Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02566:02735
Extra
PDB:
ATOM 1 O3' U A2565 68.365 173.946 112.696 1.00 50.66 O
ATOM 2 P A A2566 66.797 173.991 113.078 1.00 50.67 P
ATOM 3 OP1 A A2566 66.195 172.649 112.889 1.00 52.07 O
ATOM 4 OP2 A A2566 66.223 175.160 112.363 1.00 46.82 O
ATOM 5 O5' A A2566 66.775 174.327 114.637 1.00 50.38 O
ATOM 6 C5' A A2566 67.270 175.589 115.124 1.00 49.84 C
ATOM 7 C4' A A2566 66.130 176.424 115.656 1.00 49.87 C
ATOM 8 O4' A A2566 65.700 175.903 116.942 1.00 49.83 O
ATOM 9 C3' A A2566 66.468 177.873 115.960 1.00 48.85 C
ATOM 10 O3' A A2566 66.417 178.679 114.796 1.00 47.89 O
ATOM 11 C2' A A2566 65.365 178.251 116.930 1.00 49.95 C
ATOM 12 O2' A A2566 64.145 178.512 116.270 1.00 50.90 O
ATOM 13 C1' A A2566 65.263 176.974 117.766 1.00 50.53 C
ATOM 14 N9 A A2566 66.153 177.068 118.921 1.00 51.40 N
ATOM 15 C8 A A2566 67.458 176.656 119.021 1.00 51.61 C
ATOM 16 N7 A A2566 68.018 176.951 120.166 1.00 52.80 N
ATOM 17 C5 A A2566 67.009 177.587 120.877 1.00 52.59 C
ATOM 18 C6 A A2566 66.969 178.155 122.166 1.00 52.95 C
ATOM 19 N6 A A2566 68.015 178.189 123.000 1.00 52.25 N
ATOM 20 N1 A A2566 65.800 178.698 122.573 1.00 53.09 N
ATOM 21 C2 A A2566 64.755 178.670 121.737 1.00 52.16 C
ATOM 22 N3 A A2566 64.674 178.177 120.507 1.00 51.64 N
ATOM 23 C4 A A2566 65.849 177.645 120.130 1.00 52.00 C
ATOM 24 P C A2567 67.692 179.558 114.385 1.00 46.86 P
ATOM 25 OP1 C A2567 67.233 180.511 113.340 1.00 45.99 O
ATOM 26 OP2 C A2567 68.821 178.642 114.100 1.00 46.66 O
ATOM 27 O5' C A2567 68.064 180.352 115.707 1.00 46.87 O
TER
ATOM 1 O3' C B2734 60.549 181.368 120.268 1.00 51.28 O
ATOM 2 P A B2735 59.014 181.822 120.231 1.00 54.85 P
ATOM 3 OP1 A B2735 58.688 182.394 118.904 1.00 54.29 O
ATOM 4 OP2 A B2735 58.748 182.614 121.455 1.00 54.52 O
ATOM 5 O5' A B2735 58.244 180.447 120.389 1.00 55.76 O
ATOM 6 C5' A B2735 58.429 179.664 121.564 1.00 56.91 C
ATOM 7 C4' A B2735 57.727 178.352 121.426 1.00 58.07 C
ATOM 8 O4' A B2735 58.392 177.552 120.406 1.00 60.13 O
ATOM 9 C3' A B2735 57.757 177.508 122.693 1.00 59.02 C
ATOM 10 O3' A B2735 56.505 176.851 122.768 1.00 58.29 O
ATOM 11 C2' A B2735 58.866 176.499 122.397 1.00 61.10 C
ATOM 12 O2' A B2735 58.757 175.300 123.136 1.00 60.85 O
ATOM 13 C1' A B2735 58.600 176.257 120.920 1.00 63.48 C
ATOM 14 N9 A B2735 59.605 175.552 120.120 1.00 67.67 N
ATOM 15 C8 A B2735 59.374 174.943 118.903 1.00 70.82 C
ATOM 16 N7 A B2735 60.430 174.356 118.390 1.00 70.54 N
ATOM 17 C5 A B2735 61.427 174.596 119.324 1.00 69.23 C
ATOM 18 C6 A B2735 62.779 174.240 119.361 1.00 68.86 C
ATOM 19 N6 A B2735 63.389 173.544 118.397 1.00 67.95 N
ATOM 20 N1 A B2735 63.497 174.632 120.433 1.00 69.87 N
ATOM 21 C2 A B2735 62.881 175.342 121.396 1.00 69.34 C
ATOM 22 N3 A B2735 61.617 175.743 121.473 1.00 67.01 N
ATOM 23 C4 A B2735 60.933 175.334 120.396 1.00 68.21 C
