Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02566:02735
Extra
PDB:
ATOM 1 O3' U A2565 68.262 173.636 112.762 1.00 40.90 O
ATOM 2 P A A2566 66.691 173.685 113.106 1.00 40.76 P
ATOM 3 OP1 A A2566 66.091 172.343 112.922 1.00 42.85 O
ATOM 4 OP2 A A2566 66.137 174.841 112.364 1.00 38.37 O
ATOM 5 O5' A A2566 66.639 174.046 114.658 1.00 41.85 O
ATOM 6 C5' A A2566 67.088 175.329 115.128 1.00 41.93 C
ATOM 7 C4' A A2566 65.928 176.109 115.699 1.00 42.17 C
ATOM 8 O4' A A2566 65.551 175.555 116.989 1.00 42.69 O
ATOM 9 C3' A A2566 66.229 177.558 116.030 1.00 41.95 C
ATOM 10 O3' A A2566 66.191 178.388 114.884 1.00 40.52 O
ATOM 11 C2' A A2566 65.124 177.888 117.016 1.00 43.25 C
ATOM 12 O2' A A2566 63.883 178.127 116.384 1.00 44.46 O
ATOM 13 C1' A A2566 65.074 176.596 117.834 1.00 43.66 C
ATOM 14 N9 A A2566 65.946 176.690 119.007 1.00 45.52 N
ATOM 15 C8 A A2566 67.239 176.244 119.158 1.00 45.39 C
ATOM 16 N7 A A2566 67.767 176.537 120.321 1.00 45.34 N
ATOM 17 C5 A A2566 66.754 177.211 120.988 1.00 46.95 C
ATOM 18 C6 A A2566 66.685 177.797 122.270 1.00 48.27 C
ATOM 19 N6 A A2566 67.695 177.798 123.145 1.00 49.50 N
ATOM 20 N1 A A2566 65.524 178.391 122.627 1.00 48.31 N
ATOM 21 C2 A A2566 64.509 178.390 121.751 1.00 47.78 C
ATOM 22 N3 A A2566 64.454 177.879 120.523 1.00 46.56 N
ATOM 23 C4 A A2566 65.622 177.299 120.197 1.00 46.64 C
ATOM 24 P C A2567 67.506 179.197 114.451 1.00 40.39 P
ATOM 25 OP1 C A2567 67.085 180.112 113.362 1.00 40.84 O
ATOM 26 OP2 C A2567 68.614 178.234 114.216 1.00 40.60 O
ATOM 27 O5' C A2567 67.888 180.048 115.738 1.00 40.05 O
TER
ATOM 1 O3' C B2734 60.423 181.041 120.304 1.00 43.79 O
ATOM 2 P A B2735 58.867 181.404 120.289 1.00 46.77 P
ATOM 3 OP1 A B2735 58.515 181.956 118.966 1.00 47.68 O
ATOM 4 OP2 A B2735 58.535 182.165 121.520 1.00 46.63 O
ATOM 5 O5' A B2735 58.202 179.975 120.419 1.00 48.07 O
ATOM 6 C5' A B2735 58.514 179.156 121.538 1.00 48.77 C
ATOM 7 C4' A B2735 57.752 177.877 121.458 1.00 49.22 C
ATOM 8 O4' A B2735 58.347 177.030 120.439 1.00 50.06 O
ATOM 9 C3' A B2735 57.778 177.069 122.746 1.00 50.72 C
ATOM 10 O3' A B2735 56.500 176.456 122.867 1.00 51.40 O
ATOM 11 C2' A B2735 58.878 176.046 122.471 1.00 51.73 C
ATOM 12 O2' A B2735 58.775 174.877 123.259 1.00 52.58 O
ATOM 13 C1' A B2735 58.604 175.763 120.999 1.00 53.68 C
ATOM 14 N9 A B2735 59.604 175.055 120.191 1.00 56.83 N
ATOM 15 C8 A B2735 59.351 174.418 118.993 1.00 58.75 C
ATOM 16 N7 A B2735 60.398 173.826 118.472 1.00 58.16 N
ATOM 17 C5 A B2735 61.413 174.093 119.379 1.00 57.42 C
ATOM 18 C6 A B2735 62.764 173.735 119.400 1.00 56.68 C
ATOM 19 N6 A B2735 63.347 172.995 118.455 1.00 55.50 N
ATOM 20 N1 A B2735 63.506 174.164 120.439 1.00 57.33 N
ATOM 21 C2 A B2735 62.911 174.900 121.394 1.00 57.96 C
ATOM 22 N3 A B2735 61.648 175.296 121.490 1.00 56.23 N
ATOM 23 C4 A B2735 60.940 174.856 120.440 1.00 57.10 C
