Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DB3:E4:E5
Extra
PDB:
ATOM 1 O3' U A 3 25.589 73.327 48.992 1.00 24.93 O
ATOM 2 P U A 4 24.655 74.625 48.833 1.00 25.20 P
ATOM 3 OP1 U A 4 25.527 75.738 48.395 1.00 27.95 O
ATOM 4 OP2 U A 4 23.880 74.769 50.072 1.00 26.98 O
ATOM 5 O5' U A 4 23.686 74.232 47.635 1.00 26.30 O
ATOM 6 C5' U A 4 24.239 73.928 46.361 1.00 28.12 C
ATOM 7 C4' U A 4 23.292 73.087 45.544 1.00 30.97 C
ATOM 8 O4' U A 4 23.082 71.791 46.160 1.00 30.89 O
ATOM 9 C3' U A 4 21.881 73.616 45.366 1.00 32.00 C
ATOM 10 O3' U A 4 21.861 74.612 44.367 1.00 34.39 O
ATOM 11 C2' U A 4 21.154 72.370 44.895 1.00 31.90 C
ATOM 12 O2' U A 4 21.448 72.087 43.545 1.00 32.81 O
ATOM 13 C1' U A 4 21.800 71.303 45.779 1.00 31.75 C
ATOM 14 N1 U A 4 21.013 71.064 46.992 1.00 31.33 N
ATOM 15 C2 U A 4 20.028 70.103 46.927 1.00 31.73 C
ATOM 16 O2 U A 4 19.793 69.480 45.924 1.00 31.20 O
ATOM 17 N3 U A 4 19.333 69.903 48.088 1.00 32.88 N
ATOM 18 C4 U A 4 19.525 70.560 49.284 1.00 33.27 C
ATOM 19 O4 U A 4 18.897 70.199 50.274 1.00 35.66 O
ATOM 20 C5 U A 4 20.554 71.552 49.262 1.00 32.63 C
ATOM 21 C6 U A 4 21.246 71.762 48.140 1.00 31.14 C
ATOM 22 P U A 5 20.788 75.800 44.455 1.00 36.00 P
ATOM 23 OP1 U A 5 20.917 76.534 43.178 1.00 37.93 O
ATOM 24 OP2 U A 5 20.936 76.536 45.728 1.00 36.13 O
ATOM 25 O5' U A 5 19.402 75.015 44.485 1.00 39.02 O
TER
ATOM 1 O3' U B 4 21.861 74.612 44.367 1.00 34.39 O
ATOM 2 P U B 5 20.788 75.800 44.455 1.00 36.00 P
ATOM 3 OP1 U B 5 20.917 76.534 43.178 1.00 37.93 O
ATOM 4 OP2 U B 5 20.936 76.536 45.728 1.00 36.13 O
ATOM 5 O5' U B 5 19.402 75.015 44.485 1.00 39.02 O
ATOM 6 C5' U B 5 18.241 75.619 45.041 1.00 41.93 C
ATOM 7 C4' U B 5 17.432 76.275 43.948 1.00 44.24 C
ATOM 8 O4' U B 5 17.025 75.262 42.998 1.00 44.34 O
ATOM 9 C3' U B 5 16.132 76.940 44.378 1.00 44.89 C
ATOM 10 O3' U B 5 16.393 78.272 44.818 1.00 46.52 O
ATOM 11 C2' U B 5 15.342 76.941 43.074 1.00 44.80 C
ATOM 12 O2' U B 5 15.758 77.989 42.223 1.00 42.41 O
ATOM 13 C1' U B 5 15.763 75.602 42.460 1.00 45.80 C
ATOM 14 N1 U B 5 14.848 74.480 42.705 1.00 47.53 N
ATOM 15 C2 U B 5 13.689 74.412 41.945 1.00 48.73 C
ATOM 16 O2 U B 5 13.384 75.261 41.132 1.00 49.63 O
ATOM 17 N3 U B 5 12.900 73.314 42.179 1.00 48.93 N
ATOM 18 C4 U B 5 13.139 72.303 43.087 1.00 50.38 C
ATOM 19 O4 U B 5 12.391 71.321 43.108 1.00 52.27 O
