Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0614:01003
Extra
PDB:
ATOM 1 O3' U A 613 50.753 104.187 90.509 1.00 29.19 O
ATOM 2 P U A 614 50.310 102.681 90.139 1.00 28.08 P
ATOM 3 OP1 U A 614 51.487 101.793 90.290 1.00 26.67 O
ATOM 4 OP2 U A 614 49.582 102.703 88.847 1.00 27.19 O
ATOM 5 O5' U A 614 49.269 102.319 91.284 1.00 27.95 O
ATOM 6 C5' U A 614 48.472 101.128 91.208 1.00 27.40 C
ATOM 7 C4' U A 614 47.829 100.860 92.542 1.00 27.22 C
ATOM 8 O4' U A 614 48.855 100.542 93.516 1.00 26.24 O
ATOM 9 C3' U A 614 47.096 102.046 93.145 1.00 26.60 C
ATOM 10 O3' U A 614 45.777 102.128 92.625 1.00 25.08 O
ATOM 11 C2' U A 614 47.100 101.710 94.629 1.00 25.66 C
ATOM 12 O2' U A 614 46.107 100.768 94.954 1.00 24.89 O
ATOM 13 C1' U A 614 48.464 101.032 94.785 1.00 26.14 C
ATOM 14 N1 U A 614 49.543 101.874 95.329 1.00 28.09 N
ATOM 15 C2 U A 614 49.608 102.018 96.706 1.00 28.90 C
ATOM 16 O2 U A 614 48.795 101.534 97.461 1.00 31.31 O
ATOM 17 N3 U A 614 50.665 102.759 97.167 1.00 29.52 N
ATOM 18 C4 U A 614 51.640 103.372 96.413 1.00 29.64 C
ATOM 19 O4 U A 614 52.553 103.966 96.986 1.00 27.39 O
ATOM 20 C5 U A 614 51.493 103.211 94.991 1.00 27.81 C
ATOM 21 C6 U A 614 50.476 102.486 94.510 1.00 28.75 C
ATOM 22 P G A 615 45.176 103.546 92.170 1.00 29.29 P
ATOM 23 OP1 G A 615 43.857 103.220 91.574 1.00 27.30 O
ATOM 24 OP2 G A 615 46.179 104.260 91.357 1.00 28.39 O
ATOM 25 O5' G A 615 44.970 104.364 93.525 1.00 24.54 O
TER
ATOM 1 O3' C B1002 54.023 94.610 84.911 1.00 33.45 O
ATOM 2 P C B1003 55.168 95.735 84.992 1.00 31.93 P
ATOM 3 OP1 C B1003 55.810 95.820 83.671 1.00 34.98 O
ATOM 4 OP2 C B1003 55.989 95.406 86.182 1.00 36.32 O
ATOM 5 O5' C B1003 54.417 97.115 85.275 1.00 30.35 O
ATOM 6 C5' C B1003 53.555 97.283 86.413 1.00 30.10 C
ATOM 7 C4' C B1003 54.338 97.743 87.638 1.00 31.79 C
ATOM 8 O4' C B1003 54.797 99.128 87.490 1.00 30.42 O
ATOM 9 C3' C B1003 53.511 97.722 88.933 1.00 30.88 C
ATOM 10 O3' C B1003 54.317 97.348 90.042 1.00 30.65 O
ATOM 11 C2' C B1003 53.133 99.185 89.106 1.00 30.16 C
ATOM 12 O2' C B1003 52.820 99.526 90.434 1.00 28.78 O
ATOM 13 C1' C B1003 54.422 99.858 88.645 1.00 31.24 C
ATOM 14 N1 C B1003 54.282 101.299 88.332 1.00 34.07 N
ATOM 15 C2 C B1003 54.794 102.240 89.251 1.00 37.13 C
ATOM 16 O2 C B1003 55.394 101.837 90.267 1.00 44.24 O
ATOM 17 N3 C B1003 54.630 103.559 89.011 1.00 34.59 N
ATOM 18 C4 C B1003 54.006 103.960 87.908 1.00 34.24 C
ATOM 19 N4 C B1003 53.875 105.268 87.718 1.00 35.70 N
ATOM 20 C5 C B1003 53.492 103.035 86.950 1.00 33.99 C
ATOM 21 C6 C B1003 53.652 101.727 87.196 1.00 34.06 C
