566 65.912 175.592 116.901 1.00 43.61 O
ATOM 9 C3' A A2566 66.579 177.598 115.933 1.00 41.94 C
ATOM 10 O3' A A2566 66.517 178.415 114.780 1.00 40.34 O
ATOM 11 C2' A A2566 65.474 177.920 116.921 1.00 41.93 C
ATOM 12 O2' A A2566 64.228 178.092 116.286 1.00 42.97 O
ATOM 13 C1' A A2566 65.444 176.634 117.744 1.00 42.66 C
ATOM 14 N9 A A2566 66.336 176.744 118.895 1.00 44.02 N
ATOM 15 C8 A A2566 67.639 176.327 119.020 1.00 43.45 C
ATOM 16 N7 A A2566 68.179 176.622 120.177 1.00 45.04 N
ATOM 17 C5 A A2566 67.159 177.271 120.865 1.00 46.13 C
ATOM 18 C6 A A2566 67.092 177.848 122.152 1.00 47.01 C
ATOM 19 N6 A A2566 68.118 177.886 123.013 1.00 46.24 N
ATOM 20 N1 A A2566 65.917 178.402 122.526 1.00 46.78 N
ATOM 21 C2 A A2566 64.896 178.386 121.663 1.00 44.72 C
ATOM 22 N3 A A2566 64.840 177.891 120.435 1.00 43.91 N
ATOM 23 C4 A A2566 66.016 177.339 120.091 1.00 45.00 C
ATOM 24 P C A2567 67.791 179.297 114.371 1.00 40.06 P
ATOM 25 OP1 C A2567 67.337 180.242 113.321 1.00 38.71 O
ATOM 26 OP2 C A2567 68.931 178.378 114.095 1.00 40.86 O
ATOM 27 O5' C A2567 68.156 180.098 115.694 1.00 40.07 O
TER
ATOM 1 O3' C B2734 60.722 181.045 120.229 1.00 47.06 O
ATOM 2 P A B2735 59.185 181.477 120.145 1.00 49.09 P
ATOM 3 OP1 A B2735 58.936 182.083 118.812 1.00 50.77 O
ATOM 4 OP2 A B2735 58.847 182.229 121.375 1.00 48.97 O
ATOM 5 O5' A B2735 58.438 180.085 120.238 1.00 50.60 O
ATOM 6 C5' A B2735 58.655 179.257 121.374 1.00 53.42 C
ATOM 7 C4' A B2735 57.919 177.962 121.235 1.00 54.43 C
ATOM 8 O4' A B2735 58.556 177.136 120.214 1.00 56.51 O
ATOM 9 C3' A B2735 57.952 177.139 122.517 1.00 55.51 C
ATOM 10 O3' A B2735 56.685 176.506 122.649 1.00 54.76 O
ATOM 11 C2' A B2735 59.067 176.132 122.239 1.00 57.09 C
ATOM 12 O2' A B2735 58.980 174.950 123.003 1.00 56.96 O
ATOM 13 C1' A B2735 58.813 175.858 120.762 1.00 60.62 C
ATOM 14 N9 A B2735 59.841 175.162 119.976 1.00 64.56 N
ATOM 15 C8 A B2735 59.632 174.529 118.768 1.00 66.82 C
ATOM 16 N7 A B2735 60.706 173.961 118.271 1.00 66.21 N
ATOM 17 C5 A B2735 61.691 174.238 119.205 1.00 65.24 C
ATOM 18 C6 A B2735 63.052 173.913 119.256 1.00 65.21 C
ATOM 19 N6 A B2735 63.682 173.209 118.313 1.00 64.84 N
ATOM 20 N1 A B2735 63.756 174.341 120.322 1.00 65.88 N
ATOM 21 C2 A B2735 63.120 175.050 121.270 1.00 66.34 C
ATOM 22 N3 A B2735 61.846 175.419 121.337 1.00 64.28 N
ATOM 23 C4 A B2735 61.175 174.979 120.262 1.00 65.08 C
ATOM 24 P C B2736 55.505 177.264 123.429 1.00 54.07 P
ATOM 25 OP1 C B2736 54.331 176.355 123.509 1.00 54.07 O
ATOM 26 OP2 C B2736 55.342 178.608 122.813 1.00 53.56 O
ATOM 27 O5' C B2736 56.101 177.443 124.896 1.00 52.85 O
TER
ATOM 2 P A A2566 66.937 173.742 113.029 1.00 44.51 P
ATOM 3 OP1 A A2566 66.310 172.399 112.863 1.00 45.06 O