ATOM 24 P C B2736 55.283 177.573 123.505 1.00 58.34 P
ATOM 25 OP1 C B2736 54.138 176.629 123.523 1.00 58.68 O
ATOM 26 OP2 C B2736 55.109 178.920 122.908 1.00 57.80 O
ATOM 27 O5' C B2736 55.815 177.743 124.998 1.00 59.68 O
TER
ATOM 2 P A A2566 66.797 173.991 113.078 1.00 50.67 P
ATOM 3 OP1 A A2566 66.195 172.649 112.889 1.00 52.07 O
ATOM 4 OP2 A A2566 66.223 175.160 112.363 1.00 46.82 O
ATOM 5 O5' A A2566 66.775 174.327 114.637 1.00 50.38 O
ATOM 6 C5' A A2566 67.270 175.589 115.124 1.00 49.84 C
ATOM 7 C4' A A2566 66.130 176.424 115.656 1.00 49.87 C
ATOM 8 O4' A A2566 65.700 175.903 116.942 1.00 49.83 O
ATOM 9 C3' A A2566 66.468 177.873 115.960 1.00 48.85 C
ATOM 10 O3' A A2566 66.417 178.679 114.796 1.00 47.89 O
ATOM 11 C2' A A2566 65.365 178.251 116.930 1.00 49.95 C
ATOM 12 O2' A A2566 64.145 178.512 116.270 1.00 50.90 O
ATOM 13 C1' A A2566 65.263 176.974 117.766 1.00 50.53 C
ATOM 14 N9 A A2566 66.153 177.068 118.921 1.00 51.40 N
ATOM 15 C8 A A2566 67.458 176.656 119.021 1.00 51.61 C
ATOM 16 N7 A A2566 68.018 176.951 120.166 1.00 52.80 N
ATOM 17 C5 A A2566 67.009 177.587 120.877 1.00 52.59 C
ATOM 18 C6 A A2566 66.969 178.155 122.166 1.00 52.95 C
ATOM 19 N6 A A2566 68.015 178.189 123.000 1.00 52.25 N
ATOM 20 N1 A A2566 65.800 178.698 122.573 1.00 53.09 N
ATOM 21 C2 A A2566 64.755 178.670 121.737 1.00 52.16 C
ATOM 22 N3 A A2566 64.674 178.177 120.507 1.00 51.64 N
ATOM 23 C4 A A2566 65.849 177.645 120.130 1.00 52.00 C
ATOM 24 P C A2567 67.692 179.558 114.385 1.00 46.86 P
ATOM 25 OP1 C A2567 67.233 180.511 113.340 1.00 45.99 O
ATOM 26 OP2 C A2567 68.821 178.642 114.100 1.00 46.66 O
ATOM 27 O5' C A2567 68.064 180.352 115.707 1.00 46.87 O
TER
ATOM 1 O3' C B2734 60.549 181.368 120.268 1.00 51.28 O
ATOM 2 P A B2735 59.014 181.822 120.231 1.00 54.85 P
ATOM 3 OP1 A B2735 58.688 182.394 118.904 1.00 54.29 O
ATOM 4 OP2 A B2735 58.748 182.614 121.455 1.00 54.52 O
ATOM 5 O5' A B2735 58.244 180.447 120.389 1.00 55.76 O
ATOM 6 C5' A B2735 58.429 179.664 121.564 1.00 56.91 C
ATOM 7 C4' A B2735 57.727 178.352 121.426 1.00 58.07 C
ATOM 8 O4' A B2735 58.392 177.552 120.406 1.00 60.13 O
ATOM 9 C3' A B2735 57.757 177.508 122.693 1.00 59.02 C
ATOM 10 O3' A B2735 56.505 176.851 122.768 1.00 58.29 O
ATOM 11 C2' A B2735 58.866 176.499 122.397 1.00 61.10 C
ATOM 12 O2' A B2735 58.757 175.300 123.136 1.00 60.85 O
ATOM 13 C1' A B2735 58.600 176.257 120.920 1.00 63.48 C
ATOM 14 N9 A B2735 59.605 175.552 120.120 1.00 67.67 N
ATOM 15 C8 A B2735 59.374 174.943 118.903 1.00 70.82 C
ATOM 16 N7 A B2735 60.430 174.356 118.390 1.00 70.54 N
ATOM 17 C5 A B2735 61.427 174.596 119.324 1.00 69.23 C
ATOM 18 C6 A B2735 62.779 174.240 119.361 1.00 68.86 C
ATOM 19 N6 A B2735 63.389 173.544 118.397 1.00 67.95 N
ATOM 20 N1 A B2735 63.497 174.632 120.433 1.00 69.87 N
ATOM 21 C2 A B2735 62.881 175.342 121.396 1.00 69.34 C
ATOM 22 N3 A B2735 61.617 175.743 121.473 1.00 67.01 N