ATOM 20 C5 U B 5 14.340 72.463 43.858 1.00 49.39 C
ATOM 21 C6 U B 5 15.134 73.520 43.642 1.00 48.01 C
TER
ATOM 2 P U A 4 24.655 74.625 48.833 1.00 25.20 P
ATOM 3 OP1 U A 4 25.527 75.738 48.395 1.00 27.95 O
ATOM 4 OP2 U A 4 23.880 74.769 50.072 1.00 26.98 O
ATOM 5 O5' U A 4 23.686 74.232 47.635 1.00 26.30 O
ATOM 6 C5' U A 4 24.239 73.928 46.361 1.00 28.12 C
ATOM 7 C4' U A 4 23.292 73.087 45.544 1.00 30.97 C
ATOM 8 O4' U A 4 23.082 71.791 46.160 1.00 30.89 O
ATOM 9 C3' U A 4 21.881 73.616 45.366 1.00 32.00 C
ATOM 10 O3' U A 4 21.861 74.612 44.367 1.00 34.39 O
ATOM 11 C2' U A 4 21.154 72.370 44.895 1.00 31.90 C
ATOM 12 O2' U A 4 21.448 72.087 43.545 1.00 32.81 O
ATOM 13 C1' U A 4 21.800 71.303 45.779 1.00 31.75 C
ATOM 14 N1 U A 4 21.013 71.064 46.992 1.00 31.33 N
ATOM 15 C2 U A 4 20.028 70.103 46.927 1.00 31.73 C
ATOM 16 O2 U A 4 19.793 69.480 45.924 1.00 31.20 O
ATOM 17 N3 U A 4 19.333 69.903 48.088 1.00 32.88 N
ATOM 18 C4 U A 4 19.525 70.560 49.284 1.00 33.27 C
ATOM 19 O4 U A 4 18.897 70.199 50.274 1.00 35.66 O
ATOM 20 C5 U A 4 20.554 71.552 49.262 1.00 32.63 C
ATOM 21 C6 U A 4 21.246 71.762 48.140 1.00 31.14 C
ATOM 22 P U A 5 20.788 75.800 44.455 1.00 36.00 P
ATOM 23 OP1 U A 5 20.917 76.534 43.178 1.00 37.93 O
ATOM 24 OP2 U A 5 20.936 76.536 45.728 1.00 36.13 O
ATOM 25 O5' U A 5 19.402 75.015 44.485 1.00 39.02 O
TER
ATOM 1 O3' U B 4 21.861 74.612 44.367 1.00 34.39 O
ATOM 2 P U B 5 20.788 75.800 44.455 1.00 36.00 P
ATOM 3 OP1 U B 5 20.917 76.534 43.178 1.00 37.93 O
ATOM 4 OP2 U B 5 20.936 76.536 45.728 1.00 36.13 O
ATOM 5 O5' U B 5 19.402 75.015 44.485 1.00 39.02 O
ATOM 6 C5' U B 5 18.241 75.619 45.041 1.00 41.93 C
ATOM 7 C4' U B 5 17.432 76.275 43.948 1.00 44.24 C
ATOM 8 O4' U B 5 17.025 75.262 42.998 1.00 44.34 O
ATOM 9 C3' U B 5 16.132 76.940 44.378 1.00 44.89 C
ATOM 10 O3' U B 5 16.393 78.272 44.818 1.00 46.52 O
ATOM 11 C2' U B 5 15.342 76.941 43.074 1.00 44.80 C
ATOM 12 O2' U B 5 15.758 77.989 42.223 1.00 42.41 O
ATOM 13 C1' U B 5 15.763 75.602 42.460 1.00 45.80 C
ATOM 14 N1 U B 5 14.848 74.480 42.705 1.00 47.53 N
ATOM 15 C2 U B 5 13.689 74.412 41.945 1.00 48.73 C
ATOM 16 O2 U B 5 13.384 75.261 41.132 1.00 49.63 O
ATOM 17 N3 U B 5 12.900 73.314 42.179 1.00 48.93 N
ATOM 18 C4 U B 5 13.139 72.303 43.087 1.00 50.38 C
ATOM 19 O4 U B 5 12.391 71.321 43.108 1.00 52.27 O
