Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DB3:G4:G5
Extra
PDB:
ATOM 1 O3' U A 3 27.739 111.485 120.405 1.00 21.44 O
ATOM 2 P U A 4 28.617 110.976 121.653 1.00 20.50 P
ATOM 3 OP1 U A 4 29.514 109.893 121.183 1.00 19.74 O
ATOM 4 OP2 U A 4 27.723 110.727 122.808 1.00 19.29 O
ATOM 5 O5' U A 4 29.501 112.256 121.985 1.00 20.96 O
ATOM 6 C5' U A 4 30.457 112.711 121.048 1.00 22.59 C
ATOM 7 C4' U A 4 30.746 114.163 121.262 1.00 22.98 C
ATOM 8 O4' U A 4 29.535 114.940 121.132 1.00 23.57 O
ATOM 9 C3' U A 4 31.234 114.544 122.639 1.00 23.62 C
ATOM 10 O3' U A 4 32.609 114.236 122.735 1.00 23.49 O
ATOM 11 C2' U A 4 31.000 116.047 122.627 1.00 23.23 C
ATOM 12 O2' U A 4 31.988 116.696 121.857 1.00 23.41 O
ATOM 13 C1' U A 4 29.658 116.129 121.892 1.00 24.10 C
ATOM 14 N1 U A 4 28.537 116.181 122.835 1.00 24.86 N
ATOM 15 C2 U A 4 28.206 117.412 123.364 1.00 26.79 C
ATOM 16 O2 U A 4 28.776 118.446 123.038 1.00 29.53 O
ATOM 17 N3 U A 4 27.186 117.394 124.278 1.00 26.60 N
ATOM 18 C4 U A 4 26.478 116.298 124.686 1.00 27.62 C
ATOM 19 O4 U A 4 25.529 116.449 125.443 1.00 31.19 O
ATOM 20 C5 U A 4 26.877 115.062 124.075 1.00 27.75 C
ATOM 21 C6 U A 4 27.868 115.054 123.192 1.00 24.72 C
ATOM 22 P U A 5 33.189 113.713 124.117 1.00 24.03 P
ATOM 23 OP1 U A 5 34.651 113.549 123.922 1.00 23.01 O
ATOM 24 OP2 U A 5 32.364 112.554 124.565 1.00 21.47 O
ATOM 25 O5' U A 5 32.906 114.942 125.097 1.00 24.81 O
TER
ATOM 1 O3' U B 4 32.609 114.236 122.735 1.00 23.49 O
ATOM 2 P U B 5 33.189 113.713 124.117 1.00 24.03 P
ATOM 3 OP1 U B 5 34.651 113.549 123.922 1.00 23.01 O
ATOM 4 OP2 U B 5 32.364 112.554 124.565 1.00 21.47 O
ATOM 5 O5' U B 5 32.906 114.942 125.097 1.00 24.81 O
ATOM 6 C5' U B 5 32.886 114.770 126.506 1.00 24.98 C
ATOM 7 C4' U B 5 34.237 115.118 127.092 1.00 26.55 C
ATOM 8 O4' U B 5 34.579 116.497 126.789 1.00 27.33 O
ATOM 9 C3' U B 5 34.316 115.042 128.605 1.00 27.63 C
ATOM 10 O3' U B 5 34.573 113.704 129.001 1.00 30.90 O
ATOM 11 C2' U B 5 35.501 115.947 128.912 1.00 27.66 C
ATOM 12 O2' U B 5 36.737 115.283 128.722 1.00 28.28 O
ATOM 13 C1' U B 5 35.330 117.046 127.859 1.00 28.59 C
ATOM 14 N1 U B 5 34.624 118.237 128.354 1.00 30.55 N
ATOM 15 C2 U B 5 35.330 119.129 129.149 1.00 31.34 C
ATOM 16 O2 U B 5 36.488 118.943 129.487 1.00 31.20 O
ATOM 17 N3 U B 5 34.624 120.239 129.543 1.00 32.19 N
ATOM 18 C4 U B 5 33.307 120.539 129.241 1.00 34.29 C
ATOM 19 O4 U B 5 32.828 121.617 129.610 1.00 34.60 O
ATOM 20 C5 U B 5 32.635 119.550 128.436 1.00 32.72 C
ATOM 21 C6 U B 5 33.301 118.464 128.033 1.00 32.39 C
ATOM 22 P U B 6 33.681 113.033 130.148 1.00 32.36 P
