Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0614:01003
Extra
PDB:
ATOM 1 O3' U A 613 50.987 104.349 90.763 1.00 34.46 O
ATOM 2 P U A 614 50.518 102.842 90.460 1.00 34.19 P
ATOM 3 OP1 U A 614 51.668 101.944 90.709 1.00 34.01 O
ATOM 4 OP2 U A 614 49.847 102.808 89.145 1.00 34.00 O
ATOM 5 O5' U A 614 49.414 102.555 91.568 1.00 33.20 O
ATOM 6 C5' U A 614 48.621 101.368 91.518 1.00 33.64 C
ATOM 7 C4' U A 614 48.083 101.048 92.884 1.00 35.03 C
ATOM 8 O4' U A 614 49.167 100.709 93.786 1.00 35.88 O
ATOM 9 C3' U A 614 47.358 102.184 93.577 1.00 35.58 C
ATOM 10 O3' U A 614 46.010 102.246 93.131 1.00 32.65 O
ATOM 11 C2' U A 614 47.436 101.764 95.038 1.00 37.81 C
ATOM 12 O2' U A 614 46.441 100.800 95.321 1.00 38.26 O
ATOM 13 C1' U A 614 48.831 101.119 95.104 1.00 38.17 C
ATOM 14 N1 U A 614 49.905 101.997 95.608 1.00 40.55 N
ATOM 15 C2 U A 614 49.985 102.231 96.979 1.00 41.20 C
ATOM 16 O2 U A 614 49.213 101.761 97.774 1.00 45.26 O
ATOM 17 N3 U A 614 51.011 103.046 97.375 1.00 41.24 N
ATOM 18 C4 U A 614 51.949 103.650 96.564 1.00 44.56 C
ATOM 19 O4 U A 614 52.801 104.380 97.066 1.00 47.06 O
ATOM 20 C5 U A 614 51.806 103.372 95.168 1.00 44.25 C
ATOM 21 C6 U A 614 50.816 102.575 94.748 1.00 43.34 C
ATOM 22 P G A 615 45.419 103.622 92.559 1.00 33.82 P
ATOM 23 OP1 G A 615 44.126 103.289 91.942 1.00 35.46 O
ATOM 24 OP2 G A 615 46.447 104.295 91.753 1.00 33.17 O
ATOM 25 O5' G A 615 45.132 104.492 93.860 1.00 32.05 O
TER
ATOM 1 O3' C B1002 54.267 94.764 85.219 1.00 40.87 O
ATOM 2 P C B1003 55.351 95.940 85.332 1.00 41.76 P
ATOM 3 OP1 C B1003 56.052 96.083 84.042 1.00 44.77 O
ATOM 4 OP2 C B1003 56.128 95.613 86.556 1.00 43.73 O
ATOM 5 O5' C B1003 54.530 97.288 85.603 1.00 41.92 O
ATOM 6 C5' C B1003 53.711 97.460 86.795 1.00 40.85 C
ATOM 7 C4' C B1003 54.549 97.914 87.990 1.00 40.22 C
ATOM 8 O4' C B1003 54.974 99.306 87.840 1.00 40.00 O
ATOM 9 C3' C B1003 53.816 97.860 89.335 1.00 38.88 C
ATOM 10 O3' C B1003 54.723 97.451 90.349 1.00 38.87 O
ATOM 11 C2' C B1003 53.430 99.315 89.569 1.00 38.23 C
ATOM 12 O2' C B1003 53.247 99.645 90.927 1.00 38.79 O
ATOM 13 C1' C B1003 54.664 100.012 89.025 1.00 38.63 C
ATOM 14 N1 C B1003 54.511 101.460 88.754 1.00 40.46 N
ATOM 15 C2 C B1003 54.941 102.370 89.746 1.00 42.96 C
ATOM 16 O2 C B1003 55.426 101.927 90.809 1.00 49.21 O
ATOM 17 N3 C B1003 54.821 103.701 89.528 1.00 39.04 N
ATOM 18 C4 C B1003 54.303 104.140 88.387 1.00 37.95 C
ATOM 19 N4 C B1003 54.212 105.460 88.222 1.00 37.09 N
ATOM 20 C5 C B1003 53.854 103.246 87.365 1.00 38.15 C
ATOM 21 C6 C B1003 53.973 101.926 87.588 1.00 38.34 C
