Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DB3:H3:H4
Extra
PDB:
ATOM 1 O3' U A 2 81.158 40.268 114.334 1.00 26.49 O
ATOM 2 P U A 3 82.067 38.949 114.185 1.00 25.85 P
ATOM 3 OP1 U A 3 81.212 37.824 113.734 1.00 23.12 O
ATOM 4 OP2 U A 3 82.880 38.801 115.411 1.00 25.39 O
ATOM 5 O5' U A 3 83.055 39.328 112.994 1.00 27.15 O
ATOM 6 C5' U A 3 82.562 39.524 111.681 1.00 25.78 C
ATOM 7 C4' U A 3 83.532 40.347 110.883 1.00 28.42 C
ATOM 8 O4' U A 3 83.754 41.617 111.547 1.00 28.96 O
ATOM 9 C3' U A 3 84.939 39.784 110.762 1.00 29.37 C
ATOM 10 O3' U A 3 84.978 38.795 109.743 1.00 33.08 O
ATOM 11 C2' U A 3 85.736 41.027 110.376 1.00 28.12 C
ATOM 12 O2' U A 3 85.580 41.372 109.024 1.00 26.37 O
ATOM 13 C1' U A 3 85.054 42.095 111.228 1.00 28.53 C
ATOM 14 N1 U A 3 85.783 42.355 112.471 1.00 28.85 N
ATOM 15 C2 U A 3 86.732 43.358 112.444 1.00 30.84 C
ATOM 16 O2 U A 3 86.945 44.035 111.457 1.00 31.79 O
ATOM 17 N3 U A 3 87.421 43.541 113.614 1.00 30.56 N
ATOM 18 C4 U A 3 87.259 42.838 114.786 1.00 31.18 C
ATOM 19 O4 U A 3 88.006 43.077 115.733 1.00 32.91 O
ATOM 20 C5 U A 3 86.238 41.831 114.746 1.00 29.59 C
ATOM 21 C6 U A 3 85.553 41.630 113.613 1.00 29.42 C
ATOM 22 P U A 4 85.989 37.557 109.876 1.00 34.07 P
ATOM 23 OP1 U A 4 85.882 36.786 108.623 1.00 33.34 O
ATOM 24 OP2 U A 4 85.739 36.882 111.170 1.00 35.41 O
ATOM 25 O5' U A 4 87.409 38.268 109.959 1.00 35.67 O
TER
ATOM 1 O3' U B 3 84.978 38.795 109.743 1.00 33.08 O
ATOM 2 P U B 4 85.989 37.557 109.876 1.00 34.07 P
ATOM 3 OP1 U B 4 85.882 36.786 108.623 1.00 33.34 O
ATOM 4 OP2 U B 4 85.739 36.882 111.170 1.00 35.41 O
ATOM 5 O5' U B 4 87.409 38.268 109.959 1.00 35.67 O
ATOM 6 C5' U B 4 88.527 37.610 110.538 1.00 39.67 C
ATOM 7 C4' U B 4 89.383 37.001 109.452 1.00 43.76 C
ATOM 8 O4' U B 4 89.808 38.026 108.517 1.00 43.90 O
ATOM 9 C3' U B 4 90.683 36.367 109.912 1.00 45.16 C
ATOM 10 O3' U B 4 90.424 35.051 110.372 1.00 48.23 O
ATOM 11 C2' U B 4 91.498 36.356 108.625 1.00 44.46 C
ATOM 12 O2' U B 4 91.114 35.292 107.777 1.00 43.74 O
ATOM 13 C1' U B 4 91.073 37.680 107.984 1.00 45.13 C
ATOM 14 N1 U B 4 91.994 38.796 108.230 1.00 45.74 N
ATOM 15 C2 U B 4 93.149 38.828 107.495 1.00 46.06 C
ATOM 16 O2 U B 4 93.422 37.972 106.682 1.00 47.12 O
ATOM 17 N3 U B 4 93.971 39.898 107.743 1.00 46.53 N
ATOM 18 C4 U B 4 93.749 40.922 108.643 1.00 47.42 C
ATOM 19 O4 U B 4 94.565 41.843 108.733 1.00 47.64 O
ATOM 20 C5 U B 4 92.523 40.809 109.379 1.00 47.17 C
ATOM 21 C6 U B 4 91.709 39.773 109.151 1.00 46.60 C
ATOM 22 P U B 5 91.026 34.572 111.770 1.00 51.14 P