ATOM 23 OP1 U B 6 34.301 111.751 130.512 1.00 32.46 O
ATOM 24 OP2 U B 6 32.260 113.062 129.715 1.00 33.93 O
ATOM 25 O5' U B 6 33.851 114.030 131.370 1.00 38.96 O
TER
ATOM 2 P U A 4 28.617 110.976 121.653 1.00 20.50 P
ATOM 3 OP1 U A 4 29.514 109.893 121.183 1.00 19.74 O
ATOM 4 OP2 U A 4 27.723 110.727 122.808 1.00 19.29 O
ATOM 5 O5' U A 4 29.501 112.256 121.985 1.00 20.96 O
ATOM 6 C5' U A 4 30.457 112.711 121.048 1.00 22.59 C
ATOM 7 C4' U A 4 30.746 114.163 121.262 1.00 22.98 C
ATOM 8 O4' U A 4 29.535 114.940 121.132 1.00 23.57 O
ATOM 9 C3' U A 4 31.234 114.544 122.639 1.00 23.62 C
ATOM 10 O3' U A 4 32.609 114.236 122.735 1.00 23.49 O
ATOM 11 C2' U A 4 31.000 116.047 122.627 1.00 23.23 C
ATOM 12 O2' U A 4 31.988 116.696 121.857 1.00 23.41 O
ATOM 13 C1' U A 4 29.658 116.129 121.892 1.00 24.10 C
ATOM 14 N1 U A 4 28.537 116.181 122.835 1.00 24.86 N
ATOM 15 C2 U A 4 28.206 117.412 123.364 1.00 26.79 C
ATOM 16 O2 U A 4 28.776 118.446 123.038 1.00 29.53 O
ATOM 17 N3 U A 4 27.186 117.394 124.278 1.00 26.60 N
ATOM 18 C4 U A 4 26.478 116.298 124.686 1.00 27.62 C
ATOM 19 O4 U A 4 25.529 116.449 125.443 1.00 31.19 O
ATOM 20 C5 U A 4 26.877 115.062 124.075 1.00 27.75 C
ATOM 21 C6 U A 4 27.868 115.054 123.192 1.00 24.72 C
ATOM 22 P U A 5 33.189 113.713 124.117 1.00 24.03 P
ATOM 23 OP1 U A 5 34.651 113.549 123.922 1.00 23.01 O
ATOM 24 OP2 U A 5 32.364 112.554 124.565 1.00 21.47 O
ATOM 25 O5' U A 5 32.906 114.942 125.097 1.00 24.81 O
TER
ATOM 1 O3' U B 4 32.609 114.236 122.735 1.00 23.49 O
ATOM 2 P U B 5 33.189 113.713 124.117 1.00 24.03 P
ATOM 3 OP1 U B 5 34.651 113.549 123.922 1.00 23.01 O
ATOM 4 OP2 U B 5 32.364 112.554 124.565 1.00 21.47 O
ATOM 5 O5' U B 5 32.906 114.942 125.097 1.00 24.81 O
ATOM 6 C5' U B 5 32.886 114.770 126.506 1.00 24.98 C
ATOM 7 C4' U B 5 34.237 115.118 127.092 1.00 26.55 C
ATOM 8 O4' U B 5 34.579 116.497 126.789 1.00 27.33 O
ATOM 9 C3' U B 5 34.316 115.042 128.605 1.00 27.63 C
ATOM 10 O3' U B 5 34.573 113.704 129.001 1.00 30.90 O
ATOM 11 C2' U B 5 35.501 115.947 128.912 1.00 27.66 C
ATOM 12 O2' U B 5 36.737 115.283 128.722 1.00 28.28 O
ATOM 13 C1' U B 5 35.330 117.046 127.859 1.00 28.59 C
ATOM 14 N1 U B 5 34.624 118.237 128.354 1.00 30.55 N
ATOM 15 C2 U B 5 35.330 119.129 129.149 1.00 31.34 C
ATOM 16 O2 U B 5 36.488 118.943 129.487 1.00 31.20 O
ATOM 17 N3 U B 5 34.624 120.239 129.543 1.00 32.19 N
ATOM 18 C4 U B 5 33.307 120.539 129.241 1.00 34.29 C
ATOM 19 O4 U B 5 32.828 121.617 129.610 1.00 34.60 O
ATOM 20 C5 U B 5 32.635 119.550 128.436 1.00 32.72 C
ATOM 21 C6 U B 5 33.301 118.464 128.033 1.00 32.39 C
