Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0903:02235
Extra
PDB:
ATOM 1 O3' C A 902 54.179 85.732 87.743 1.00 38.95 O
ATOM 2 P A A 903 55.524 85.283 86.996 1.00 41.27 P
ATOM 3 OP1 A A 903 56.415 84.641 87.969 1.00 41.85 O
ATOM 4 OP2 A A 903 56.005 86.458 86.217 1.00 46.49 O
ATOM 5 O5' A A 903 55.058 84.175 85.952 1.00 44.88 O
ATOM 6 C5' A A 903 54.955 82.791 86.324 1.00 42.89 C
ATOM 7 C4' A A 903 54.976 81.924 85.086 1.00 43.59 C
ATOM 8 O4' A A 903 53.866 82.291 84.223 1.00 42.52 O
ATOM 9 C3' A A 903 56.196 82.092 84.198 1.00 42.56 C
ATOM 10 O3' A A 903 57.295 81.317 84.646 1.00 41.63 O
ATOM 11 C2' A A 903 55.681 81.623 82.848 1.00 44.58 C
ATOM 12 O2' A A 903 55.642 80.216 82.725 1.00 46.59 O
ATOM 13 C1' A A 903 54.259 82.185 82.865 1.00 42.97 C
ATOM 14 N9 A A 903 54.166 83.516 82.265 1.00 41.68 N
ATOM 15 C8 A A 903 54.037 84.713 82.917 1.00 39.80 C
ATOM 16 N7 A A 903 53.940 85.741 82.118 1.00 40.66 N
ATOM 17 C5 A A 903 54.014 85.189 80.852 1.00 39.50 C
ATOM 18 C6 A A 903 53.952 85.756 79.574 1.00 38.68 C
ATOM 19 N6 A A 903 53.755 87.059 79.353 1.00 36.78 N
ATOM 20 N1 A A 903 54.083 84.928 78.515 1.00 39.50 N
ATOM 21 C2 A A 903 54.241 83.620 78.738 1.00 38.59 C
ATOM 22 N3 A A 903 54.293 82.965 79.892 1.00 42.14 N
ATOM 23 C4 A A 903 54.171 83.819 80.926 1.00 41.16 C
ATOM 24 P U A 904 58.773 81.694 84.163 1.00 43.12 P
ATOM 25 OP1 U A 904 59.720 80.743 84.805 1.00 42.86 O
ATOM 26 OP2 U A 904 58.950 83.164 84.377 1.00 44.69 O
ATOM 27 O5' U A 904 58.753 81.414 82.591 1.00 44.12 O
TER
ATOM 1 O3' C B2234 46.915 72.716 81.192 1.00 47.73 O
ATOM 2 P A B2235 46.312 73.638 80.021 1.00 47.91 P
ATOM 3 OP1 A B2235 45.977 74.942 80.642 1.00 49.48 O
ATOM 4 OP2 A B2235 45.254 72.890 79.294 1.00 51.15 O
ATOM 5 O5' A B2235 47.545 73.822 79.034 1.00 46.46 O
ATOM 6 C5' A B2235 47.365 74.312 77.699 1.00 44.32 C
ATOM 7 C4' A B2235 48.578 75.112 77.267 1.00 43.32 C
ATOM 8 O4' A B2235 48.602 76.380 77.975 1.00 43.35 O
ATOM 9 C3' A B2235 49.942 74.471 77.504 1.00 44.83 C
ATOM 10 O3' A B2235 50.814 74.852 76.454 1.00 48.28 O
ATOM 11 C2' A B2235 50.400 75.123 78.805 1.00 43.10 C
ATOM 12 O2' A B2235 51.805 75.162 78.902 1.00 43.54 O
ATOM 13 C1' A B2235 49.836 76.533 78.650 1.00 42.57 C
ATOM 14 N9 A B2235 49.577 77.261 79.895 1.00 40.82 N
ATOM 15 C8 A B2235 48.650 76.971 80.864 1.00 42.20 C
ATOM 16 N7 A B2235 48.609 77.848 81.840 1.00 42.63 N
ATOM 17 C5 A B2235 49.586 78.771 81.498 1.00 41.86 C
ATOM 18 C6 A B2235 50.033 79.958 82.122 1.00 41.07 C
ATOM 19 N6 A B2235 49.520 80.442 83.256 1.00 39.52 N
ATOM 20 N1 A B2235 51.030 80.642 81.525 1.00 39.16 N
ATOM 21 C2 A B2235 51.527 80.171 80.373 1.00 40.85 C
ATOM 22 N3 A B2235 51.186 79.082 79.687 1.00 40.91 N
ATOM 23 C4 A B2235 50.200 78.415 80.310 1.00 41.51 C