ATOM 4 OP2 A A2566 66.336 174.927 112.353 1.00 40.24 O
ATOM 5 O5' A A2566 67.002 174.074 114.589 1.00 43.62 O
ATOM 6 C5' A A2566 67.450 175.363 115.046 1.00 42.81 C
ATOM 7 C4' A A2566 66.290 176.145 115.611 1.00 42.85 C
ATOM 8 O4' A A2566 65.912 175.592 116.901 1.00 43.61 O
ATOM 9 C3' A A2566 66.579 177.598 115.933 1.00 41.94 C
ATOM 10 O3' A A2566 66.517 178.415 114.780 1.00 40.34 O
ATOM 11 C2' A A2566 65.474 177.920 116.921 1.00 41.93 C
ATOM 12 O2' A A2566 64.228 178.092 116.286 1.00 42.97 O
ATOM 13 C1' A A2566 65.444 176.634 117.744 1.00 42.66 C
ATOM 14 N9 A A2566 66.336 176.744 118.895 1.00 44.02 N
ATOM 15 C8 A A2566 67.639 176.327 119.020 1.00 43.45 C
ATOM 16 N7 A A2566 68.179 176.622 120.177 1.00 45.04 N
ATOM 17 C5 A A2566 67.159 177.271 120.865 1.00 46.13 C
ATOM 18 C6 A A2566 67.092 177.848 122.152 1.00 47.01 C
ATOM 19 N6 A A2566 68.118 177.886 123.013 1.00 46.24 N
ATOM 20 N1 A A2566 65.917 178.402 122.526 1.00 46.78 N
ATOM 21 C2 A A2566 64.896 178.386 121.663 1.00 44.72 C
ATOM 22 N3 A A2566 64.840 177.891 120.435 1.00 43.91 N
ATOM 23 C4 A A2566 66.016 177.339 120.091 1.00 45.00 C
ATOM 24 P C A2567 67.791 179.297 114.371 1.00 40.06 P
ATOM 25 OP1 C A2567 67.337 180.242 113.321 1.00 38.71 O
ATOM 26 OP2 C A2567 68.931 178.378 114.095 1.00 40.86 O
ATOM 27 O5' C A2567 68.156 180.098 115.694 1.00 40.07 O
TER
ATOM 1 O3' C B2734 60.722 181.045 120.229 1.00 47.06 O
ATOM 2 P A B2735 59.185 181.477 120.145 1.00 49.09 P
ATOM 3 OP1 A B2735 58.936 182.083 118.812 1.00 50.77 O
ATOM 4 OP2 A B2735 58.847 182.229 121.375 1.00 48.97 O
ATOM 5 O5' A B2735 58.438 180.085 120.238 1.00 50.60 O
ATOM 6 C5' A B2735 58.655 179.257 121.374 1.00 53.42 C
ATOM 7 C4' A B2735 57.919 177.962 121.235 1.00 54.43 C
ATOM 8 O4' A B2735 58.556 177.136 120.214 1.00 56.51 O
ATOM 9 C3' A B2735 57.952 177.139 122.517 1.00 55.51 C
ATOM 10 O3' A B2735 56.685 176.506 122.649 1.00 54.76 O
ATOM 11 C2' A B2735 59.067 176.132 122.239 1.00 57.09 C
ATOM 12 O2' A B2735 58.980 174.950 123.003 1.00 56.96 O
ATOM 13 C1' A B2735 58.813 175.858 120.762 1.00 60.62 C
ATOM 14 N9 A B2735 59.841 175.162 119.976 1.00 64.56 N
ATOM 15 C8 A B2735 59.632 174.529 118.768 1.00 66.82 C
ATOM 16 N7 A B2735 60.706 173.961 118.271 1.00 66.21 N
ATOM 17 C5 A B2735 61.691 174.238 119.205 1.00 65.24 C
ATOM 18 C6 A B2735 63.052 173.913 119.256 1.00 65.21 C
ATOM 19 N6 A B2735 63.682 173.209 118.313 1.00 64.84 N
ATOM 20 N1 A B2735 63.756 174.341 120.322 1.00 65.88 N
ATOM 21 C2 A B2735 63.120 175.050 121.270 1.00 66.34 C
ATOM 22 N3 A B2735 61.846 175.419 121.337 1.00 64.28 N
ATOM 23 C4 A B2735 61.175 174.979 120.262 1.00 65.08 C
ATOM 24 P C B2736 55.505 177.264 123.429 1.00 54.07 P
ATOM 25 OP1 C B2736 54.331 176.355 123.509 1.00 54.07 O