ATOM 22 P U B 6 33.681 113.033 130.148 1.00 32.36 P
ATOM 23 OP1 U B 6 34.301 111.751 130.512 1.00 32.46 O
ATOM 24 OP2 U B 6 32.260 113.062 129.715 1.00 33.93 O
ATOM 25 O5' U B 6 33.851 114.030 131.370 1.00 38.96 O
TER
Atoms:
C4: (26.478,116.298,124.686)
N3: (27.186,117.394,124.278)
OP1: (29.514,109.893,121.183)
OP2: (27.723,110.727,122.808)
C2: (28.206,117.412,123.364)
C1': (29.658,116.129,121.892)
C3': (31.234,114.544,122.639)
O5': (29.501,112.256,121.985)
O4': (29.535,114.940,121.132)
C5': (30.457,112.711,121.048)
P: (28.617,110.976,121.653)
C4': (30.746,114.163,121.262)
C2': (31.000,116.047,122.627)
O2': (31.988,116.696,121.857)
N1: (28.537,116.181,122.835)
O4: (25.529,116.449,125.443)
O2: (28.776,118.446,123.038)
C6: (27.868,115.054,123.192)
C5: (26.877,115.062,124.075)
O3': (32.609,114.236,122.735)
N3: (27.186,117.394,124.278)
OP1: (29.514,109.893,121.183)
OP2: (27.723,110.727,122.808)
C2: (28.206,117.412,123.364)
C1': (29.658,116.129,121.892)
C3': (31.234,114.544,122.639)
O5': (29.501,112.256,121.985)
O4': (29.535,114.940,121.132)
C5': (30.457,112.711,121.048)
P: (28.617,110.976,121.653)
C4': (30.746,114.163,121.262)
C2': (31.000,116.047,122.627)
O2': (31.988,116.696,121.857)
N1: (28.537,116.181,122.835)
O4: (25.529,116.449,125.443)
O2: (28.776,118.446,123.038)
C6: (27.868,115.054,123.192)
C5: (26.877,115.062,124.075)
O3': (32.609,114.236,122.735)
C4: (33.307,120.539,129.241)
N3: (34.624,120.239,129.543)
OP1: (34.651,113.549,123.922)
OP2: (32.364,112.554,124.565)
C2: (35.330,119.129,129.149)
C1': (35.330,117.046,127.859)
C3': (34.316,115.042,128.605)
O5': (32.906,114.942,125.097)
O4': (34.579,116.497,126.789)
C5': (32.886,114.770,126.506)
P: (33.189,113.713,124.117)
C4': (34.237,115.118,127.092)
C2': (35.501,115.947,128.912)
O2': (36.737,115.283,128.722)
N1: (34.624,118.237,128.354)
O4: (32.828,121.617,129.610)
O2: (36.488,118.943,129.487)
C6: (33.301,118.464,128.033)
C5: (32.635,119.550,128.436)
O3': (34.573,113.704,129.001)
N3: (34.624,120.239,129.543)
OP1: (34.651,113.549,123.922)
OP2: (32.364,112.554,124.565)
C2: (35.330,119.129,129.149)
C1': (35.330,117.046,127.859)
C3': (34.316,115.042,128.605)
O5': (32.906,114.942,125.097)
O4': (34.579,116.497,126.789)
C5': (32.886,114.770,126.506)
P: (33.189,113.713,124.117)
C4': (34.237,115.118,127.092)
C2': (35.501,115.947,128.912)
O2': (36.737,115.283,128.722)
N1: (34.624,118.237,128.354)
O4: (32.828,121.617,129.610)
O2: (36.488,118.943,129.487)
C6: (33.301,118.464,128.033)
C5: (32.635,119.550,128.436)
O3': (34.573,113.704,129.001)
Image (generated by PyMOL):