Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0614:01003
Extra
PDB:
ATOM 1 O3' U A 613 50.761 104.141 90.450 1.00 32.60 O
ATOM 2 P U A 614 50.304 102.645 90.085 1.00 31.95 P
ATOM 3 OP1 U A 614 51.481 101.756 90.154 1.00 30.74 O
ATOM 4 OP2 U A 614 49.527 102.727 88.832 1.00 31.02 O
ATOM 5 O5' U A 614 49.321 102.249 91.273 1.00 32.90 O
ATOM 6 C5' U A 614 48.535 101.045 91.219 1.00 32.25 C
ATOM 7 C4' U A 614 47.902 100.777 92.563 1.00 32.72 C
ATOM 8 O4' U A 614 48.936 100.462 93.524 1.00 33.70 O
ATOM 9 C3' U A 614 47.149 101.937 93.190 1.00 32.79 C
ATOM 10 O3' U A 614 45.817 102.010 92.694 1.00 31.94 O
ATOM 11 C2' U A 614 47.181 101.584 94.670 1.00 33.67 C
ATOM 12 O2' U A 614 46.223 100.608 95.004 1.00 35.01 O
ATOM 13 C1' U A 614 48.564 100.947 94.802 1.00 34.44 C
ATOM 14 N1 U A 614 49.627 101.839 95.293 1.00 35.84 N
ATOM 15 C2 U A 614 49.739 102.032 96.660 1.00 35.45 C
ATOM 16 O2 U A 614 48.970 101.552 97.465 1.00 36.78 O
ATOM 17 N3 U A 614 50.788 102.815 97.048 1.00 35.88 N
ATOM 18 C4 U A 614 51.715 103.420 96.233 1.00 37.82 C
ATOM 19 O4 U A 614 52.629 104.066 96.738 1.00 39.37 O
ATOM 20 C5 U A 614 51.517 103.204 94.836 1.00 36.70 C
ATOM 21 C6 U A 614 50.504 102.445 94.423 1.00 36.29 C
ATOM 22 P G A 615 45.234 103.415 92.186 1.00 32.76 P
ATOM 23 OP1 G A 615 43.932 103.174 91.533 1.00 33.39 O
ATOM 24 OP2 G A 615 46.299 104.099 91.434 1.00 34.92 O
ATOM 25 O5' G A 615 44.985 104.239 93.520 1.00 30.94 O
TER
ATOM 1 O3' C B1002 53.984 94.697 84.848 1.00 32.69 O
ATOM 2 P C B1003 55.186 95.754 84.926 1.00 34.22 P
ATOM 3 OP1 C B1003 55.869 95.835 83.616 1.00 36.14 O
ATOM 4 OP2 C B1003 55.954 95.356 86.130 1.00 35.41 O
ATOM 5 O5' C B1003 54.504 97.172 85.203 1.00 35.01 O
ATOM 6 C5' C B1003 53.602 97.367 86.313 1.00 36.24 C
ATOM 7 C4' C B1003 54.361 97.772 87.567 1.00 36.18 C
ATOM 8 O4' C B1003 54.839 99.148 87.465 1.00 35.62 O
ATOM 9 C3' C B1003 53.534 97.718 88.853 1.00 34.87 C
ATOM 10 O3' C B1003 54.373 97.312 89.929 1.00 35.54 O
ATOM 11 C2' C B1003 53.132 99.172 89.052 1.00 33.69 C
ATOM 12 O2' C B1003 52.850 99.473 90.398 1.00 32.65 O
ATOM 13 C1' C B1003 54.404 99.876 88.599 1.00 35.67 C
ATOM 14 N1 C B1003 54.274 101.315 88.265 1.00 37.20 N
ATOM 15 C2 C B1003 54.725 102.279 89.204 1.00 37.87 C
ATOM 16 O2 C B1003 55.235 101.903 90.271 1.00 40.88 O
ATOM 17 N3 C B1003 54.596 103.587 88.921 1.00 36.95 N
ATOM 18 C4 C B1003 54.054 103.967 87.767 1.00 38.83 C
ATOM 19 N4 C B1003 53.937 105.276 87.542 1.00 41.14 N
ATOM 20 C5 C B1003 53.602 103.023 86.791 1.00 37.15 C
ATOM 21 C6 C B1003 53.727 101.722 87.079 1.00 36.60 C
