Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DB3:F4:F5
Extra
PDB:
ATOM 1 O3' U A 3 -4.128 73.887 75.194 1.00 21.85 O
ATOM 2 P U A 4 -3.236 74.384 73.966 1.00 22.32 P
ATOM 3 OP1 U A 4 -2.315 75.416 74.507 1.00 20.69 O
ATOM 4 OP2 U A 4 -4.116 74.727 72.815 1.00 20.58 O
ATOM 5 O5' U A 4 -2.387 73.083 73.591 1.00 22.24 O
ATOM 6 C5' U A 4 -1.427 72.583 74.514 1.00 22.84 C
ATOM 7 C4' U A 4 -1.117 71.131 74.246 1.00 22.69 C
ATOM 8 O4' U A 4 -2.313 70.327 74.369 1.00 24.77 O
ATOM 9 C3' U A 4 -0.618 70.806 72.858 1.00 24.07 C
ATOM 10 O3' U A 4 0.757 71.124 72.746 1.00 22.29 O
ATOM 11 C2' U A 4 -0.877 69.309 72.771 1.00 23.82 C
ATOM 12 O2' U A 4 0.113 68.574 73.448 1.00 25.13 O
ATOM 13 C1' U A 4 -2.212 69.198 73.510 1.00 25.53 C
ATOM 14 N1 U A 4 -3.348 69.202 72.576 1.00 25.96 N
ATOM 15 C2 U A 4 -3.701 67.987 72.013 1.00 26.52 C
ATOM 16 O2 U A 4 -3.138 66.945 72.293 1.00 27.36 O
ATOM 17 N3 U A 4 -4.735 68.039 71.117 1.00 27.43 N
ATOM 18 C4 U A 4 -5.437 69.159 70.736 1.00 28.25 C
ATOM 19 O4 U A 4 -6.311 69.052 69.892 1.00 31.13 O
ATOM 20 C5 U A 4 -5.024 70.378 71.374 1.00 28.44 C
ATOM 21 C6 U A 4 -4.017 70.353 72.256 1.00 26.18 C
ATOM 22 P U A 5 1.317 71.636 71.347 1.00 24.53 P
ATOM 23 OP1 U A 5 2.785 71.754 71.471 1.00 24.44 O
ATOM 24 OP2 U A 5 0.523 72.815 70.939 1.00 22.72 O
ATOM 25 O5' U A 5 0.975 70.425 70.370 1.00 27.39 O
TER
ATOM 1 O3' U B 4 0.757 71.124 72.746 1.00 22.29 O
ATOM 2 P U B 5 1.317 71.636 71.347 1.00 24.53 P
ATOM 3 OP1 U B 5 2.785 71.754 71.471 1.00 24.44 O
ATOM 4 OP2 U B 5 0.523 72.815 70.939 1.00 22.72 O
ATOM 5 O5' U B 5 0.975 70.425 70.370 1.00 27.39 O
ATOM 6 C5' U B 5 0.964 70.600 68.956 1.00 30.32 C
ATOM 7 C4' U B 5 2.301 70.211 68.370 1.00 32.30 C
ATOM 8 O4' U B 5 2.579 68.821 68.657 1.00 33.48 O
ATOM 9 C3' U B 5 2.389 70.297 66.856 1.00 33.88 C
ATOM 10 O3' U B 5 2.714 71.625 66.485 1.00 35.34 O
ATOM 11 C2' U B 5 3.539 69.346 66.538 1.00 34.40 C
ATOM 12 O2' U B 5 4.825 69.916 66.680 1.00 34.83 O
ATOM 13 C1' U B 5 3.351 68.269 67.602 1.00 34.82 C
ATOM 14 N1 U B 5 2.650 67.095 67.079 1.00 36.98 N
ATOM 15 C2 U B 5 3.340 66.276 66.213 1.00 37.84 C
ATOM 16 O2 U B 5 4.493 66.495 65.865 1.00 37.50 O
ATOM 17 N3 U B 5 2.634 65.193 65.764 1.00 39.23 N
ATOM 18 C4 U B 5 1.335 64.860 66.082 1.00 40.71 C
ATOM 19 O4 U B 5 0.828 63.863 65.576 1.00 42.06 O
ATOM 20 C5 U B 5 0.689 65.761 66.983 1.00 40.09 C
ATOM 21 C6 U B 5 1.353 66.821 67.439 1.00 39.19 C