ATOM 24 P A B2236 51.144 73.814 75.273 1.00 52.58 P
ATOM 25 OP1 A B2236 49.854 73.269 74.759 1.00 51.16 O
ATOM 26 OP2 A B2236 52.209 72.879 75.737 1.00 53.38 O
ATOM 27 O5' A B2236 51.798 74.747 74.162 1.00 53.40 O
TER
ATOM 2 P A A 903 55.524 85.283 86.996 1.00 41.27 P
ATOM 3 OP1 A A 903 56.415 84.641 87.969 1.00 41.85 O
ATOM 4 OP2 A A 903 56.005 86.458 86.217 1.00 46.49 O
ATOM 5 O5' A A 903 55.058 84.175 85.952 1.00 44.88 O
ATOM 6 C5' A A 903 54.955 82.791 86.324 1.00 42.89 C
ATOM 7 C4' A A 903 54.976 81.924 85.086 1.00 43.59 C
ATOM 8 O4' A A 903 53.866 82.291 84.223 1.00 42.52 O
ATOM 9 C3' A A 903 56.196 82.092 84.198 1.00 42.56 C
ATOM 10 O3' A A 903 57.295 81.317 84.646 1.00 41.63 O
ATOM 11 C2' A A 903 55.681 81.623 82.848 1.00 44.58 C
ATOM 12 O2' A A 903 55.642 80.216 82.725 1.00 46.59 O
ATOM 13 C1' A A 903 54.259 82.185 82.865 1.00 42.97 C
ATOM 14 N9 A A 903 54.166 83.516 82.265 1.00 41.68 N
ATOM 15 C8 A A 903 54.037 84.713 82.917 1.00 39.80 C
ATOM 16 N7 A A 903 53.940 85.741 82.118 1.00 40.66 N
ATOM 17 C5 A A 903 54.014 85.189 80.852 1.00 39.50 C
ATOM 18 C6 A A 903 53.952 85.756 79.574 1.00 38.68 C
ATOM 19 N6 A A 903 53.755 87.059 79.353 1.00 36.78 N
ATOM 20 N1 A A 903 54.083 84.928 78.515 1.00 39.50 N
ATOM 21 C2 A A 903 54.241 83.620 78.738 1.00 38.59 C
ATOM 22 N3 A A 903 54.293 82.965 79.892 1.00 42.14 N
ATOM 23 C4 A A 903 54.171 83.819 80.926 1.00 41.16 C
ATOM 24 P U A 904 58.773 81.694 84.163 1.00 43.12 P
ATOM 25 OP1 U A 904 59.720 80.743 84.805 1.00 42.86 O
ATOM 26 OP2 U A 904 58.950 83.164 84.377 1.00 44.69 O
ATOM 27 O5' U A 904 58.753 81.414 82.591 1.00 44.12 O
TER
ATOM 1 O3' C B2234 46.915 72.716 81.192 1.00 47.73 O
ATOM 2 P A B2235 46.312 73.638 80.021 1.00 47.91 P
ATOM 3 OP1 A B2235 45.977 74.942 80.642 1.00 49.48 O
ATOM 4 OP2 A B2235 45.254 72.890 79.294 1.00 51.15 O
ATOM 5 O5' A B2235 47.545 73.822 79.034 1.00 46.46 O
ATOM 6 C5' A B2235 47.365 74.312 77.699 1.00 44.32 C
ATOM 7 C4' A B2235 48.578 75.112 77.267 1.00 43.32 C
ATOM 8 O4' A B2235 48.602 76.380 77.975 1.00 43.35 O
ATOM 9 C3' A B2235 49.942 74.471 77.504 1.00 44.83 C
ATOM 10 O3' A B2235 50.814 74.852 76.454 1.00 48.28 O
ATOM 11 C2' A B2235 50.400 75.123 78.805 1.00 43.10 C
ATOM 12 O2' A B2235 51.805 75.162 78.902 1.00 43.54 O
ATOM 13 C1' A B2235 49.836 76.533 78.650 1.00 42.57 C
ATOM 14 N9 A B2235 49.577 77.261 79.895 1.00 40.82 N
ATOM 15 C8 A B2235 48.650 76.971 80.864 1.00 42.20 C
ATOM 16 N7 A B2235 48.609 77.848 81.840 1.00 42.63 N
ATOM 17 C5 A B2235 49.586 78.771 81.498 1.00 41.86 C
ATOM 18 C6 A B2235 50.033 79.958 82.122 1.00 41.07 C
ATOM 19 N6 A B2235 49.520 80.442 83.256 1.00 39.52 N
ATOM 20 N1 A B2235 51.030 80.642 81.525 1.00 39.16 N
ATOM 21 C2 A B2235 51.527 80.171 80.373 1.00 40.85 C
