ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:01081:01082

Extra

PDB:
ATOM 1 O3' G A1080 36.005 100.212 128.638 1.00 50.00 O
ATOM 2 P U A1081 35.836 100.875 127.179 1.00 51.60 P
ATOM 3 OP1 U A1081 35.737 99.745 126.215 1.00 49.89 O
ATOM 4 OP2 U A1081 36.867 101.927 126.985 1.00 50.51 O
ATOM 5 O5' U A1081 34.422 101.606 127.235 1.00 50.14 O
ATOM 6 C5' U A1081 33.212 100.844 127.247 1.00 50.60 C
ATOM 7 C4' U A1081 32.019 101.755 127.170 1.00 49.86 C
ATOM 8 O4' U A1081 31.937 102.585 128.362 1.00 51.35 O
ATOM 9 C3' U A1081 32.015 102.770 126.045 1.00 50.59 C
ATOM 10 O3' U A1081 31.644 102.232 124.792 1.00 53.00 O
ATOM 11 C2' U A1081 31.001 103.790 126.539 1.00 49.29 C
ATOM 12 O2' U A1081 29.667 103.377 126.313 1.00 48.64 O
ATOM 13 C1' U A1081 31.290 103.807 128.038 1.00 48.99 C
ATOM 14 N1 U A1081 32.152 104.946 128.391 1.00 47.03 N
ATOM 15 C2 U A1081 31.518 106.146 128.672 1.00 47.57 C
ATOM 16 O2 U A1081 30.309 106.264 128.685 1.00 48.08 O
ATOM 17 N3 U A1081 32.355 107.206 128.929 1.00 47.08 N
ATOM 18 C4 U A1081 33.734 107.192 128.941 1.00 45.78 C
ATOM 19 O4 U A1081 34.341 108.244 129.129 1.00 45.31 O
ATOM 20 C5 U A1081 34.322 105.913 128.672 1.00 44.44 C
ATOM 21 C6 U A1081 33.531 104.857 128.416 1.00 47.52 C
ATOM 22 P A A1082 32.219 102.904 123.448 1.00 51.69 P
ATOM 23 OP1 A A1082 32.064 104.376 123.539 1.00 49.05 O
ATOM 24 OP2 A A1082 31.625 102.167 122.298 1.00 53.41 O
ATOM 25 O5' A A1082 33.775 102.599 123.515 1.00 52.78 O
TER

ATOM 1 O3' U B1081 31.644 102.232 124.792 1.00 53.00 O
ATOM 2 P A B1082 32.219 102.904 123.448 1.00 51.69 P
ATOM 3 OP1 A B1082 32.064 104.376 123.539 1.00 49.05 O
ATOM 4 OP2 A B1082 31.625 102.167 122.298 1.00 53.41 O
ATOM 5 O5' A B1082 33.775 102.599 123.515 1.00 52.78 O
ATOM 6 C5' A B1082 34.252 101.256 123.542 1.00 54.20 C
ATOM 7 C4' A B1082 35.198 101.032 122.394 1.00 59.33 C
ATOM 8 O4' A B1082 36.230 102.056 122.395 1.00 61.09 O
ATOM 9 C3' A B1082 35.909 99.687 122.384 1.00 60.60 C
ATOM 10 O3' A B1082 36.036 99.272 121.027 1.00 62.32 O
ATOM 11 C2' A B1082 37.288 100.030 122.947 1.00 61.31 C
ATOM 12 O2' A B1082 38.285 99.158 122.470 1.00 63.08 O
ATOM 13 C1' A B1082 37.506 101.449 122.410 1.00 61.53 C
ATOM 14 N9 A B1082 38.402 102.310 123.193 1.00 61.77 N
ATOM 15 C8 A B1082 38.854 102.142 124.481 1.00 62.92 C
ATOM 16 N7 A B1082 39.615 103.122 124.908 1.00 63.85 N
ATOM 17 C5 A B1082 39.680 103.990 123.826 1.00 63.35 C
ATOM 18 C6 A B1082 40.331 105.232 123.638 1.00 63.22 C
ATOM 19 N6 A B1082 41.058 105.842 124.577 1.00 64.35 N
ATOM 20 N1 A B1082 40.200 105.834 122.437 1.00 62.32 N
ATOM 21 C2 A B1082 39.460 105.232 121.499 1.00 62.07 C
ATOM 22 N3 A B1082 38.797 104.078 121.556 1.00 62.36 N
ATOM 23 C4 A B1082 38.948 103.498 122.760 1.00 62.53 C
ATOM 24 P A B1083 34.776 98.619 120.257 1.00 63.36 P
ATOM 25 OP1 A B1083 35.005 98.908 118.814 1.00 63.66 O
ATOM 26 OP2 A B1083 33.489 99.021 120.893 1.00 64.54 O
ATOM 27 O5' A B1083 34.951 97.057 120.492 1.00 59.32 O
TER

Atoms:
C4: (33.734,107.192,128.941)
N3: (32.355,107.206,128.929)
OP1: (35.737,99.745,126.215)
OP2: (36.867,101.927,126.985)
C2: (31.518,106.146,128.672)
C1': (31.290,103.807,128.038)
C3': (32.015,102.770,126.045)
O5': (34.422,101.606,127.235)
O4': (31.937,102.585,128.362)
C5': (33.212,100.844,127.247)
P: (35.836,100.875,127.179)
C4': (32.019,101.755,127.170)
C2': (31.001,103.790,126.539)
O2': (29.667,103.377,126.313)
N1: (32.152,104.946,128.391)
O4: (34.341,108.244,129.129)
O2: (30.309,106.264,128.685)
C6: (33.531,104.857,128.416)
C5: (34.322,105.913,128.672)
O3': (31.644,102.232,124.792)
OP1: (32.064,104.376,123.539)
OP2: (31.625,102.167,122.298)
C3': (35.909,99.687,122.384)
C1': (37.506,101.449,122.410)
C5': (34.252,101.256,123.542)
O4': (36.230,102.056,122.395)
C8: (38.854,102.142,124.481)
O2': (38.285,99.158,122.470)
C6: (40.331,105.232,123.638)
C5: (39.680,103.990,123.826)
C4: (38.948,103.498,122.760)
P: (32.219,102.904,123.448)
C4': (35.198,101.032,122.394)
C2': (37.288,100.030,122.947)
C2: (39.460,105.232,121.499)
N1: (40.200,105.834,122.437)
N3: (38.797,104.078,121.556)
N6: (41.058,105.842,124.577)
N7: (39.615,103.122,124.908)
N9: (38.402,102.310,123.193)
O5': (33.775,102.599,123.515)
O3': (36.036,99.272,121.027)
Image (generated by PyMOL):
PyMOL image
show in jmol