Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0614:01003
Extra
PDB:
ATOM 1 O3' U A 613 50.727 103.864 90.355 1.00 28.53 O
ATOM 2 P U A 614 50.243 102.352 90.077 1.00 27.36 P
ATOM 3 OP1 U A 614 51.420 101.465 90.214 1.00 26.41 O
ATOM 4 OP2 U A 614 49.463 102.336 88.818 1.00 27.82 O
ATOM 5 O5' U A 614 49.237 102.039 91.269 1.00 26.03 O
ATOM 6 C5' U A 614 48.386 100.886 91.227 1.00 24.86 C
ATOM 7 C4' U A 614 47.766 100.650 92.578 1.00 24.30 C
ATOM 8 O4' U A 614 48.797 100.339 93.541 1.00 24.37 O
ATOM 9 C3' U A 614 47.034 101.834 93.175 1.00 24.26 C
ATOM 10 O3' U A 614 45.710 101.867 92.666 1.00 24.70 O
ATOM 11 C2' U A 614 47.059 101.515 94.664 1.00 24.77 C
ATOM 12 O2' U A 614 46.084 100.558 95.013 1.00 25.15 O
ATOM 13 C1' U A 614 48.428 100.850 94.811 1.00 25.96 C
ATOM 14 N1 U A 614 49.516 101.712 95.300 1.00 28.86 N
ATOM 15 C2 U A 614 49.671 101.853 96.673 1.00 29.36 C
ATOM 16 O2 U A 614 48.907 101.371 97.483 1.00 30.59 O
ATOM 17 N3 U A 614 50.757 102.592 97.059 1.00 29.61 N
ATOM 18 C4 U A 614 51.674 103.208 96.235 1.00 30.80 C
ATOM 19 O4 U A 614 52.632 103.792 96.734 1.00 32.48 O
ATOM 20 C5 U A 614 51.424 103.058 94.834 1.00 29.49 C
ATOM 21 C6 U A 614 50.382 102.337 94.425 1.00 29.40 C
ATOM 22 P G A 615 45.073 103.249 92.169 1.00 25.84 P
ATOM 23 OP1 G A 615 43.736 102.935 91.641 1.00 26.67 O
ATOM 24 OP2 G A 615 46.058 103.923 91.298 1.00 27.40 O
ATOM 25 O5' G A 615 44.874 104.092 93.502 1.00 24.38 O
TER
ATOM 1 O3' C B1002 53.892 94.414 84.776 1.00 30.40 O
ATOM 2 P C B1003 55.017 95.562 84.854 1.00 29.36 P
ATOM 3 OP1 C B1003 55.642 95.722 83.524 1.00 33.73 O
ATOM 4 OP2 C B1003 55.865 95.220 86.017 1.00 31.83 O
ATOM 5 O5' C B1003 54.231 96.910 85.185 1.00 31.34 O
ATOM 6 C5' C B1003 53.384 97.018 86.340 1.00 33.36 C
ATOM 7 C4' C B1003 54.181 97.476 87.543 1.00 36.53 C
ATOM 8 O4' C B1003 54.652 98.848 87.369 1.00 37.12 O
ATOM 9 C3' C B1003 53.409 97.465 88.863 1.00 37.44 C
ATOM 10 O3' C B1003 54.291 97.057 89.904 1.00 37.95 O
ATOM 11 C2' C B1003 53.041 98.933 89.047 1.00 37.25 C
ATOM 12 O2' C B1003 52.812 99.273 90.396 1.00 37.35 O
ATOM 13 C1' C B1003 54.299 99.609 88.510 1.00 38.02 C
ATOM 14 N1 C B1003 54.155 101.036 88.141 1.00 40.09 N
ATOM 15 C2 C B1003 54.583 102.030 89.061 1.00 41.47 C
ATOM 16 O2 C B1003 55.071 101.688 90.150 1.00 44.30 O
ATOM 17 N3 C B1003 54.452 103.334 88.734 1.00 39.79 N
ATOM 18 C4 C B1003 53.927 103.675 87.558 1.00 40.50 C
ATOM 19 N4 C B1003 53.819 104.971 87.283 1.00 40.87 N
ATOM 20 C5 C B1003 53.489 102.699 86.609 1.00 40.47 C
ATOM 21 C6 C B1003 53.619 101.404 86.939 1.00 40.09 C