ATOM 22 P G B1004 54.736 95.757 90.118 1.00 38.50 P
ATOM 23 OP1 G B1004 56.106 95.680 90.656 1.00 40.96 O
ATOM 24 OP2 G B1004 54.404 95.035 88.865 1.00 38.29 O
ATOM 25 O5' G B1004 53.761 95.239 91.265 1.00 37.77 O
TER
ATOM 2 P U A 614 50.304 102.645 90.085 1.00 31.95 P
ATOM 3 OP1 U A 614 51.481 101.756 90.154 1.00 30.74 O
ATOM 4 OP2 U A 614 49.527 102.727 88.832 1.00 31.02 O
ATOM 5 O5' U A 614 49.321 102.249 91.273 1.00 32.90 O
ATOM 6 C5' U A 614 48.535 101.045 91.219 1.00 32.25 C
ATOM 7 C4' U A 614 47.902 100.777 92.563 1.00 32.72 C
ATOM 8 O4' U A 614 48.936 100.462 93.524 1.00 33.70 O
ATOM 9 C3' U A 614 47.149 101.937 93.190 1.00 32.79 C
ATOM 10 O3' U A 614 45.817 102.010 92.694 1.00 31.94 O
ATOM 11 C2' U A 614 47.181 101.584 94.670 1.00 33.67 C
ATOM 12 O2' U A 614 46.223 100.608 95.004 1.00 35.01 O
ATOM 13 C1' U A 614 48.564 100.947 94.802 1.00 34.44 C
ATOM 14 N1 U A 614 49.627 101.839 95.293 1.00 35.84 N
ATOM 15 C2 U A 614 49.739 102.032 96.660 1.00 35.45 C
ATOM 16 O2 U A 614 48.970 101.552 97.465 1.00 36.78 O
ATOM 17 N3 U A 614 50.788 102.815 97.048 1.00 35.88 N
ATOM 18 C4 U A 614 51.715 103.420 96.233 1.00 37.82 C
ATOM 19 O4 U A 614 52.629 104.066 96.738 1.00 39.37 O
ATOM 20 C5 U A 614 51.517 103.204 94.836 1.00 36.70 C
ATOM 21 C6 U A 614 50.504 102.445 94.423 1.00 36.29 C
ATOM 22 P G A 615 45.234 103.415 92.186 1.00 32.76 P
ATOM 23 OP1 G A 615 43.932 103.174 91.533 1.00 33.39 O
ATOM 24 OP2 G A 615 46.299 104.099 91.434 1.00 34.92 O
ATOM 25 O5' G A 615 44.985 104.239 93.520 1.00 30.94 O
TER
ATOM 1 O3' C B1002 53.984 94.697 84.848 1.00 32.69 O
ATOM 2 P C B1003 55.186 95.754 84.926 1.00 34.22 P
ATOM 3 OP1 C B1003 55.869 95.835 83.616 1.00 36.14 O
ATOM 4 OP2 C B1003 55.954 95.356 86.130 1.00 35.41 O
ATOM 5 O5' C B1003 54.504 97.172 85.203 1.00 35.01 O
ATOM 6 C5' C B1003 53.602 97.367 86.313 1.00 36.24 C
ATOM 7 C4' C B1003 54.361 97.772 87.567 1.00 36.18 C
ATOM 8 O4' C B1003 54.839 99.148 87.465 1.00 35.62 O
ATOM 9 C3' C B1003 53.534 97.718 88.853 1.00 34.87 C
ATOM 10 O3' C B1003 54.373 97.312 89.929 1.00 35.54 O
ATOM 11 C2' C B1003 53.132 99.172 89.052 1.00 33.69 C
ATOM 12 O2' C B1003 52.850 99.473 90.398 1.00 32.65 O
ATOM 13 C1' C B1003 54.404 99.876 88.599 1.00 35.67 C
ATOM 14 N1 C B1003 54.274 101.315 88.265 1.00 37.20 N
ATOM 15 C2 C B1003 54.725 102.279 89.204 1.00 37.87 C
ATOM 16 O2 C B1003 55.235 101.903 90.271 1.00 40.88 O
ATOM 17 N3 C B1003 54.596 103.587 88.921 1.00 36.95 N
ATOM 18 C4 C B1003 54.054 103.967 87.767 1.00 38.83 C
ATOM 19 N4 C B1003 53.937 105.276 87.542 1.00 41.14 N