ATOM 24 P C B2736 55.289 177.276 123.538 1.00 52.01 P
ATOM 25 OP1 C B2736 54.089 176.398 123.552 1.00 52.88 O
ATOM 26 OP2 C B2736 55.203 178.610 122.889 1.00 51.51 O
ATOM 27 O5' C B2736 55.774 177.459 125.045 1.00 51.95 O
TER
ATOM 2 P A A2566 66.691 173.685 113.106 1.00 40.76 P
ATOM 3 OP1 A A2566 66.091 172.343 112.922 1.00 42.85 O
ATOM 4 OP2 A A2566 66.137 174.841 112.364 1.00 38.37 O
ATOM 5 O5' A A2566 66.639 174.046 114.658 1.00 41.85 O
ATOM 6 C5' A A2566 67.088 175.329 115.128 1.00 41.93 C
ATOM 7 C4' A A2566 65.928 176.109 115.699 1.00 42.17 C
ATOM 8 O4' A A2566 65.551 175.555 116.989 1.00 42.69 O
ATOM 9 C3' A A2566 66.229 177.558 116.030 1.00 41.95 C
ATOM 10 O3' A A2566 66.191 178.388 114.884 1.00 40.52 O
ATOM 11 C2' A A2566 65.124 177.888 117.016 1.00 43.25 C
ATOM 12 O2' A A2566 63.883 178.127 116.384 1.00 44.46 O
ATOM 13 C1' A A2566 65.074 176.596 117.834 1.00 43.66 C
ATOM 14 N9 A A2566 65.946 176.690 119.007 1.00 45.52 N
ATOM 15 C8 A A2566 67.239 176.244 119.158 1.00 45.39 C
ATOM 16 N7 A A2566 67.767 176.537 120.321 1.00 45.34 N
ATOM 17 C5 A A2566 66.754 177.211 120.988 1.00 46.95 C
ATOM 18 C6 A A2566 66.685 177.797 122.270 1.00 48.27 C
ATOM 19 N6 A A2566 67.695 177.798 123.145 1.00 49.50 N
ATOM 20 N1 A A2566 65.524 178.391 122.627 1.00 48.31 N
ATOM 21 C2 A A2566 64.509 178.390 121.751 1.00 47.78 C
ATOM 22 N3 A A2566 64.454 177.879 120.523 1.00 46.56 N
ATOM 23 C4 A A2566 65.622 177.299 120.197 1.00 46.64 C
ATOM 24 P C A2567 67.506 179.197 114.451 1.00 40.39 P
ATOM 25 OP1 C A2567 67.085 180.112 113.362 1.00 40.84 O
ATOM 26 OP2 C A2567 68.614 178.234 114.216 1.00 40.60 O
ATOM 27 O5' C A2567 67.888 180.048 115.738 1.00 40.05 O
TER
ATOM 1 O3' C B2734 60.423 181.041 120.304 1.00 43.79 O
ATOM 2 P A B2735 58.867 181.404 120.289 1.00 46.77 P
ATOM 3 OP1 A B2735 58.515 181.956 118.966 1.00 47.68 O
ATOM 4 OP2 A B2735 58.535 182.165 121.520 1.00 46.63 O
ATOM 5 O5' A B2735 58.202 179.975 120.419 1.00 48.07 O
ATOM 6 C5' A B2735 58.514 179.156 121.538 1.00 48.77 C
ATOM 7 C4' A B2735 57.752 177.877 121.458 1.00 49.22 C
ATOM 8 O4' A B2735 58.347 177.030 120.439 1.00 50.06 O
ATOM 9 C3' A B2735 57.778 177.069 122.746 1.00 50.72 C
ATOM 10 O3' A B2735 56.500 176.456 122.867 1.00 51.40 O
ATOM 11 C2' A B2735 58.878 176.046 122.471 1.00 51.73 C
ATOM 12 O2' A B2735 58.775 174.877 123.259 1.00 52.58 O
ATOM 13 C1' A B2735 58.604 175.763 120.999 1.00 53.68 C
ATOM 14 N9 A B2735 59.604 175.055 120.191 1.00 56.83 N
ATOM 15 C8 A B2735 59.351 174.418 118.993 1.00 58.75 C
ATOM 16 N7 A B2735 60.398 173.826 118.472 1.00 58.16 N
ATOM 17 C5 A B2735 61.413 174.093 119.379 1.00 57.42 C
ATOM 18 C6 A B2735 62.764 173.735 119.400 1.00 56.68 C
ATOM 19 N6 A B2735 63.347 172.995 118.455 1.00 55.50 N
ATOM 20 N1 A B2735 63.506 174.164 120.439 1.00 57.33 N
ATOM 21 C2 A B2735 62.911 174.900 121.394 1.00 57.96 C
ATOM 22 N3 A B2735 61.648 175.296 121.490 1.00 56.23 N