ATOM 22 P G B1004 55.015 95.888 90.574 1.00 40.64 P
ATOM 23 OP1 G B1004 56.379 95.748 91.127 1.00 43.78 O
ATOM 24 OP2 G B1004 54.663 95.163 89.333 1.00 41.66 O
ATOM 25 O5' G B1004 53.984 95.449 91.702 1.00 41.35 O
TER
ATOM 2 P U A 614 50.518 102.842 90.460 1.00 34.19 P
ATOM 3 OP1 U A 614 51.668 101.944 90.709 1.00 34.01 O
ATOM 4 OP2 U A 614 49.847 102.808 89.145 1.00 34.00 O
ATOM 5 O5' U A 614 49.414 102.555 91.568 1.00 33.20 O
ATOM 6 C5' U A 614 48.621 101.368 91.518 1.00 33.64 C
ATOM 7 C4' U A 614 48.083 101.048 92.884 1.00 35.03 C
ATOM 8 O4' U A 614 49.167 100.709 93.786 1.00 35.88 O
ATOM 9 C3' U A 614 47.358 102.184 93.577 1.00 35.58 C
ATOM 10 O3' U A 614 46.010 102.246 93.131 1.00 32.65 O
ATOM 11 C2' U A 614 47.436 101.764 95.038 1.00 37.81 C
ATOM 12 O2' U A 614 46.441 100.800 95.321 1.00 38.26 O
ATOM 13 C1' U A 614 48.831 101.119 95.104 1.00 38.17 C
ATOM 14 N1 U A 614 49.905 101.997 95.608 1.00 40.55 N
ATOM 15 C2 U A 614 49.985 102.231 96.979 1.00 41.20 C
ATOM 16 O2 U A 614 49.213 101.761 97.774 1.00 45.26 O
ATOM 17 N3 U A 614 51.011 103.046 97.375 1.00 41.24 N
ATOM 18 C4 U A 614 51.949 103.650 96.564 1.00 44.56 C
ATOM 19 O4 U A 614 52.801 104.380 97.066 1.00 47.06 O
ATOM 20 C5 U A 614 51.806 103.372 95.168 1.00 44.25 C
ATOM 21 C6 U A 614 50.816 102.575 94.748 1.00 43.34 C
ATOM 22 P G A 615 45.419 103.622 92.559 1.00 33.82 P
ATOM 23 OP1 G A 615 44.126 103.289 91.942 1.00 35.46 O
ATOM 24 OP2 G A 615 46.447 104.295 91.753 1.00 33.17 O
ATOM 25 O5' G A 615 45.132 104.492 93.860 1.00 32.05 O
TER
ATOM 1 O3' C B1002 54.267 94.764 85.219 1.00 40.87 O
ATOM 2 P C B1003 55.351 95.940 85.332 1.00 41.76 P
ATOM 3 OP1 C B1003 56.052 96.083 84.042 1.00 44.77 O
ATOM 4 OP2 C B1003 56.128 95.613 86.556 1.00 43.73 O
ATOM 5 O5' C B1003 54.530 97.288 85.603 1.00 41.92 O
ATOM 6 C5' C B1003 53.711 97.460 86.795 1.00 40.85 C
ATOM 7 C4' C B1003 54.549 97.914 87.990 1.00 40.22 C
ATOM 8 O4' C B1003 54.974 99.306 87.840 1.00 40.00 O
ATOM 9 C3' C B1003 53.816 97.860 89.335 1.00 38.88 C
ATOM 10 O3' C B1003 54.723 97.451 90.349 1.00 38.87 O
ATOM 11 C2' C B1003 53.430 99.315 89.569 1.00 38.23 C
ATOM 12 O2' C B1003 53.247 99.645 90.927 1.00 38.79 O
ATOM 13 C1' C B1003 54.664 100.012 89.025 1.00 38.63 C
ATOM 14 N1 C B1003 54.511 101.460 88.754 1.00 40.46 N
ATOM 15 C2 C B1003 54.941 102.370 89.746 1.00 42.96 C
ATOM 16 O2 C B1003 55.426 101.927 90.809 1.00 49.21 O
ATOM 17 N3 C B1003 54.821 103.701 89.528 1.00 39.04 N
ATOM 18 C4 C B1003 54.303 104.140 88.387 1.00 37.95 C
ATOM 19 N4 C B1003 54.212 105.460 88.222 1.00 37.09 N