ATOM 22 N3 A B2235 51.186 79.082 79.687 1.00 40.91 N
ATOM 23 C4 A B2235 50.200 78.415 80.310 1.00 41.51 C
ATOM 24 P A B2236 51.144 73.814 75.273 1.00 52.58 P
ATOM 25 OP1 A B2236 49.854 73.269 74.759 1.00 51.16 O
ATOM 26 OP2 A B2236 52.209 72.879 75.737 1.00 53.38 O
ATOM 27 O5' A B2236 51.798 74.747 74.162 1.00 53.40 O
TER
Atoms:
OP1: (56.415,84.641,87.969)
OP2: (56.005,86.458,86.217)
C3': (56.196,82.092,84.198)
C1': (54.259,82.185,82.865)
C5': (54.955,82.791,86.324)
O4': (53.866,82.291,84.223)
C8: (54.037,84.713,82.917)
O2': (55.642,80.216,82.725)
C6: (53.952,85.756,79.574)
C5: (54.014,85.189,80.852)
C4: (54.171,83.819,80.926)
P: (55.524,85.283,86.996)
C4': (54.976,81.924,85.086)
C2': (55.681,81.623,82.848)
C2: (54.241,83.620,78.738)
N1: (54.083,84.928,78.515)
N3: (54.293,82.965,79.892)
N6: (53.755,87.059,79.353)
N7: (53.940,85.741,82.118)
N9: (54.166,83.516,82.265)
O5': (55.058,84.175,85.952)
O3': (57.295,81.317,84.646)
OP2: (56.005,86.458,86.217)
C3': (56.196,82.092,84.198)
C1': (54.259,82.185,82.865)
C5': (54.955,82.791,86.324)
O4': (53.866,82.291,84.223)
C8: (54.037,84.713,82.917)
O2': (55.642,80.216,82.725)
C6: (53.952,85.756,79.574)
C5: (54.014,85.189,80.852)
C4: (54.171,83.819,80.926)
P: (55.524,85.283,86.996)
C4': (54.976,81.924,85.086)
C2': (55.681,81.623,82.848)
C2: (54.241,83.620,78.738)
N1: (54.083,84.928,78.515)
N3: (54.293,82.965,79.892)
N6: (53.755,87.059,79.353)
N7: (53.940,85.741,82.118)
N9: (54.166,83.516,82.265)
O5': (55.058,84.175,85.952)
O3': (57.295,81.317,84.646)
OP1: (45.977,74.942,80.642)
OP2: (45.254,72.890,79.294)
C3': (49.942,74.471,77.504)
C1': (49.836,76.533,78.650)
C5': (47.365,74.312,77.699)
O4': (48.602,76.380,77.975)
C8: (48.650,76.971,80.864)
O2': (51.805,75.162,78.902)
C6: (50.033,79.958,82.122)
C5: (49.586,78.771,81.498)
C4: (50.200,78.415,80.310)
P: (46.312,73.638,80.021)
C4': (48.578,75.112,77.267)
C2': (50.400,75.123,78.805)
C2: (51.527,80.171,80.373)
N1: (51.030,80.642,81.525)
N3: (51.186,79.082,79.687)
N6: (49.520,80.442,83.256)
N7: (48.609,77.848,81.840)
N9: (49.577,77.261,79.895)
O5': (47.545,73.822,79.034)
O3': (50.814,74.852,76.454)
OP2: (45.254,72.890,79.294)
C3': (49.942,74.471,77.504)
C1': (49.836,76.533,78.650)
C5': (47.365,74.312,77.699)
O4': (48.602,76.380,77.975)
C8: (48.650,76.971,80.864)
O2': (51.805,75.162,78.902)
C6: (50.033,79.958,82.122)
C5: (49.586,78.771,81.498)
C4: (50.200,78.415,80.310)
P: (46.312,73.638,80.021)
C4': (48.578,75.112,77.267)
C2': (50.400,75.123,78.805)
C2: (51.527,80.171,80.373)
N1: (51.030,80.642,81.525)
N3: (51.186,79.082,79.687)
N6: (49.520,80.442,83.256)
N7: (48.609,77.848,81.840)
N9: (49.577,77.261,79.895)
O5': (47.545,73.822,79.034)
O3': (50.814,74.852,76.454)
Image (generated by PyMOL):