Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1559:A1561
Extra
PDB:
ATOM 1 O3' G A1558 4.939 -63.794 0.194 1.00124.69 O
ATOM 2 P U A1559 5.471 -62.310 -0.075 1.00148.08 P
ATOM 3 OP1 U A1559 6.923 -62.294 0.199 1.00128.66 O
ATOM 4 OP2 U A1559 4.572 -61.387 0.655 1.00116.70 O
ATOM 5 O5' U A1559 5.248 -62.120 -1.653 1.00123.35 O
ATOM 6 C5' U A1559 6.144 -62.713 -2.602 1.00104.97 C
ATOM 7 C4' U A1559 5.395 -63.264 -3.806 1.00107.76 C
ATOM 8 O4' U A1559 4.114 -63.779 -3.353 1.00114.51 O
ATOM 9 C3' U A1559 4.967 -62.279 -4.892 1.00112.27 C
ATOM 10 O3' U A1559 6.002 -61.895 -5.806 1.00111.45 O
ATOM 11 C2' U A1559 3.902 -63.098 -5.606 1.00119.92 C
ATOM 12 O2' U A1559 4.456 -64.125 -6.408 1.00125.41 O
ATOM 13 C1' U A1559 3.165 -63.679 -4.406 1.00115.68 C
ATOM 14 N1 U A1559 1.984 -62.836 -4.019 1.00109.18 N
ATOM 15 C2 U A1559 0.965 -62.696 -4.947 1.00107.30 C
ATOM 16 O2 U A1559 0.973 -63.219 -6.053 1.00106.64 O
ATOM 17 N3 U A1559 -0.087 -61.918 -4.540 1.00101.22 N
ATOM 18 C4 U A1559 -0.226 -61.273 -3.329 1.00102.33 C
ATOM 19 O4 U A1559 -1.241 -60.611 -3.122 1.00 93.01 O
ATOM 20 C5 U A1559 0.877 -61.464 -2.415 1.00105.60 C
ATOM 21 C6 U A1559 1.919 -62.221 -2.783 1.00101.30 C
ATOM 22 P G A1560 5.596 -60.921 -7.017 1.00227.35 P
ATOM 23 OP1 G A1560 5.158 -61.769 -8.142 1.00213.94 O
ATOM 24 OP2 G A1560 6.641 -59.898 -7.236 1.00201.14 O
ATOM 25 O5' G A1560 4.292 -60.209 -6.441 1.00196.15 O
TER
ATOM 1 O3' G B1560 6.060 -60.005 -3.895 1.00196.12 O
ATOM 2 P A B1561 7.627 -59.831 -4.244 1.00157.12 P
ATOM 3 OP1 A B1561 8.077 -61.122 -4.815 1.00135.87 O
ATOM 4 OP2 A B1561 8.286 -59.311 -3.020 1.00140.04 O
ATOM 5 O5' A B1561 7.748 -58.736 -5.408 1.00134.89 O
ATOM 6 C5' A B1561 8.006 -57.385 -5.061 1.00130.72 C
ATOM 7 C4' A B1561 8.010 -56.458 -6.260 1.00131.56 C
ATOM 8 O4' A B1561 6.656 -56.100 -6.655 1.00126.27 O
ATOM 9 C3' A B1561 8.646 -55.117 -5.939 1.00137.40 C
ATOM 10 O3' A B1561 10.068 -55.179 -6.070 1.00152.48 O
ATOM 11 C2' A B1561 7.895 -54.254 -6.940 1.00125.73 C
ATOM 12 O2' A B1561 8.080 -54.710 -8.267 1.00117.95 O
ATOM 13 C1' A B1561 6.504 -54.693 -6.529 1.00121.93 C
ATOM 14 N9 A B1561 6.042 -54.389 -5.157 1.00122.30 N
ATOM 15 C8 A B1561 6.777 -54.285 -4.003 1.00117.76 C
ATOM 16 N7 A B1561 6.069 -54.028 -2.927 1.00125.54 N
ATOM 17 C5 A B1561 4.765 -53.955 -3.388 1.00121.33 C
ATOM 18 C6 A B1561 3.531 -53.716 -2.745 1.00109.01 C
ATOM 19 N6 A B1561 3.411 -53.487 -1.438 1.00107.30 N
ATOM 20 N1 A B1561 2.408 -53.722 -3.489 1.00105.67 N
ATOM 21 C2 A B1561 2.520 -53.952 -4.799 1.00108.95 C
ATOM 22 N3 A B1561 3.620 -54.187 -5.517 1.00115.65 N
ATOM 23 C4 A B1561 4.729 -54.177 -4.753 1.00122.93 C
