ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0168:01429

Extra

PDB:
ATOM 1 O3' C A 167 76.533 127.142 45.980 1.00 28.33 O
ATOM 2 P G A 168 76.464 127.689 44.473 1.00 29.50 P
ATOM 3 OP1 G A 168 76.876 129.110 44.531 1.00 28.89 O
ATOM 4 OP2 G A 168 75.159 127.337 43.874 1.00 29.82 O
ATOM 5 O5' G A 168 77.591 126.873 43.704 1.00 27.78 O
ATOM 6 C5' G A 168 78.970 127.237 43.820 1.00 30.61 C
ATOM 7 C4' G A 168 79.777 126.553 42.749 1.00 33.81 C
ATOM 8 O4' G A 168 79.660 125.115 42.916 1.00 35.53 O
ATOM 9 C3' G A 168 79.306 126.792 41.326 1.00 35.02 C
ATOM 10 O3' G A 168 79.764 128.031 40.797 1.00 36.92 O
ATOM 11 C2' G A 168 79.866 125.575 40.603 1.00 35.48 C
ATOM 12 O2' G A 168 81.251 125.667 40.356 1.00 33.86 O
ATOM 13 C1' G A 168 79.612 124.482 41.644 1.00 36.19 C
ATOM 14 N9 G A 168 78.291 123.873 41.481 1.00 37.83 N
ATOM 15 C8 G A 168 77.172 124.093 42.253 1.00 38.82 C
ATOM 16 N7 G A 168 76.123 123.436 41.837 1.00 39.04 N
ATOM 17 C5 G A 168 76.577 122.731 40.729 1.00 38.52 C
ATOM 18 C6 G A 168 75.888 121.851 39.848 1.00 38.69 C
ATOM 19 O6 G A 168 74.694 121.512 39.865 1.00 38.62 O
ATOM 20 N1 G A 168 76.732 121.360 38.857 1.00 38.00 N
ATOM 21 C2 G A 168 78.054 121.679 38.717 1.00 38.24 C
ATOM 22 N2 G A 168 78.685 121.118 37.687 1.00 38.11 N
ATOM 23 N3 G A 168 78.708 122.494 39.524 1.00 39.31 N
ATOM 24 C4 G A 168 77.914 122.982 40.502 1.00 38.36 C
ATOM 25 P G A 169 78.834 128.850 39.768 1.00 38.04 P
ATOM 26 OP1 G A 169 79.534 130.126 39.500 1.00 36.31 O
ATOM 27 OP2 G A 169 77.435 128.880 40.271 1.00 37.78 O
ATOM 28 O5' G A 169 78.874 127.955 38.453 1.00 35.12 O
TER

ATOM 1 O3' C B1428 90.340 120.207 42.375 1.00 40.95 O
ATOM 2 P A B1429 90.281 118.836 41.532 1.00 42.66 P
ATOM 3 OP1 A B1429 90.020 117.729 42.490 1.00 40.43 O
ATOM 4 OP2 A B1429 91.476 118.760 40.658 1.00 43.55 O
ATOM 5 O5' A B1429 89.020 119.034 40.582 1.00 37.24 O
ATOM 6 C5' A B1429 88.998 118.439 39.280 1.00 36.05 C
ATOM 7 C4' A B1429 87.660 118.660 38.631 1.00 36.11 C
ATOM 8 O4' A B1429 86.640 118.092 39.482 1.00 34.70 O
ATOM 9 C3' A B1429 87.220 120.104 38.450 1.00 35.63 C
ATOM 10 O3' A B1429 87.770 120.669 37.264 1.00 36.50 O
ATOM 11 C2' A B1429 85.712 119.959 38.339 1.00 33.74 C
ATOM 12 O2' A B1429 85.328 119.519 37.051 1.00 34.16 O
ATOM 13 C1' A B1429 85.447 118.840 39.349 1.00 33.47 C
ATOM 14 N9 A B1429 85.057 119.308 40.674 1.00 32.20 N
ATOM 15 C8 A B1429 85.755 119.205 41.852 1.00 33.33 C
ATOM 16 N7 A B1429 85.134 119.728 42.879 1.00 32.38 N
ATOM 17 C5 A B1429 83.950 120.204 42.341 1.00 30.99 C
ATOM 18 C6 A B1429 82.868 120.870 42.906 1.00 31.03 C
ATOM 19 N6 A B1429 82.788 121.175 44.200 1.00 32.69 N
ATOM 20 N1 A B1429 81.850 121.218 42.093 1.00 31.61 N
ATOM 21 C2 A B1429 81.929 120.903 40.800 1.00 31.61 C
ATOM 22 N3 A B1429 82.894 120.274 40.150 1.00 32.19 N
ATOM 23 C4 A B1429 83.889 119.949 40.987 1.00 31.28 C
ATOM 24 P A B1430 88.457 122.118 37.317 1.00 39.07 P
ATOM 25 OP1 A B1430 88.972 122.393 35.954 1.00 37.08 O
ATOM 26 OP2 A B1430 89.384 122.153 38.473 1.00 39.77 O
ATOM 27 O5' A B1430 87.252 123.108 37.623 1.00 34.52 O
TER

Atoms:
OP1: (76.876,129.110,44.531)
OP2: (75.159,127.337,43.874)
C3': (79.306,126.792,41.326)
C1': (79.612,124.482,41.644)
C5': (78.970,127.237,43.820)
O6: (74.694,121.512,39.865)
O4': (79.660,125.115,42.916)
C8: (77.172,124.093,42.253)
C2: (78.054,121.679,38.717)
C6: (75.888,121.851,39.848)
C5: (76.577,122.731,40.729)
C4: (77.914,122.982,40.502)
P: (76.464,127.689,44.473)
C4': (79.777,126.553,42.749)
C2': (79.866,125.575,40.603)
O2': (81.251,125.667,40.356)
N1: (76.732,121.360,38.857)
N2: (78.685,121.118,37.687)
N3: (78.708,122.494,39.524)
N7: (76.123,123.436,41.837)
N9: (78.291,123.873,41.481)
O5': (77.591,126.873,43.704)
O3': (79.764,128.031,40.797)
OP1: (90.020,117.729,42.490)
OP2: (91.476,118.760,40.658)
C3': (87.220,120.104,38.450)
C1': (85.447,118.840,39.349)
C5': (88.998,118.439,39.280)
O4': (86.640,118.092,39.482)
C8: (85.755,119.205,41.852)
O2': (85.328,119.519,37.051)
C6: (82.868,120.870,42.906)
C5: (83.950,120.204,42.341)
C4: (83.889,119.949,40.987)
P: (90.281,118.836,41.532)
C4': (87.660,118.660,38.631)
C2': (85.712,119.959,38.339)
C2: (81.929,120.903,40.800)
N1: (81.850,121.218,42.093)
N3: (82.894,120.274,40.150)
N6: (82.788,121.175,44.200)
N7: (85.134,119.728,42.879)
N9: (85.057,119.308,40.674)
O5': (89.020,119.034,40.582)
O3': (87.770,120.669,37.264)
Image (generated by PyMOL):
PyMOL image
show in jmol