ATOM 23 C4 A B2735 60.940 174.856 120.440 1.00 57.10 C
ATOM 24 P C B2736 55.289 177.276 123.538 1.00 52.01 P
ATOM 25 OP1 C B2736 54.089 176.398 123.552 1.00 52.88 O
ATOM 26 OP2 C B2736 55.203 178.610 122.889 1.00 51.51 O
ATOM 27 O5' C B2736 55.774 177.459 125.045 1.00 51.95 O
TER
Atoms:
OP1: (66.091,172.343,112.922)
OP2: (66.137,174.841,112.364)
C3': (66.229,177.558,116.030)
C1': (65.074,176.596,117.834)
C5': (67.088,175.329,115.128)
O4': (65.551,175.555,116.989)
C8: (67.239,176.244,119.158)
O2': (63.883,178.127,116.384)
C6: (66.685,177.797,122.270)
C5: (66.754,177.211,120.988)
C4: (65.622,177.299,120.197)
P: (66.691,173.685,113.106)
C4': (65.928,176.109,115.699)
C2': (65.124,177.888,117.016)
C2: (64.509,178.390,121.751)
N1: (65.524,178.391,122.627)
N3: (64.454,177.879,120.523)
N6: (67.695,177.798,123.145)
N7: (67.767,176.537,120.321)
N9: (65.946,176.690,119.007)
O5': (66.639,174.046,114.658)
O3': (66.191,178.388,114.884)
OP2: (66.137,174.841,112.364)
C3': (66.229,177.558,116.030)
C1': (65.074,176.596,117.834)
C5': (67.088,175.329,115.128)
O4': (65.551,175.555,116.989)
C8: (67.239,176.244,119.158)
O2': (63.883,178.127,116.384)
C6: (66.685,177.797,122.270)
C5: (66.754,177.211,120.988)
C4: (65.622,177.299,120.197)
P: (66.691,173.685,113.106)
C4': (65.928,176.109,115.699)
C2': (65.124,177.888,117.016)
C2: (64.509,178.390,121.751)
N1: (65.524,178.391,122.627)
N3: (64.454,177.879,120.523)
N6: (67.695,177.798,123.145)
N7: (67.767,176.537,120.321)
N9: (65.946,176.690,119.007)
O5': (66.639,174.046,114.658)
O3': (66.191,178.388,114.884)
OP1: (58.515,181.956,118.966)
OP2: (58.535,182.165,121.520)
C3': (57.778,177.069,122.746)
C1': (58.604,175.763,120.999)
C5': (58.514,179.156,121.538)
O4': (58.347,177.030,120.439)
C8: (59.351,174.418,118.993)
O2': (58.775,174.877,123.259)
C6: (62.764,173.735,119.400)
C5: (61.413,174.093,119.379)
C4: (60.940,174.856,120.440)
P: (58.867,181.404,120.289)
C4': (57.752,177.877,121.458)
C2': (58.878,176.046,122.471)
C2: (62.911,174.900,121.394)
N1: (63.506,174.164,120.439)
N3: (61.648,175.296,121.490)
N6: (63.347,172.995,118.455)
N7: (60.398,173.826,118.472)
N9: (59.604,175.055,120.191)
O5': (58.202,179.975,120.419)
O3': (56.500,176.456,122.867)
OP2: (58.535,182.165,121.520)
C3': (57.778,177.069,122.746)
C1': (58.604,175.763,120.999)
C5': (58.514,179.156,121.538)
O4': (58.347,177.030,120.439)
C8: (59.351,174.418,118.993)
O2': (58.775,174.877,123.259)
C6: (62.764,173.735,119.400)
C5: (61.413,174.093,119.379)
C4: (60.940,174.856,120.440)
P: (58.867,181.404,120.289)
C4': (57.752,177.877,121.458)
C2': (58.878,176.046,122.471)
C2: (62.911,174.900,121.394)
N1: (63.506,174.164,120.439)
N3: (61.648,175.296,121.490)
N6: (63.347,172.995,118.455)
N7: (60.398,173.826,118.472)
N9: (59.604,175.055,120.191)
O5': (58.202,179.975,120.419)
O3': (56.500,176.456,122.867)
Image (generated by PyMOL):