ATOM 24 P C B1562 10.967 -55.641 -4.816 1.00137.61 P
ATOM 25 OP1 C B1562 12.172 -54.792 -4.823 1.00116.94 O
ATOM 26 OP2 C B1562 11.108 -57.116 -4.853 1.00114.32 O
ATOM 27 O5' C B1562 10.095 -55.260 -3.524 1.00112.69 O
TER
ATOM 2 P U A1559 5.471 -62.310 -0.075 1.00148.08 P
ATOM 3 OP1 U A1559 6.923 -62.294 0.199 1.00128.66 O
ATOM 4 OP2 U A1559 4.572 -61.387 0.655 1.00116.70 O
ATOM 5 O5' U A1559 5.248 -62.120 -1.653 1.00123.35 O
ATOM 6 C5' U A1559 6.144 -62.713 -2.602 1.00104.97 C
ATOM 7 C4' U A1559 5.395 -63.264 -3.806 1.00107.76 C
ATOM 8 O4' U A1559 4.114 -63.779 -3.353 1.00114.51 O
ATOM 9 C3' U A1559 4.967 -62.279 -4.892 1.00112.27 C
ATOM 10 O3' U A1559 6.002 -61.895 -5.806 1.00111.45 O
ATOM 11 C2' U A1559 3.902 -63.098 -5.606 1.00119.92 C
ATOM 12 O2' U A1559 4.456 -64.125 -6.408 1.00125.41 O
ATOM 13 C1' U A1559 3.165 -63.679 -4.406 1.00115.68 C
ATOM 14 N1 U A1559 1.984 -62.836 -4.019 1.00109.18 N
ATOM 15 C2 U A1559 0.965 -62.696 -4.947 1.00107.30 C
ATOM 16 O2 U A1559 0.973 -63.219 -6.053 1.00106.64 O
ATOM 17 N3 U A1559 -0.087 -61.918 -4.540 1.00101.22 N
ATOM 18 C4 U A1559 -0.226 -61.273 -3.329 1.00102.33 C
ATOM 19 O4 U A1559 -1.241 -60.611 -3.122 1.00 93.01 O
ATOM 20 C5 U A1559 0.877 -61.464 -2.415 1.00105.60 C
ATOM 21 C6 U A1559 1.919 -62.221 -2.783 1.00101.30 C
ATOM 22 P G A1560 5.596 -60.921 -7.017 1.00227.35 P
ATOM 23 OP1 G A1560 5.158 -61.769 -8.142 1.00213.94 O
ATOM 24 OP2 G A1560 6.641 -59.898 -7.236 1.00201.14 O
ATOM 25 O5' G A1560 4.292 -60.209 -6.441 1.00196.15 O
TER
ATOM 1 O3' G B1560 6.060 -60.005 -3.895 1.00196.12 O
ATOM 2 P A B1561 7.627 -59.831 -4.244 1.00157.12 P
ATOM 3 OP1 A B1561 8.077 -61.122 -4.815 1.00135.87 O
ATOM 4 OP2 A B1561 8.286 -59.311 -3.020 1.00140.04 O
ATOM 5 O5' A B1561 7.748 -58.736 -5.408 1.00134.89 O
ATOM 6 C5' A B1561 8.006 -57.385 -5.061 1.00130.72 C
ATOM 7 C4' A B1561 8.010 -56.458 -6.260 1.00131.56 C
ATOM 8 O4' A B1561 6.656 -56.100 -6.655 1.00126.27 O
ATOM 9 C3' A B1561 8.646 -55.117 -5.939 1.00137.40 C
ATOM 10 O3' A B1561 10.068 -55.179 -6.070 1.00152.48 O
ATOM 11 C2' A B1561 7.895 -54.254 -6.940 1.00125.73 C
ATOM 12 O2' A B1561 8.080 -54.710 -8.267 1.00117.95 O
ATOM 13 C1' A B1561 6.504 -54.693 -6.529 1.00121.93 C
ATOM 14 N9 A B1561 6.042 -54.389 -5.157 1.00122.30 N
ATOM 15 C8 A B1561 6.777 -54.285 -4.003 1.00117.76 C
ATOM 16 N7 A B1561 6.069 -54.028 -2.927 1.00125.54 N
ATOM 17 C5 A B1561 4.765 -53.955 -3.388 1.00121.33 C
ATOM 18 C6 A B1561 3.531 -53.716 -2.745 1.00109.01 C
ATOM 19 N6 A B1561 3.411 -53.487 -1.438 1.00107.30 N
ATOM 20 N1 A B1561 2.408 -53.722 -3.489 1.00105.67 N
ATOM 21 C2 A B1561 2.520 -53.952 -4.799 1.00108.95 C