ATOM 20 C5 C B1003 53.602 103.023 86.791 1.00 37.15 C
ATOM 21 C6 C B1003 53.727 101.722 87.079 1.00 36.60 C
ATOM 22 P G B1004 54.736 95.757 90.118 1.00 38.50 P
ATOM 23 OP1 G B1004 56.106 95.680 90.656 1.00 40.96 O
ATOM 24 OP2 G B1004 54.404 95.035 88.865 1.00 38.29 O
ATOM 25 O5' G B1004 53.761 95.239 91.265 1.00 37.77 O
TER
Atoms:
C4: (51.715,103.420,96.233)
N3: (50.788,102.815,97.048)
OP1: (51.481,101.756,90.154)
OP2: (49.527,102.727,88.832)
C2: (49.739,102.032,96.660)
C1': (48.564,100.947,94.802)
C3': (47.149,101.937,93.190)
O5': (49.321,102.249,91.273)
O4': (48.936,100.462,93.524)
C5': (48.535,101.045,91.219)
P: (50.304,102.645,90.085)
C4': (47.902,100.777,92.563)
C2': (47.181,101.584,94.670)
O2': (46.223,100.608,95.004)
N1: (49.627,101.839,95.293)
O4: (52.629,104.066,96.738)
O2: (48.970,101.552,97.465)
C6: (50.504,102.445,94.423)
C5: (51.517,103.204,94.836)
O3': (45.817,102.010,92.694)
N3: (50.788,102.815,97.048)
OP1: (51.481,101.756,90.154)
OP2: (49.527,102.727,88.832)
C2: (49.739,102.032,96.660)
C1': (48.564,100.947,94.802)
C3': (47.149,101.937,93.190)
O5': (49.321,102.249,91.273)
O4': (48.936,100.462,93.524)
C5': (48.535,101.045,91.219)
P: (50.304,102.645,90.085)
C4': (47.902,100.777,92.563)
C2': (47.181,101.584,94.670)
O2': (46.223,100.608,95.004)
N1: (49.627,101.839,95.293)
O4: (52.629,104.066,96.738)
O2: (48.970,101.552,97.465)
C6: (50.504,102.445,94.423)
C5: (51.517,103.204,94.836)
O3': (45.817,102.010,92.694)
C2: (54.725,102.279,89.204)
OP1: (55.869,95.835,83.616)
OP2: (55.954,95.356,86.130)
C4: (54.054,103.967,87.767)
O5': (54.504,97.172,85.203)
C3': (53.534,97.718,88.853)
C1': (54.404,99.876,88.599)
O4': (54.839,99.148,87.465)
C5': (53.602,97.367,86.313)
P: (55.186,95.754,84.926)
O2: (55.235,101.903,90.271)
C4': (54.361,97.772,87.567)
C2': (53.132,99.172,89.052)
O2': (52.850,99.473,90.398)
N1: (54.274,101.315,88.265)
N3: (54.596,103.587,88.921)
N4: (53.937,105.276,87.542)
C6: (53.727,101.722,87.079)
C5: (53.602,103.023,86.791)
O3': (54.373,97.312,89.929)
OP1: (55.869,95.835,83.616)
OP2: (55.954,95.356,86.130)
C4: (54.054,103.967,87.767)
O5': (54.504,97.172,85.203)
C3': (53.534,97.718,88.853)
C1': (54.404,99.876,88.599)
O4': (54.839,99.148,87.465)
C5': (53.602,97.367,86.313)
P: (55.186,95.754,84.926)
O2: (55.235,101.903,90.271)
C4': (54.361,97.772,87.567)
C2': (53.132,99.172,89.052)
O2': (52.850,99.473,90.398)
N1: (54.274,101.315,88.265)
N3: (54.596,103.587,88.921)
N4: (53.937,105.276,87.542)
C6: (53.727,101.722,87.079)
C5: (53.602,103.023,86.791)
O3': (54.373,97.312,89.929)
Image (generated by PyMOL):