ATOM 22 P G B1004 54.633 95.496 90.092 1.00 40.38 P
ATOM 23 OP1 G B1004 56.039 95.390 90.556 1.00 42.16 O
ATOM 24 OP2 G B1004 54.220 94.774 88.862 1.00 40.28 O
ATOM 25 O5' G B1004 53.677 95.024 91.278 1.00 39.02 O
TER
ATOM 2 P U A 614 50.243 102.352 90.077 1.00 27.36 P
ATOM 3 OP1 U A 614 51.420 101.465 90.214 1.00 26.41 O
ATOM 4 OP2 U A 614 49.463 102.336 88.818 1.00 27.82 O
ATOM 5 O5' U A 614 49.237 102.039 91.269 1.00 26.03 O
ATOM 6 C5' U A 614 48.386 100.886 91.227 1.00 24.86 C
ATOM 7 C4' U A 614 47.766 100.650 92.578 1.00 24.30 C
ATOM 8 O4' U A 614 48.797 100.339 93.541 1.00 24.37 O
ATOM 9 C3' U A 614 47.034 101.834 93.175 1.00 24.26 C
ATOM 10 O3' U A 614 45.710 101.867 92.666 1.00 24.70 O
ATOM 11 C2' U A 614 47.059 101.515 94.664 1.00 24.77 C
ATOM 12 O2' U A 614 46.084 100.558 95.013 1.00 25.15 O
ATOM 13 C1' U A 614 48.428 100.850 94.811 1.00 25.96 C
ATOM 14 N1 U A 614 49.516 101.712 95.300 1.00 28.86 N
ATOM 15 C2 U A 614 49.671 101.853 96.673 1.00 29.36 C
ATOM 16 O2 U A 614 48.907 101.371 97.483 1.00 30.59 O
ATOM 17 N3 U A 614 50.757 102.592 97.059 1.00 29.61 N
ATOM 18 C4 U A 614 51.674 103.208 96.235 1.00 30.80 C
ATOM 19 O4 U A 614 52.632 103.792 96.734 1.00 32.48 O
ATOM 20 C5 U A 614 51.424 103.058 94.834 1.00 29.49 C
ATOM 21 C6 U A 614 50.382 102.337 94.425 1.00 29.40 C
ATOM 22 P G A 615 45.073 103.249 92.169 1.00 25.84 P
ATOM 23 OP1 G A 615 43.736 102.935 91.641 1.00 26.67 O
ATOM 24 OP2 G A 615 46.058 103.923 91.298 1.00 27.40 O
ATOM 25 O5' G A 615 44.874 104.092 93.502 1.00 24.38 O
TER
ATOM 1 O3' C B1002 53.892 94.414 84.776 1.00 30.40 O
ATOM 2 P C B1003 55.017 95.562 84.854 1.00 29.36 P
ATOM 3 OP1 C B1003 55.642 95.722 83.524 1.00 33.73 O
ATOM 4 OP2 C B1003 55.865 95.220 86.017 1.00 31.83 O
ATOM 5 O5' C B1003 54.231 96.910 85.185 1.00 31.34 O
ATOM 6 C5' C B1003 53.384 97.018 86.340 1.00 33.36 C
ATOM 7 C4' C B1003 54.181 97.476 87.543 1.00 36.53 C
ATOM 8 O4' C B1003 54.652 98.848 87.369 1.00 37.12 O
ATOM 9 C3' C B1003 53.409 97.465 88.863 1.00 37.44 C
ATOM 10 O3' C B1003 54.291 97.057 89.904 1.00 37.95 O
ATOM 11 C2' C B1003 53.041 98.933 89.047 1.00 37.25 C
ATOM 12 O2' C B1003 52.812 99.273 90.396 1.00 37.35 O
ATOM 13 C1' C B1003 54.299 99.609 88.510 1.00 38.02 C
ATOM 14 N1 C B1003 54.155 101.036 88.141 1.00 40.09 N
ATOM 15 C2 C B1003 54.583 102.030 89.061 1.00 41.47 C
ATOM 16 O2 C B1003 55.071 101.688 90.150 1.00 44.30 O
ATOM 17 N3 C B1003 54.452 103.334 88.734 1.00 39.79 N
ATOM 18 C4 C B1003 53.927 103.675 87.558 1.00 40.50 C
ATOM 19 N4 C B1003 53.819 104.971 87.283 1.00 40.87 N