ATOM 22 P G B1004 54.711 95.807 90.268 1.00 33.27 P
ATOM 23 OP1 G B1004 55.959 95.778 91.059 1.00 37.63 O
ATOM 24 OP2 G B1004 54.663 95.112 88.967 1.00 35.10 O
ATOM 25 O5' G B1004 53.600 95.217 91.246 1.00 34.61 O
TER
ATOM 2 P U A 614 50.310 102.681 90.139 1.00 28.08 P
ATOM 3 OP1 U A 614 51.487 101.793 90.290 1.00 26.67 O
ATOM 4 OP2 U A 614 49.582 102.703 88.847 1.00 27.19 O
ATOM 5 O5' U A 614 49.269 102.319 91.284 1.00 27.95 O
ATOM 6 C5' U A 614 48.472 101.128 91.208 1.00 27.40 C
ATOM 7 C4' U A 614 47.829 100.860 92.542 1.00 27.22 C
ATOM 8 O4' U A 614 48.855 100.542 93.516 1.00 26.24 O
ATOM 9 C3' U A 614 47.096 102.046 93.145 1.00 26.60 C
ATOM 10 O3' U A 614 45.777 102.128 92.625 1.00 25.08 O
ATOM 11 C2' U A 614 47.100 101.710 94.629 1.00 25.66 C
ATOM 12 O2' U A 614 46.107 100.768 94.954 1.00 24.89 O
ATOM 13 C1' U A 614 48.464 101.032 94.785 1.00 26.14 C
ATOM 14 N1 U A 614 49.543 101.874 95.329 1.00 28.09 N
ATOM 15 C2 U A 614 49.608 102.018 96.706 1.00 28.90 C
ATOM 16 O2 U A 614 48.795 101.534 97.461 1.00 31.31 O
ATOM 17 N3 U A 614 50.665 102.759 97.167 1.00 29.52 N
ATOM 18 C4 U A 614 51.640 103.372 96.413 1.00 29.64 C
ATOM 19 O4 U A 614 52.553 103.966 96.986 1.00 27.39 O
ATOM 20 C5 U A 614 51.493 103.211 94.991 1.00 27.81 C
ATOM 21 C6 U A 614 50.476 102.486 94.510 1.00 28.75 C
ATOM 22 P G A 615 45.176 103.546 92.170 1.00 29.29 P
ATOM 23 OP1 G A 615 43.857 103.220 91.574 1.00 27.30 O
ATOM 24 OP2 G A 615 46.179 104.260 91.357 1.00 28.39 O
ATOM 25 O5' G A 615 44.970 104.364 93.525 1.00 24.54 O
TER
ATOM 1 O3' C B1002 54.023 94.610 84.911 1.00 33.45 O
ATOM 2 P C B1003 55.168 95.735 84.992 1.00 31.93 P
ATOM 3 OP1 C B1003 55.810 95.820 83.671 1.00 34.98 O
ATOM 4 OP2 C B1003 55.989 95.406 86.182 1.00 36.32 O
ATOM 5 O5' C B1003 54.417 97.115 85.275 1.00 30.35 O
ATOM 6 C5' C B1003 53.555 97.283 86.413 1.00 30.10 C
ATOM 7 C4' C B1003 54.338 97.743 87.638 1.00 31.79 C
ATOM 8 O4' C B1003 54.797 99.128 87.490 1.00 30.42 O
ATOM 9 C3' C B1003 53.511 97.722 88.933 1.00 30.88 C
ATOM 10 O3' C B1003 54.317 97.348 90.042 1.00 30.65 O
ATOM 11 C2' C B1003 53.133 99.185 89.106 1.00 30.16 C
ATOM 12 O2' C B1003 52.820 99.526 90.434 1.00 28.78 O
ATOM 13 C1' C B1003 54.422 99.858 88.645 1.00 31.24 C
ATOM 14 N1 C B1003 54.282 101.299 88.332 1.00 34.07 N
ATOM 15 C2 C B1003 54.794 102.240 89.251 1.00 37.13 C
ATOM 16 O2 C B1003 55.394 101.837 90.267 1.00 44.24 O
ATOM 17 N3 C B1003 54.630 103.559 89.011 1.00 34.59 N
ATOM 18 C4 C B1003 54.006 103.960 87.908 1.00 34.24 C
ATOM 19 N4 C B1003 53.875 105.268 87.718 1.00 35.70 N