ATOM 23 OP1 U B 5 90.515 33.206 112.013 1.00 51.35 O
ATOM 24 OP2 U B 5 90.795 35.641 112.776 1.00 51.79 O
ATOM 25 O5' U B 5 92.592 34.510 111.502 1.00 57.06 O
TER
ATOM 2 P U A 3 82.067 38.949 114.185 1.00 25.85 P
ATOM 3 OP1 U A 3 81.212 37.824 113.734 1.00 23.12 O
ATOM 4 OP2 U A 3 82.880 38.801 115.411 1.00 25.39 O
ATOM 5 O5' U A 3 83.055 39.328 112.994 1.00 27.15 O
ATOM 6 C5' U A 3 82.562 39.524 111.681 1.00 25.78 C
ATOM 7 C4' U A 3 83.532 40.347 110.883 1.00 28.42 C
ATOM 8 O4' U A 3 83.754 41.617 111.547 1.00 28.96 O
ATOM 9 C3' U A 3 84.939 39.784 110.762 1.00 29.37 C
ATOM 10 O3' U A 3 84.978 38.795 109.743 1.00 33.08 O
ATOM 11 C2' U A 3 85.736 41.027 110.376 1.00 28.12 C
ATOM 12 O2' U A 3 85.580 41.372 109.024 1.00 26.37 O
ATOM 13 C1' U A 3 85.054 42.095 111.228 1.00 28.53 C
ATOM 14 N1 U A 3 85.783 42.355 112.471 1.00 28.85 N
ATOM 15 C2 U A 3 86.732 43.358 112.444 1.00 30.84 C
ATOM 16 O2 U A 3 86.945 44.035 111.457 1.00 31.79 O
ATOM 17 N3 U A 3 87.421 43.541 113.614 1.00 30.56 N
ATOM 18 C4 U A 3 87.259 42.838 114.786 1.00 31.18 C
ATOM 19 O4 U A 3 88.006 43.077 115.733 1.00 32.91 O
ATOM 20 C5 U A 3 86.238 41.831 114.746 1.00 29.59 C
ATOM 21 C6 U A 3 85.553 41.630 113.613 1.00 29.42 C
ATOM 22 P U A 4 85.989 37.557 109.876 1.00 34.07 P
ATOM 23 OP1 U A 4 85.882 36.786 108.623 1.00 33.34 O
ATOM 24 OP2 U A 4 85.739 36.882 111.170 1.00 35.41 O
ATOM 25 O5' U A 4 87.409 38.268 109.959 1.00 35.67 O
TER
ATOM 1 O3' U B 3 84.978 38.795 109.743 1.00 33.08 O
ATOM 2 P U B 4 85.989 37.557 109.876 1.00 34.07 P
ATOM 3 OP1 U B 4 85.882 36.786 108.623 1.00 33.34 O
ATOM 4 OP2 U B 4 85.739 36.882 111.170 1.00 35.41 O
ATOM 5 O5' U B 4 87.409 38.268 109.959 1.00 35.67 O
ATOM 6 C5' U B 4 88.527 37.610 110.538 1.00 39.67 C
ATOM 7 C4' U B 4 89.383 37.001 109.452 1.00 43.76 C
ATOM 8 O4' U B 4 89.808 38.026 108.517 1.00 43.90 O
ATOM 9 C3' U B 4 90.683 36.367 109.912 1.00 45.16 C
ATOM 10 O3' U B 4 90.424 35.051 110.372 1.00 48.23 O
ATOM 11 C2' U B 4 91.498 36.356 108.625 1.00 44.46 C
ATOM 12 O2' U B 4 91.114 35.292 107.777 1.00 43.74 O
ATOM 13 C1' U B 4 91.073 37.680 107.984 1.00 45.13 C
ATOM 14 N1 U B 4 91.994 38.796 108.230 1.00 45.74 N
ATOM 15 C2 U B 4 93.149 38.828 107.495 1.00 46.06 C
ATOM 16 O2 U B 4 93.422 37.972 106.682 1.00 47.12 O
ATOM 17 N3 U B 4 93.971 39.898 107.743 1.00 46.53 N
ATOM 18 C4 U B 4 93.749 40.922 108.643 1.00 47.42 C
ATOM 19 O4 U B 4 94.565 41.843 108.733 1.00 47.64 O
ATOM 20 C5 U B 4 92.523 40.809 109.379 1.00 47.17 C