ATOM 22 P U B 6 1.860 72.371 65.358 1.00 37.88 P
ATOM 23 OP1 U B 6 2.509 73.692 65.132 1.00 37.48 O
ATOM 24 OP2 U B 6 0.438 72.310 65.756 1.00 36.83 O
ATOM 25 O5' U B 6 2.065 71.488 64.052 1.00 42.20 O
TER
ATOM 2 P U A 4 -3.236 74.384 73.966 1.00 22.32 P
ATOM 3 OP1 U A 4 -2.315 75.416 74.507 1.00 20.69 O
ATOM 4 OP2 U A 4 -4.116 74.727 72.815 1.00 20.58 O
ATOM 5 O5' U A 4 -2.387 73.083 73.591 1.00 22.24 O
ATOM 6 C5' U A 4 -1.427 72.583 74.514 1.00 22.84 C
ATOM 7 C4' U A 4 -1.117 71.131 74.246 1.00 22.69 C
ATOM 8 O4' U A 4 -2.313 70.327 74.369 1.00 24.77 O
ATOM 9 C3' U A 4 -0.618 70.806 72.858 1.00 24.07 C
ATOM 10 O3' U A 4 0.757 71.124 72.746 1.00 22.29 O
ATOM 11 C2' U A 4 -0.877 69.309 72.771 1.00 23.82 C
ATOM 12 O2' U A 4 0.113 68.574 73.448 1.00 25.13 O
ATOM 13 C1' U A 4 -2.212 69.198 73.510 1.00 25.53 C
ATOM 14 N1 U A 4 -3.348 69.202 72.576 1.00 25.96 N
ATOM 15 C2 U A 4 -3.701 67.987 72.013 1.00 26.52 C
ATOM 16 O2 U A 4 -3.138 66.945 72.293 1.00 27.36 O
ATOM 17 N3 U A 4 -4.735 68.039 71.117 1.00 27.43 N
ATOM 18 C4 U A 4 -5.437 69.159 70.736 1.00 28.25 C
ATOM 19 O4 U A 4 -6.311 69.052 69.892 1.00 31.13 O
ATOM 20 C5 U A 4 -5.024 70.378 71.374 1.00 28.44 C
ATOM 21 C6 U A 4 -4.017 70.353 72.256 1.00 26.18 C
ATOM 22 P U A 5 1.317 71.636 71.347 1.00 24.53 P
ATOM 23 OP1 U A 5 2.785 71.754 71.471 1.00 24.44 O
ATOM 24 OP2 U A 5 0.523 72.815 70.939 1.00 22.72 O
ATOM 25 O5' U A 5 0.975 70.425 70.370 1.00 27.39 O
TER
ATOM 1 O3' U B 4 0.757 71.124 72.746 1.00 22.29 O
ATOM 2 P U B 5 1.317 71.636 71.347 1.00 24.53 P
ATOM 3 OP1 U B 5 2.785 71.754 71.471 1.00 24.44 O
ATOM 4 OP2 U B 5 0.523 72.815 70.939 1.00 22.72 O
ATOM 5 O5' U B 5 0.975 70.425 70.370 1.00 27.39 O
ATOM 6 C5' U B 5 0.964 70.600 68.956 1.00 30.32 C
ATOM 7 C4' U B 5 2.301 70.211 68.370 1.00 32.30 C
ATOM 8 O4' U B 5 2.579 68.821 68.657 1.00 33.48 O
ATOM 9 C3' U B 5 2.389 70.297 66.856 1.00 33.88 C
ATOM 10 O3' U B 5 2.714 71.625 66.485 1.00 35.34 O
ATOM 11 C2' U B 5 3.539 69.346 66.538 1.00 34.40 C
ATOM 12 O2' U B 5 4.825 69.916 66.680 1.00 34.83 O
ATOM 13 C1' U B 5 3.351 68.269 67.602 1.00 34.82 C
ATOM 14 N1 U B 5 2.650 67.095 67.079 1.00 36.98 N
ATOM 15 C2 U B 5 3.340 66.276 66.213 1.00 37.84 C
ATOM 16 O2 U B 5 4.493 66.495 65.865 1.00 37.50 O
ATOM 17 N3 U B 5 2.634 65.193 65.764 1.00 39.23 N
ATOM 18 C4 U B 5 1.335 64.860 66.082 1.00 40.71 C
ATOM 19 O4 U B 5 0.828 63.863 65.576 1.00 42.06 O
ATOM 20 C5 U B 5 0.689 65.761 66.983 1.00 40.09 C