ATOM 20 C5 C B1003 53.492 103.035 86.950 1.00 33.99 C
ATOM 21 C6 C B1003 53.652 101.727 87.196 1.00 34.06 C
ATOM 22 P G B1004 54.711 95.807 90.268 1.00 33.27 P
ATOM 23 OP1 G B1004 55.959 95.778 91.059 1.00 37.63 O
ATOM 24 OP2 G B1004 54.663 95.112 88.967 1.00 35.10 O
ATOM 25 O5' G B1004 53.600 95.217 91.246 1.00 34.61 O
TER
Atoms:
C4: (51.640,103.372,96.413)
N3: (50.665,102.759,97.167)
OP1: (51.487,101.793,90.290)
OP2: (49.582,102.703,88.847)
C2: (49.608,102.018,96.706)
C1': (48.464,101.032,94.785)
C3': (47.096,102.046,93.145)
O5': (49.269,102.319,91.284)
O4': (48.855,100.542,93.516)
C5': (48.472,101.128,91.208)
P: (50.310,102.681,90.139)
C4': (47.829,100.860,92.542)
C2': (47.100,101.710,94.629)
O2': (46.107,100.768,94.954)
N1: (49.543,101.874,95.329)
O4: (52.553,103.966,96.986)
O2: (48.795,101.534,97.461)
C6: (50.476,102.486,94.510)
C5: (51.493,103.211,94.991)
O3': (45.777,102.128,92.625)
N3: (50.665,102.759,97.167)
OP1: (51.487,101.793,90.290)
OP2: (49.582,102.703,88.847)
C2: (49.608,102.018,96.706)
C1': (48.464,101.032,94.785)
C3': (47.096,102.046,93.145)
O5': (49.269,102.319,91.284)
O4': (48.855,100.542,93.516)
C5': (48.472,101.128,91.208)
P: (50.310,102.681,90.139)
C4': (47.829,100.860,92.542)
C2': (47.100,101.710,94.629)
O2': (46.107,100.768,94.954)
N1: (49.543,101.874,95.329)
O4: (52.553,103.966,96.986)
O2: (48.795,101.534,97.461)
C6: (50.476,102.486,94.510)
C5: (51.493,103.211,94.991)
O3': (45.777,102.128,92.625)
C2: (54.794,102.240,89.251)
OP1: (55.810,95.820,83.671)
OP2: (55.989,95.406,86.182)
C4: (54.006,103.960,87.908)
O5': (54.417,97.115,85.275)
C3': (53.511,97.722,88.933)
C1': (54.422,99.858,88.645)
O4': (54.797,99.128,87.490)
C5': (53.555,97.283,86.413)
P: (55.168,95.735,84.992)
O2: (55.394,101.837,90.267)
C4': (54.338,97.743,87.638)
C2': (53.133,99.185,89.106)
O2': (52.820,99.526,90.434)
N1: (54.282,101.299,88.332)
N3: (54.630,103.559,89.011)
N4: (53.875,105.268,87.718)
C6: (53.652,101.727,87.196)
C5: (53.492,103.035,86.950)
O3': (54.317,97.348,90.042)
OP1: (55.810,95.820,83.671)
OP2: (55.989,95.406,86.182)
C4: (54.006,103.960,87.908)
O5': (54.417,97.115,85.275)
C3': (53.511,97.722,88.933)
C1': (54.422,99.858,88.645)
O4': (54.797,99.128,87.490)
C5': (53.555,97.283,86.413)
P: (55.168,95.735,84.992)
O2: (55.394,101.837,90.267)
C4': (54.338,97.743,87.638)
C2': (53.133,99.185,89.106)
O2': (52.820,99.526,90.434)
N1: (54.282,101.299,88.332)
N3: (54.630,103.559,89.011)
N4: (53.875,105.268,87.718)
C6: (53.652,101.727,87.196)
C5: (53.492,103.035,86.950)
O3': (54.317,97.348,90.042)
Image (generated by PyMOL):