ATOM 21 C6 U B 4 91.709 39.773 109.151 1.00 46.60 C
ATOM 22 P U B 5 91.026 34.572 111.770 1.00 51.14 P
ATOM 23 OP1 U B 5 90.515 33.206 112.013 1.00 51.35 O
ATOM 24 OP2 U B 5 90.795 35.641 112.776 1.00 51.79 O
ATOM 25 O5' U B 5 92.592 34.510 111.502 1.00 57.06 O
TER
Atoms:
C4: (87.259,42.838,114.786)
N3: (87.421,43.541,113.614)
OP1: (81.212,37.824,113.734)
OP2: (82.880,38.801,115.411)
C2: (86.732,43.358,112.444)
C1': (85.054,42.095,111.228)
C3': (84.939,39.784,110.762)
O5': (83.055,39.328,112.994)
O4': (83.754,41.617,111.547)
C5': (82.562,39.524,111.681)
P: (82.067,38.949,114.185)
C4': (83.532,40.347,110.883)
C2': (85.736,41.027,110.376)
O2': (85.580,41.372,109.024)
N1: (85.783,42.355,112.471)
O4: (88.006,43.077,115.733)
O2: (86.945,44.035,111.457)
C6: (85.553,41.630,113.613)
C5: (86.238,41.831,114.746)
O3': (84.978,38.795,109.743)
N3: (87.421,43.541,113.614)
OP1: (81.212,37.824,113.734)
OP2: (82.880,38.801,115.411)
C2: (86.732,43.358,112.444)
C1': (85.054,42.095,111.228)
C3': (84.939,39.784,110.762)
O5': (83.055,39.328,112.994)
O4': (83.754,41.617,111.547)
C5': (82.562,39.524,111.681)
P: (82.067,38.949,114.185)
C4': (83.532,40.347,110.883)
C2': (85.736,41.027,110.376)
O2': (85.580,41.372,109.024)
N1: (85.783,42.355,112.471)
O4: (88.006,43.077,115.733)
O2: (86.945,44.035,111.457)
C6: (85.553,41.630,113.613)
C5: (86.238,41.831,114.746)
O3': (84.978,38.795,109.743)
C4: (93.749,40.922,108.643)
N3: (93.971,39.898,107.743)
OP1: (85.882,36.786,108.623)
OP2: (85.739,36.882,111.170)
C2: (93.149,38.828,107.495)
C1': (91.073,37.680,107.984)
C3': (90.683,36.367,109.912)
O5': (87.409,38.268,109.959)
O4': (89.808,38.026,108.517)
C5': (88.527,37.610,110.538)
P: (85.989,37.557,109.876)
C4': (89.383,37.001,109.452)
C2': (91.498,36.356,108.625)
O2': (91.114,35.292,107.777)
N1: (91.994,38.796,108.230)
O4: (94.565,41.843,108.733)
O2: (93.422,37.972,106.682)
C6: (91.709,39.773,109.151)
C5: (92.523,40.809,109.379)
O3': (90.424,35.051,110.372)
N3: (93.971,39.898,107.743)
OP1: (85.882,36.786,108.623)
OP2: (85.739,36.882,111.170)
C2: (93.149,38.828,107.495)
C1': (91.073,37.680,107.984)
C3': (90.683,36.367,109.912)
O5': (87.409,38.268,109.959)
O4': (89.808,38.026,108.517)
C5': (88.527,37.610,110.538)
P: (85.989,37.557,109.876)
C4': (89.383,37.001,109.452)
C2': (91.498,36.356,108.625)
O2': (91.114,35.292,107.777)
N1: (91.994,38.796,108.230)
O4: (94.565,41.843,108.733)
O2: (93.422,37.972,106.682)
C6: (91.709,39.773,109.151)
C5: (92.523,40.809,109.379)
O3': (90.424,35.051,110.372)
Image (generated by PyMOL):