ATOM 21 C6 U B 5 1.353 66.821 67.439 1.00 39.19 C
ATOM 22 P U B 6 1.860 72.371 65.358 1.00 37.88 P
ATOM 23 OP1 U B 6 2.509 73.692 65.132 1.00 37.48 O
ATOM 24 OP2 U B 6 0.438 72.310 65.756 1.00 36.83 O
ATOM 25 O5' U B 6 2.065 71.488 64.052 1.00 42.20 O
TER
Atoms:
C4: (-5.437,69.159,70.736)
N3: (-4.735,68.039,71.117)
OP1: (-2.315,75.416,74.507)
OP2: (-4.116,74.727,72.815)
C2: (-3.701,67.987,72.013)
C1': (-2.212,69.198,73.510)
C3': (-0.618,70.806,72.858)
O5': (-2.387,73.083,73.591)
O4': (-2.313,70.327,74.369)
C5': (-1.427,72.583,74.514)
P: (-3.236,74.384,73.966)
C4': (-1.117,71.131,74.246)
C2': (-0.877,69.309,72.771)
O2': (0.113,68.574,73.448)
N1: (-3.348,69.202,72.576)
O4: (-6.311,69.052,69.892)
O2: (-3.138,66.945,72.293)
C6: (-4.017,70.353,72.256)
C5: (-5.024,70.378,71.374)
O3': (0.757,71.124,72.746)
N3: (-4.735,68.039,71.117)
OP1: (-2.315,75.416,74.507)
OP2: (-4.116,74.727,72.815)
C2: (-3.701,67.987,72.013)
C1': (-2.212,69.198,73.510)
C3': (-0.618,70.806,72.858)
O5': (-2.387,73.083,73.591)
O4': (-2.313,70.327,74.369)
C5': (-1.427,72.583,74.514)
P: (-3.236,74.384,73.966)
C4': (-1.117,71.131,74.246)
C2': (-0.877,69.309,72.771)
O2': (0.113,68.574,73.448)
N1: (-3.348,69.202,72.576)
O4: (-6.311,69.052,69.892)
O2: (-3.138,66.945,72.293)
C6: (-4.017,70.353,72.256)
C5: (-5.024,70.378,71.374)
O3': (0.757,71.124,72.746)
C4: (1.335,64.860,66.082)
N3: (2.634,65.193,65.764)
OP1: (2.785,71.754,71.471)
OP2: (0.523,72.815,70.939)
C2: (3.340,66.276,66.213)
C1': (3.351,68.269,67.602)
C3': (2.389,70.297,66.856)
O5': (0.975,70.425,70.370)
O4': (2.579,68.821,68.657)
C5': (0.964,70.600,68.956)
P: (1.317,71.636,71.347)
C4': (2.301,70.211,68.370)
C2': (3.539,69.346,66.538)
O2': (4.825,69.916,66.680)
N1: (2.650,67.095,67.079)
O4: (0.828,63.863,65.576)
O2: (4.493,66.495,65.865)
C6: (1.353,66.821,67.439)
C5: (0.689,65.761,66.983)
O3': (2.714,71.625,66.485)
N3: (2.634,65.193,65.764)
OP1: (2.785,71.754,71.471)
OP2: (0.523,72.815,70.939)
C2: (3.340,66.276,66.213)
C1': (3.351,68.269,67.602)
C3': (2.389,70.297,66.856)
O5': (0.975,70.425,70.370)
O4': (2.579,68.821,68.657)
C5': (0.964,70.600,68.956)
P: (1.317,71.636,71.347)
C4': (2.301,70.211,68.370)
C2': (3.539,69.346,66.538)
O2': (4.825,69.916,66.680)
N1: (2.650,67.095,67.079)
O4: (0.828,63.863,65.576)
O2: (4.493,66.495,65.865)
C6: (1.353,66.821,67.439)
C5: (0.689,65.761,66.983)
O3': (2.714,71.625,66.485)
Image (generated by PyMOL):