ATOM 22 N3 A B1561 3.620 -54.187 -5.517 1.00115.65 N
ATOM 23 C4 A B1561 4.729 -54.177 -4.753 1.00122.93 C
ATOM 24 P C B1562 10.967 -55.641 -4.816 1.00137.61 P
ATOM 25 OP1 C B1562 12.172 -54.792 -4.823 1.00116.94 O
ATOM 26 OP2 C B1562 11.108 -57.116 -4.853 1.00114.32 O
ATOM 27 O5' C B1562 10.095 -55.260 -3.524 1.00112.69 O
TER
Atoms:
C4: (-0.226,-61.273,-3.329)
N3: (-0.087,-61.918,-4.540)
OP1: (6.923,-62.294,0.199)
OP2: (4.572,-61.387,0.655)
C2: (0.965,-62.696,-4.947)
C1': (3.165,-63.679,-4.406)
C3': (4.967,-62.279,-4.892)
O5': (5.248,-62.120,-1.653)
O4': (4.114,-63.779,-3.353)
C5': (6.144,-62.713,-2.602)
P: (5.471,-62.310,-0.075)
C4': (5.395,-63.264,-3.806)
C2': (3.902,-63.098,-5.606)
O2': (4.456,-64.125,-6.408)
N1: (1.984,-62.836,-4.019)
O4: (-1.241,-60.611,-3.122)
O2: (0.973,-63.219,-6.053)
C6: (1.919,-62.221,-2.783)
C5: (0.877,-61.464,-2.415)
O3': (6.002,-61.895,-5.806)
N3: (-0.087,-61.918,-4.540)
OP1: (6.923,-62.294,0.199)
OP2: (4.572,-61.387,0.655)
C2: (0.965,-62.696,-4.947)
C1': (3.165,-63.679,-4.406)
C3': (4.967,-62.279,-4.892)
O5': (5.248,-62.120,-1.653)
O4': (4.114,-63.779,-3.353)
C5': (6.144,-62.713,-2.602)
P: (5.471,-62.310,-0.075)
C4': (5.395,-63.264,-3.806)
C2': (3.902,-63.098,-5.606)
O2': (4.456,-64.125,-6.408)
N1: (1.984,-62.836,-4.019)
O4: (-1.241,-60.611,-3.122)
O2: (0.973,-63.219,-6.053)
C6: (1.919,-62.221,-2.783)
C5: (0.877,-61.464,-2.415)
O3': (6.002,-61.895,-5.806)
OP1: (8.077,-61.122,-4.815)
OP2: (8.286,-59.311,-3.020)
C3': (8.646,-55.117,-5.939)
C1': (6.504,-54.693,-6.529)
C5': (8.006,-57.385,-5.061)
O4': (6.656,-56.100,-6.655)
C8: (6.777,-54.285,-4.003)
O2': (8.080,-54.710,-8.267)
C6: (3.531,-53.716,-2.745)
C5: (4.765,-53.955,-3.388)
C4: (4.729,-54.177,-4.753)
P: (7.627,-59.831,-4.244)
C4': (8.010,-56.458,-6.260)
C2': (7.895,-54.254,-6.940)
C2: (2.520,-53.952,-4.799)
N1: (2.408,-53.722,-3.489)
N3: (3.620,-54.187,-5.517)
N6: (3.411,-53.487,-1.438)
N7: (6.069,-54.028,-2.927)
N9: (6.042,-54.389,-5.157)
O5': (7.748,-58.736,-5.408)
O3': (10.068,-55.179,-6.070)
OP2: (8.286,-59.311,-3.020)
C3': (8.646,-55.117,-5.939)
C1': (6.504,-54.693,-6.529)
C5': (8.006,-57.385,-5.061)
O4': (6.656,-56.100,-6.655)
C8: (6.777,-54.285,-4.003)
O2': (8.080,-54.710,-8.267)
C6: (3.531,-53.716,-2.745)
C5: (4.765,-53.955,-3.388)
C4: (4.729,-54.177,-4.753)
P: (7.627,-59.831,-4.244)
C4': (8.010,-56.458,-6.260)
C2': (7.895,-54.254,-6.940)
C2: (2.520,-53.952,-4.799)
N1: (2.408,-53.722,-3.489)
N3: (3.620,-54.187,-5.517)
N6: (3.411,-53.487,-1.438)
N7: (6.069,-54.028,-2.927)
N9: (6.042,-54.389,-5.157)
O5': (7.748,-58.736,-5.408)
O3': (10.068,-55.179,-6.070)
Image (generated by PyMOL):