ATOM 20 C5 C B1003 53.854 103.246 87.365 1.00 38.15 C
ATOM 21 C6 C B1003 53.973 101.926 87.588 1.00 38.34 C
ATOM 22 P G B1004 55.015 95.888 90.574 1.00 40.64 P
ATOM 23 OP1 G B1004 56.379 95.748 91.127 1.00 43.78 O
ATOM 24 OP2 G B1004 54.663 95.163 89.333 1.00 41.66 O
ATOM 25 O5' G B1004 53.984 95.449 91.702 1.00 41.35 O
TER
Atoms:
C4: (51.949,103.650,96.564)
N3: (51.011,103.046,97.375)
OP1: (51.668,101.944,90.709)
OP2: (49.847,102.808,89.145)
C2: (49.985,102.231,96.979)
C1': (48.831,101.119,95.104)
C3': (47.358,102.184,93.577)
O5': (49.414,102.555,91.568)
O4': (49.167,100.709,93.786)
C5': (48.621,101.368,91.518)
P: (50.518,102.842,90.460)
C4': (48.083,101.048,92.884)
C2': (47.436,101.764,95.038)
O2': (46.441,100.800,95.321)
N1: (49.905,101.997,95.608)
O4: (52.801,104.380,97.066)
O2: (49.213,101.761,97.774)
C6: (50.816,102.575,94.748)
C5: (51.806,103.372,95.168)
O3': (46.010,102.246,93.131)
N3: (51.011,103.046,97.375)
OP1: (51.668,101.944,90.709)
OP2: (49.847,102.808,89.145)
C2: (49.985,102.231,96.979)
C1': (48.831,101.119,95.104)
C3': (47.358,102.184,93.577)
O5': (49.414,102.555,91.568)
O4': (49.167,100.709,93.786)
C5': (48.621,101.368,91.518)
P: (50.518,102.842,90.460)
C4': (48.083,101.048,92.884)
C2': (47.436,101.764,95.038)
O2': (46.441,100.800,95.321)
N1: (49.905,101.997,95.608)
O4: (52.801,104.380,97.066)
O2: (49.213,101.761,97.774)
C6: (50.816,102.575,94.748)
C5: (51.806,103.372,95.168)
O3': (46.010,102.246,93.131)
C2: (54.941,102.370,89.746)
OP1: (56.052,96.083,84.042)
OP2: (56.128,95.613,86.556)
C4: (54.303,104.140,88.387)
O5': (54.530,97.288,85.603)
C3': (53.816,97.860,89.335)
C1': (54.664,100.012,89.025)
O4': (54.974,99.306,87.840)
C5': (53.711,97.460,86.795)
P: (55.351,95.940,85.332)
O2: (55.426,101.927,90.809)
C4': (54.549,97.914,87.990)
C2': (53.430,99.315,89.569)
O2': (53.247,99.645,90.927)
N1: (54.511,101.460,88.754)
N3: (54.821,103.701,89.528)
N4: (54.212,105.460,88.222)
C6: (53.973,101.926,87.588)
C5: (53.854,103.246,87.365)
O3': (54.723,97.451,90.349)
OP1: (56.052,96.083,84.042)
OP2: (56.128,95.613,86.556)
C4: (54.303,104.140,88.387)
O5': (54.530,97.288,85.603)
C3': (53.816,97.860,89.335)
C1': (54.664,100.012,89.025)
O4': (54.974,99.306,87.840)
C5': (53.711,97.460,86.795)
P: (55.351,95.940,85.332)
O2: (55.426,101.927,90.809)
C4': (54.549,97.914,87.990)
C2': (53.430,99.315,89.569)
O2': (53.247,99.645,90.927)
N1: (54.511,101.460,88.754)
N3: (54.821,103.701,89.528)
N4: (54.212,105.460,88.222)
C6: (53.973,101.926,87.588)
C5: (53.854,103.246,87.365)
O3': (54.723,97.451,90.349)
Image (generated by PyMOL):