ATOM 20 C5 C B1003 53.489 102.699 86.609 1.00 40.47 C
ATOM 21 C6 C B1003 53.619 101.404 86.939 1.00 40.09 C
ATOM 22 P G B1004 54.633 95.496 90.092 1.00 40.38 P
ATOM 23 OP1 G B1004 56.039 95.390 90.556 1.00 42.16 O
ATOM 24 OP2 G B1004 54.220 94.774 88.862 1.00 40.28 O
ATOM 25 O5' G B1004 53.677 95.024 91.278 1.00 39.02 O
TER
Atoms:
C4: (51.674,103.208,96.235)
N3: (50.757,102.592,97.059)
OP1: (51.420,101.465,90.214)
OP2: (49.463,102.336,88.818)
C2: (49.671,101.853,96.673)
C1': (48.428,100.850,94.811)
C3': (47.034,101.834,93.175)
O5': (49.237,102.039,91.269)
O4': (48.797,100.339,93.541)
C5': (48.386,100.886,91.227)
P: (50.243,102.352,90.077)
C4': (47.766,100.650,92.578)
C2': (47.059,101.515,94.664)
O2': (46.084,100.558,95.013)
N1: (49.516,101.712,95.300)
O4: (52.632,103.792,96.734)
O2: (48.907,101.371,97.483)
C6: (50.382,102.337,94.425)
C5: (51.424,103.058,94.834)
O3': (45.710,101.867,92.666)
N3: (50.757,102.592,97.059)
OP1: (51.420,101.465,90.214)
OP2: (49.463,102.336,88.818)
C2: (49.671,101.853,96.673)
C1': (48.428,100.850,94.811)
C3': (47.034,101.834,93.175)
O5': (49.237,102.039,91.269)
O4': (48.797,100.339,93.541)
C5': (48.386,100.886,91.227)
P: (50.243,102.352,90.077)
C4': (47.766,100.650,92.578)
C2': (47.059,101.515,94.664)
O2': (46.084,100.558,95.013)
N1: (49.516,101.712,95.300)
O4: (52.632,103.792,96.734)
O2: (48.907,101.371,97.483)
C6: (50.382,102.337,94.425)
C5: (51.424,103.058,94.834)
O3': (45.710,101.867,92.666)
C2: (54.583,102.030,89.061)
OP1: (55.642,95.722,83.524)
OP2: (55.865,95.220,86.017)
C4: (53.927,103.675,87.558)
O5': (54.231,96.910,85.185)
C3': (53.409,97.465,88.863)
C1': (54.299,99.609,88.510)
O4': (54.652,98.848,87.369)
C5': (53.384,97.018,86.340)
P: (55.017,95.562,84.854)
O2: (55.071,101.688,90.150)
C4': (54.181,97.476,87.543)
C2': (53.041,98.933,89.047)
O2': (52.812,99.273,90.396)
N1: (54.155,101.036,88.141)
N3: (54.452,103.334,88.734)
N4: (53.819,104.971,87.283)
C6: (53.619,101.404,86.939)
C5: (53.489,102.699,86.609)
O3': (54.291,97.057,89.904)
OP1: (55.642,95.722,83.524)
OP2: (55.865,95.220,86.017)
C4: (53.927,103.675,87.558)
O5': (54.231,96.910,85.185)
C3': (53.409,97.465,88.863)
C1': (54.299,99.609,88.510)
O4': (54.652,98.848,87.369)
C5': (53.384,97.018,86.340)
P: (55.017,95.562,84.854)
O2: (55.071,101.688,90.150)
C4': (54.181,97.476,87.543)
C2': (53.041,98.933,89.047)
O2': (52.812,99.273,90.396)
N1: (54.155,101.036,88.141)
N3: (54.452,103.334,88.734)
N4: (53.819,104.971,87.283)
C6: (53.619,101.404,86.939)
C5: (53.489,102.699,86.609)
O3': (54.291,97.057,89.904)
Image (generated by PyMOL):