ATOM 26 OP2 C B2736 55.342 178.608 122.813 1.00 53.56 O
ATOM 27 O5' C B2736 56.101 177.443 124.896 1.00 52.85 O
TER
Atoms:
OP1: (66.310,172.399,112.863)
OP2: (66.336,174.927,112.353)
C3': (66.579,177.598,115.933)
C1': (65.444,176.634,117.744)
C5': (67.450,175.363,115.046)
O4': (65.912,175.592,116.901)
C8: (67.639,176.327,119.020)
O2': (64.228,178.092,116.286)
C6: (67.092,177.848,122.152)
C5: (67.159,177.271,120.865)
C4: (66.016,177.339,120.091)
P: (66.937,173.742,113.029)
C4': (66.290,176.145,115.611)
C2': (65.474,177.920,116.921)
C2: (64.896,178.386,121.663)
N1: (65.917,178.402,122.526)
N3: (64.840,177.891,120.435)
N6: (68.118,177.886,123.013)
N7: (68.179,176.622,120.177)
N9: (66.336,176.744,118.895)
O5': (67.002,174.074,114.589)
O3': (66.517,178.415,114.780)
OP2: (66.336,174.927,112.353)
C3': (66.579,177.598,115.933)
C1': (65.444,176.634,117.744)
C5': (67.450,175.363,115.046)
O4': (65.912,175.592,116.901)
C8: (67.639,176.327,119.020)
O2': (64.228,178.092,116.286)
C6: (67.092,177.848,122.152)
C5: (67.159,177.271,120.865)
C4: (66.016,177.339,120.091)
P: (66.937,173.742,113.029)
C4': (66.290,176.145,115.611)
C2': (65.474,177.920,116.921)
C2: (64.896,178.386,121.663)
N1: (65.917,178.402,122.526)
N3: (64.840,177.891,120.435)
N6: (68.118,177.886,123.013)
N7: (68.179,176.622,120.177)
N9: (66.336,176.744,118.895)
O5': (67.002,174.074,114.589)
O3': (66.517,178.415,114.780)
OP1: (58.936,182.083,118.812)
OP2: (58.847,182.229,121.375)
C3': (57.952,177.139,122.517)
C1': (58.813,175.858,120.762)
C5': (58.655,179.257,121.374)
O4': (58.556,177.136,120.214)
C8: (59.632,174.529,118.768)
O2': (58.980,174.950,123.003)
C6: (63.052,173.913,119.256)
C5: (61.691,174.238,119.205)
C4: (61.175,174.979,120.262)
P: (59.185,181.477,120.145)
C4': (57.919,177.962,121.235)
C2': (59.067,176.132,122.239)
C2: (63.120,175.050,121.270)
N1: (63.756,174.341,120.322)
N3: (61.846,175.419,121.337)
N6: (63.682,173.209,118.313)
N7: (60.706,173.961,118.271)
N9: (59.841,175.162,119.976)
O5': (58.438,180.085,120.238)
O3': (56.685,176.506,122.649)
OP2: (58.847,182.229,121.375)
C3': (57.952,177.139,122.517)
C1': (58.813,175.858,120.762)
C5': (58.655,179.257,121.374)
O4': (58.556,177.136,120.214)
C8: (59.632,174.529,118.768)
O2': (58.980,174.950,123.003)
C6: (63.052,173.913,119.256)
C5: (61.691,174.238,119.205)
C4: (61.175,174.979,120.262)
P: (59.185,181.477,120.145)
C4': (57.919,177.962,121.235)
C2': (59.067,176.132,122.239)
C2: (63.120,175.050,121.270)
N1: (63.756,174.341,120.322)
N3: (61.846,175.419,121.337)
N6: (63.682,173.209,118.313)
N7: (60.706,173.961,118.271)
N9: (59.841,175.162,119.976)
O5': (58.438,180.085,120.238)
O3': (56.685,176.506,122.649)
Image (generated by PyMOL):