ATOM 23 C4 A B2735 60.933 175.334 120.396 1.00 68.21 C
ATOM 24 P C B2736 55.283 177.573 123.505 1.00 58.34 P
ATOM 25 OP1 C B2736 54.138 176.629 123.523 1.00 58.68 O
ATOM 26 OP2 C B2736 55.109 178.920 122.908 1.00 57.80 O
ATOM 27 O5' C B2736 55.815 177.743 124.998 1.00 59.68 O
TER
Atoms:
OP1: (66.195,172.649,112.889)
OP2: (66.223,175.160,112.363)
C3': (66.468,177.873,115.960)
C1': (65.263,176.974,117.766)
C5': (67.270,175.589,115.124)
O4': (65.700,175.903,116.942)
C8: (67.458,176.656,119.021)
O2': (64.145,178.512,116.270)
C6: (66.969,178.155,122.166)
C5: (67.009,177.587,120.877)
C4: (65.849,177.645,120.130)
P: (66.797,173.991,113.078)
C4': (66.130,176.424,115.656)
C2': (65.365,178.251,116.930)
C2: (64.755,178.670,121.737)
N1: (65.800,178.698,122.573)
N3: (64.674,178.177,120.507)
N6: (68.015,178.189,123.000)
N7: (68.018,176.951,120.166)
N9: (66.153,177.068,118.921)
O5': (66.775,174.327,114.637)
O3': (66.417,178.679,114.796)
OP2: (66.223,175.160,112.363)
C3': (66.468,177.873,115.960)
C1': (65.263,176.974,117.766)
C5': (67.270,175.589,115.124)
O4': (65.700,175.903,116.942)
C8: (67.458,176.656,119.021)
O2': (64.145,178.512,116.270)
C6: (66.969,178.155,122.166)
C5: (67.009,177.587,120.877)
C4: (65.849,177.645,120.130)
P: (66.797,173.991,113.078)
C4': (66.130,176.424,115.656)
C2': (65.365,178.251,116.930)
C2: (64.755,178.670,121.737)
N1: (65.800,178.698,122.573)
N3: (64.674,178.177,120.507)
N6: (68.015,178.189,123.000)
N7: (68.018,176.951,120.166)
N9: (66.153,177.068,118.921)
O5': (66.775,174.327,114.637)
O3': (66.417,178.679,114.796)
OP1: (58.688,182.394,118.904)
OP2: (58.748,182.614,121.455)
C3': (57.757,177.508,122.693)
C1': (58.600,176.257,120.920)
C5': (58.429,179.664,121.564)
O4': (58.392,177.552,120.406)
C8: (59.374,174.943,118.903)
O2': (58.757,175.300,123.136)
C6: (62.779,174.240,119.361)
C5: (61.427,174.596,119.324)
C4: (60.933,175.334,120.396)
P: (59.014,181.822,120.231)
C4': (57.727,178.352,121.426)
C2': (58.866,176.499,122.397)
C2: (62.881,175.342,121.396)
N1: (63.497,174.632,120.433)
N3: (61.617,175.743,121.473)
N6: (63.389,173.544,118.397)
N7: (60.430,174.356,118.390)
N9: (59.605,175.552,120.120)
O5': (58.244,180.447,120.389)
O3': (56.505,176.851,122.768)
OP2: (58.748,182.614,121.455)
C3': (57.757,177.508,122.693)
C1': (58.600,176.257,120.920)
C5': (58.429,179.664,121.564)
O4': (58.392,177.552,120.406)
C8: (59.374,174.943,118.903)
O2': (58.757,175.300,123.136)
C6: (62.779,174.240,119.361)
C5: (61.427,174.596,119.324)
C4: (60.933,175.334,120.396)
P: (59.014,181.822,120.231)
C4': (57.727,178.352,121.426)
C2': (58.866,176.499,122.397)
C2: (62.881,175.342,121.396)
N1: (63.497,174.632,120.433)
N3: (61.617,175.743,121.473)
N6: (63.389,173.544,118.397)
N7: (60.430,174.356,118.390)
N9: (59.605,175.552,120.120)
O5': (58.244,180.447,120.389)
O3': (56.505,176.851,122.768)
Image (generated by PyMOL):