ATOM 20 C5 U B 5 14.340 72.463 43.858 1.00 49.39 C
ATOM 21 C6 U B 5 15.134 73.520 43.642 1.00 48.01 C
TER
Atoms:
C4: (19.525,70.560,49.284)
N3: (19.333,69.903,48.088)
OP1: (25.527,75.738,48.395)
OP2: (23.880,74.769,50.072)
C2: (20.028,70.103,46.927)
C1': (21.800,71.303,45.779)
C3': (21.881,73.616,45.366)
O5': (23.686,74.232,47.635)
O4': (23.082,71.791,46.160)
C5': (24.239,73.928,46.361)
P: (24.655,74.625,48.833)
C4': (23.292,73.087,45.544)
C2': (21.154,72.370,44.895)
O2': (21.448,72.087,43.545)
N1: (21.013,71.064,46.992)
O4: (18.897,70.199,50.274)
O2: (19.793,69.480,45.924)
C6: (21.246,71.762,48.140)
C5: (20.554,71.552,49.262)
O3': (21.861,74.612,44.367)
N3: (19.333,69.903,48.088)
OP1: (25.527,75.738,48.395)
OP2: (23.880,74.769,50.072)
C2: (20.028,70.103,46.927)
C1': (21.800,71.303,45.779)
C3': (21.881,73.616,45.366)
O5': (23.686,74.232,47.635)
O4': (23.082,71.791,46.160)
C5': (24.239,73.928,46.361)
P: (24.655,74.625,48.833)
C4': (23.292,73.087,45.544)
C2': (21.154,72.370,44.895)
O2': (21.448,72.087,43.545)
N1: (21.013,71.064,46.992)
O4: (18.897,70.199,50.274)
O2: (19.793,69.480,45.924)
C6: (21.246,71.762,48.140)
C5: (20.554,71.552,49.262)
O3': (21.861,74.612,44.367)
C4: (13.139,72.303,43.087)
N3: (12.900,73.314,42.179)
OP1: (20.917,76.534,43.178)
OP2: (20.936,76.536,45.728)
C2: (13.689,74.412,41.945)
C1': (15.763,75.602,42.460)
C3': (16.132,76.940,44.378)
O5': (19.402,75.015,44.485)
O4': (17.025,75.262,42.998)
C5': (18.241,75.619,45.041)
P: (20.788,75.800,44.455)
C4': (17.432,76.275,43.948)
C2': (15.342,76.941,43.074)
O2': (15.758,77.989,42.223)
N1: (14.848,74.480,42.705)
O4: (12.391,71.321,43.108)
O2: (13.384,75.261,41.132)
C6: (15.134,73.520,43.642)
C5: (14.340,72.463,43.858)
O3': (16.393,78.272,44.818)
N3: (12.900,73.314,42.179)
OP1: (20.917,76.534,43.178)
OP2: (20.936,76.536,45.728)
C2: (13.689,74.412,41.945)
C1': (15.763,75.602,42.460)
C3': (16.132,76.940,44.378)
O5': (19.402,75.015,44.485)
O4': (17.025,75.262,42.998)
C5': (18.241,75.619,45.041)
P: (20.788,75.800,44.455)
C4': (17.432,76.275,43.948)
C2': (15.342,76.941,43.074)
O2': (15.758,77.989,42.223)
N1: (14.848,74.480,42.705)
O4: (12.391,71.321,43.108)
O2: (13.384,75.261,41.132)
C6: (15.134,73.520,43.642)
C5: (14.340,72.463,43.858)
O3': (16.393,78.272,44.818)
Image (generated by PyMOL):